Guide to the Human Genome
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Name: OLFML2B Sequence: fasta or formatted (750aa) NCBI GI: 46195719
Description:

olfactomedin-like 2B

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         63           4
 C cysteine            1.6         12           1
 D aspartate           6.1         46           2
 E glutamate           7.2         54           3
 F phenylalanine       2.4         18           2
 G glycine             4.9         37           1
 H histidine           1.9         14           1
 I isoleucine          4.1         31           2
 K lysine              4.0         30           1
 L leucine             8.4         63           2
 M methionine          1.5         11           1
 N asparagine          5.1         38           1
 P proline             6.1         46           2
 Q glutamine           5.1         38           2
 R arginine            5.7         43           2
 S serine              6.9         52           2
 T threonine           7.9         59           2
 V valine              6.8         51           2
 W tryptophan          1.6         12           1
 Y tyrosine            4.3         32           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactomedin-like 2B 
OLFML2A               0.366   olfactomedin-like 2A 
LPHN1                 0.113   latrophilin 1 isoform 1 precursor 
LPHN1                 0.113   latrophilin 1 isoform 2 precursor 
OLFM3                 0.110   olfactomedin 3 
OLFM1                 0.109   olfactomedin related ER localized protein isoform 1 ...
LPHN2                 0.109   latrophilin 2 precursor 
OLFM2                 0.108   olfactomedin 2 
LPHN3                 0.108   latrophilin 3 precursor 
MYOC                  0.094   myocilin 
OLFML3                0.064   olfactomedin-like 3 
OLFML1                0.060   olfactomedin-like 1 
OLFM4                 0.056   olfactomedin 4 precursor 
GLDN                  0.055   gliomedin 
MUC2                  0.015   mucin 2 precursor 
MUC7                  0.015   mucin 7, secreted precursor 
MUC7                  0.015   mucin 7, secreted precursor 
MUC7                  0.015   mucin 7, secreted precursor 
LOC100294420          0.013   PREDICTED: similar to mucin 2 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
LOC284297             0.013   hypothetical protein LOC284297 
EP300                 0.013   E1A binding protein p300 
POLR2A                0.013   DNA-directed RNA polymerase II A 
SCAF1                 0.013   SR-related CTD-associated factor 1 
ARHGAP17              0.013   nadrin isoform 1 
ARHGAP17              0.013   nadrin isoform 2 
FLJ22184              0.012   PREDICTED: hypothetical protein LOC80164 
BRD4                  0.012   bromodomain-containing protein 4 isoform long 
TP53BP2               0.012   tumor protein p53 binding protein, 2 isoform 1 [Hom...
MUC6                  0.012   mucin 6, gastric 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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