Guide to the Human Genome
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Search of human proteins with 190194384

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190194384 spermatogenesis associated 16 [Homo sapiens]
         (569 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190194384 spermatogenesis associated 16 [Homo sapiens]            1123   0.0  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     38   0.029
gi|27262638 sperm associated antigen 1 [Homo sapiens]                  38   0.029
gi|27262636 sperm associated antigen 1 [Homo sapiens]                  38   0.029
gi|4507711 tetratricopeptide repeat domain 1 [Homo sapiens]            35   0.24 
gi|153945728 microtubule-associated protein 1B [Homo sapiens]          34   0.41 
gi|154277120 spectrin repeat containing, nuclear envelope 1 isof...    33   0.54 
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof...    33   0.54 
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    33   0.54 
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    33   0.54 
gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo sa...    33   0.92 
gi|34452681 ring finger protein 10 [Homo sapiens]                      33   0.92 
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]         32   1.2  
gi|41872583 Rho-associated, coiled-coil containing protein kinas...    32   1.2  
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]                32   1.2  
gi|95147536 amyloid beta precursor protein-binding, family B, me...    32   1.2  
gi|40538794 coiled-coil domain containing 21 [Homo sapiens]            32   1.2  
gi|119120894 Dmx-like 2 [Homo sapiens]                                 31   2.7  
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...    31   3.5  
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...    31   3.5  
gi|33469919 minichromosome maintenance complex component 4 [Homo...    31   3.5  
gi|33469917 minichromosome maintenance complex component 4 [Homo...    31   3.5  
gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]         31   3.5  
gi|19923193 heat shock 70kD protein binding protein [Homo sapiens]     31   3.5  
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...    30   4.6  
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       30   4.6  
gi|67763814 death-inducing-protein [Homo sapiens]                      30   4.6  
gi|7662070 Ral GEF with PH domain and SH3 binding motif 1 [Homo ...    30   4.6  
gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens]            30   5.9  
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]        30   5.9  

>gi|190194384 spermatogenesis associated 16 [Homo sapiens]
          Length = 569

 Score = 1123 bits (2904), Expect = 0.0
 Identities = 569/569 (100%), Positives = 569/569 (100%)

Query: 1   MDAGSSRSLENAVNRIYHDQLVPKINTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITL 60
           MDAGSSRSLENAVNRIYHDQLVPKINTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITL
Sbjct: 1   MDAGSSRSLENAVNRIYHDQLVPKINTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITL 60

Query: 61  ERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELDNQLITMPLPHIPLKNI 120
           ERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELDNQLITMPLPHIPLKNI
Sbjct: 61  ERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELDNQLITMPLPHIPLKNI 120

Query: 121 MDVEMKLVYIDEMGVRYEFVESFMSTGSQPTCQAAEIVDPLSVHNFSFLPQIDKWLQVAL 180
           MDVEMKLVYIDEMGVRYEFVESFMSTGSQPTCQAAEIVDPLSVHNFSFLPQIDKWLQVAL
Sbjct: 121 MDVEMKLVYIDEMGVRYEFVESFMSTGSQPTCQAAEIVDPLSVHNFSFLPQIDKWLQVAL 180

Query: 181 KDASSCYRQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLVTCYLR 240
           KDASSCYRQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLVTCYLR
Sbjct: 181 KDASSCYRQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLVTCYLR 240

Query: 241 MRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAARSAMIADYMFWLGGGREE 300
           MRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAARSAMIADYMFWLGGGREE
Sbjct: 241 MRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAARSAMIADYMFWLGGGREE 300

Query: 301 SISKLIKLYWQAMIEEAITRAESFSVMYTPFATKIRADKIEKVKDAFTKTHPAYAEYMYT 360
           SISKLIKLYWQAMIEEAITRAESFSVMYTPFATKIRADKIEKVKDAFTKTHPAYAEYMYT
Sbjct: 301 SISKLIKLYWQAMIEEAITRAESFSVMYTPFATKIRADKIEKVKDAFTKTHPAYAEYMYT 360

Query: 361 DLQALHMLPQTVDWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTRE 420
           DLQALHMLPQTVDWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTRE
Sbjct: 361 DLQALHMLPQTVDWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTRE 420

Query: 421 DTVRQMETMGKRILPILDFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQ 480
           DTVRQMETMGKRILPILDFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQ
Sbjct: 421 DTVRQMETMGKRILPILDFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQ 480

Query: 481 AMAELATIPYLQDISQQEAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQL 540
           AMAELATIPYLQDISQQEAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQL
Sbjct: 481 AMAELATIPYLQDISQQEAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQL 540

Query: 541 EDSFLKTKKLRTARRQKTKMKRLQTVQQR 569
           EDSFLKTKKLRTARRQKTKMKRLQTVQQR
Sbjct: 541 EDSFLKTKKLRTARRQKTKMKRLQTVQQR 569


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 30/251 (11%)

Query: 316 EAITRAESFSVMYTPFATKIRADKIE---KVKDAFTKTHPAYAEYMYTDLQALHMLPQTV 372
           ++I +    S+  T  A K + +++E   K +D   K H A+ E +  D++      Q  
Sbjct: 737 DSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKEHQAHVENLEADIKRSEGELQQA 796

Query: 373 DWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTREDTVRQMETMGKR 432
                  Q Y      + K   + L ++  + L + TE      LT++  V ++E   K 
Sbjct: 797 SAKLDVFQSYQSATHEQTKAYEEQLAQLQQKLLDLETERIL---LTKQ--VAEVEAQKKD 851

Query: 433 ILPILDFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATI--PY 490
           +   LD                   K+Q   L+ QL++   Q+  + Q +  L  +    
Sbjct: 852 VCTELD-----------------AHKIQVQDLMQQLEK---QNSEMEQKVKSLTQVYESK 891

Query: 491 LQDISQQEAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQLEDSFLKTKKL 550
           L+D ++++ +  Q L+      L+ R    + +  + QK+   ED ++ L + +    K 
Sbjct: 892 LEDGNKEQEQTKQILVEKENMILQMREGQKKEIEILTQKLSAKEDSIHILNEEYETKFKN 951

Query: 551 RTARRQKTKMK 561
           +  + +K K K
Sbjct: 952 QEKKMEKVKQK 962


>gi|27262638 sperm associated antigen 1 [Homo sapiens]
          Length = 926

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 10/95 (10%)

Query: 187 YRQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLVTCYLRMRKPDL 246
           +R  ++A AAG++  A+ L           +    +IA   S + +    CYL+      
Sbjct: 456 FRSGQFAEAAGKYSAAIAL----------LEPAGSEIADDLSILYSNRAACYLKEGNCSG 505

Query: 247 ALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEA 281
            +   +R++ L+P   +  LR+A  +  LE+Y +A
Sbjct: 506 CIQDCNRALELHPFSMKPLLRRAMAYETLEQYGKA 540


>gi|27262636 sperm associated antigen 1 [Homo sapiens]
          Length = 926

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 10/95 (10%)

Query: 187 YRQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLVTCYLRMRKPDL 246
           +R  ++A AAG++  A+ L           +    +IA   S + +    CYL+      
Sbjct: 456 FRSGQFAEAAGKYSAAIAL----------LEPAGSEIADDLSILYSNRAACYLKEGNCSG 505

Query: 247 ALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEA 281
            +   +R++ L+P   +  LR+A  +  LE+Y +A
Sbjct: 506 CIQDCNRALELHPFSMKPLLRRAMAYETLEQYGKA 540


>gi|4507711 tetratricopeptide repeat domain 1 [Homo sapiens]
          Length = 292

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 13/101 (12%)

Query: 181 KDASSCYRQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLVTCYLR 240
           ++ +  +++  Y  A   +  ALE+C                     S + +      ++
Sbjct: 121 EEGNEQFKKGDYIEAESSYSRALEMCPSC-------------FQKERSILFSNRAAARMK 167

Query: 241 MRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEA 281
             K ++A+N   ++I LNP+Y R  LR+A ++   ++  EA
Sbjct: 168 QDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKTDKLDEA 208


>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
          Length = 2468

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 13  VNRIYHDQLVPKINTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITLERTKMTKGIKEK 72
           V ++ H +  PK+ + +K+      P    +  E K +   K+V    E + +   + EK
Sbjct: 568 VTKVNHVEKPPKVESKEKVMVKKDKP----IKTETKPSVTEKEVPSKEEPSPVKAEVAEK 623

Query: 73  QSNDLEKAAFKRKA---EGEEKPTRKKQAK 99
           Q+ D++  A K K    E + KP  KK+ K
Sbjct: 624 QATDVKPKAAKEKTVKKETKVKPEDKKEEK 653


>gi|154277120 spectrin repeat containing, nuclear envelope 1 isoform
           3 [Homo sapiens]
          Length = 982

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 24/117 (20%), Positives = 60/117 (51%), Gaps = 12/117 (10%)

Query: 438 DFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQ 497
           D+++S++   +FP+SSGV+    Y     +L++ +   + +++ + +      L+ I++Q
Sbjct: 175 DWLKSSERTAAFPSSSGVI----YTVAKEELKKFEAFQRQVHECLTQ------LELINKQ 224

Query: 498 EAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQLEDSFLKTKKLRTAR 554
              L +    D+  +L+   +   + W+ +QK  ++   L +L+    + ++  TAR
Sbjct: 225 YRRLARENRTDSACSLKQMVHEGNQRWDNLQK--RVTSILRRLKHFIGQREEFETAR 279


>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
            [Homo sapiens]
          Length = 3321

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 24/117 (20%), Positives = 60/117 (51%), Gaps = 12/117 (10%)

Query: 438  DFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQ 497
            D+++S++   +FP+SSGV+    Y     +L++ +   + +++ + +      L+ I++Q
Sbjct: 2537 DWLKSSERTAAFPSSSGVI----YTVAKEELKKFEAFQRQVHECLTQ------LELINKQ 2586

Query: 498  EAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQLEDSFLKTKKLRTAR 554
               L +    D+  +L+   +   + W+ +QK  ++   L +L+    + ++  TAR
Sbjct: 2587 YRRLARENRTDSACSLKQMVHEGNQRWDNLQK--RVTSILRRLKHFIGQREEFETAR 2641


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 24/117 (20%), Positives = 60/117 (51%), Gaps = 12/117 (10%)

Query: 438  DFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQ 497
            D+++S++   +FP+SSGV+    Y     +L++ +   + +++ + +      L+ I++Q
Sbjct: 7942 DWLKSSERTAAFPSSSGVI----YTVAKEELKKFEAFQRQVHECLTQ------LELINKQ 7991

Query: 498  EAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQLEDSFLKTKKLRTAR 554
               L +    D+  +L+   +   + W+ +QK  ++   L +L+    + ++  TAR
Sbjct: 7992 YRRLARENRTDSACSLKQMVHEGNQRWDNLQK--RVTSILRRLKHFIGQREEFETAR 8046


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 24/117 (20%), Positives = 60/117 (51%), Gaps = 12/117 (10%)

Query: 438  DFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQ 497
            D+++S++   +FP+SSGV+    Y     +L++ +   + +++ + +      L+ I++Q
Sbjct: 8013 DWLKSSERTAAFPSSSGVI----YTVAKEELKKFEAFQRQVHECLTQ------LELINKQ 8062

Query: 498  EAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQLEDSFLKTKKLRTAR 554
               L +    D+  +L+   +   + W+ +QK  ++   L +L+    + ++  TAR
Sbjct: 8063 YRRLARENRTDSACSLKQMVHEGNQRWDNLQK--RVTSILRRLKHFIGQREEFETAR 8117


>gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo
           sapiens]
          Length = 655

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 10/77 (12%)

Query: 396 FLEKISSRKLP-IFTEHKTPFGLTREDTVRQMETMGKRILPIL-----DFIRSTQL--NG 447
           F+ K + R++   F+  K  FG   EDTVR  +  G R+ P+L     DFIR   L   G
Sbjct: 20  FIPKTTYRRIKRCFSFRKGIFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEG 79

Query: 448 SF--PASSGVMEKLQYA 462
            F  P  + ++++LQ A
Sbjct: 80  LFRLPGQANLVKELQDA 96


>gi|34452681 ring finger protein 10 [Homo sapiens]
          Length = 811

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 57  EITLERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELDNQLITMPLPHIP 116
           E+ L+   ++K   E  S+D+EK   +R+ +  E+  R+++ +I E   Q    P  HIP
Sbjct: 577 ELALQPPVVSKETLEMFSDDIEKRKRQRQKKAREERRRERRIEIEENKKQ-GKYPEVHIP 635

Query: 117 LKNI 120
           L+N+
Sbjct: 636 LENL 639


>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
          Length = 2481

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 11/94 (11%)

Query: 188 RQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLVTCYLRMRKPDLA 247
           RQ   A   G F TA+ L ++ A+  +P +       S A          Y+++++ D A
Sbjct: 63  RQSNQACHDGDFHTAIVLYNE-ALAVDPQNCILYSNRSAA----------YMKIQQYDKA 111

Query: 248 LNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEA 281
           L+ A ++ +LNP + + + RQ    + L R+++A
Sbjct: 112 LDDAIKARLLNPKWPKAYFRQGVALQYLGRHADA 145


>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
           [Homo sapiens]
          Length = 1388

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 4/59 (6%)

Query: 55  QVEITLERT---KMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELDNQLITM 110
           Q+EITL +    ++ + I E+Q +DLEK    ++ E +E   R KQ ++TE D  + ++
Sbjct: 914 QLEITLTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMMARHKQ-ELTEKDATIASL 971


>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
          Length = 2017

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 458  KLQYASLLSQLQRVKEQSQVINQAM--AELATIPYLQDIS-QQEAELLQSLMADAMDTLE 514
            +L+ A    Q+Q+++ Q  V+ Q+   A+L      Q +  QQE E L+S  A    TLE
Sbjct: 1914 ELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLE 1973

Query: 515  GR-RNNNERVWNMIQKVGQIEDFLYQ 539
             R R + +RV  + ++V  ++  L Q
Sbjct: 1974 ARERAHRQRVRGLEEQVSTLKGQLQQ 1999


>gi|95147536 amyloid beta precursor protein-binding, family B,
           member 3 isoform c [Homo sapiens]
          Length = 491

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/64 (29%), Positives = 31/64 (48%)

Query: 176 LQVALKDASSCYRQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLV 235
           L +  KDA S      ++L   Q    + +   G+  G P  APA D A VAS  ++ ++
Sbjct: 171 LMILKKDAMSLVNPLDHSLIHCQPLVHIRVWGVGSSKGRPISAPARDFAFVASDKDSCML 230

Query: 236 TCYL 239
            C++
Sbjct: 231 KCHV 234


>gi|40538794 coiled-coil domain containing 21 [Homo sapiens]
          Length = 762

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 10/134 (7%)

Query: 24  KINTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITLERTKMTKGIKEKQSNDLEKAAFK 83
           KI+  KK+S       ++  S ++      ++V+   ER K     ++K  N+L     K
Sbjct: 409 KIDLEKKLSASEVEVQLIRESLKVALQKHSEEVKKQEERVKG----RDKHINNL-----K 459

Query: 84  RKAEGEEKPTRKKQAKITELDNQLITMPLPHIPLKNIMDVEMKLVYIDEMGVRYEFVESF 143
           +K + E +  R+KQ +I  L+  L  +P      K    ++   +   E+  +   +ES 
Sbjct: 460 KKCQKESEQNREKQQRIETLERYLADLPTLEDHQKQSQQLKDSELKSTELQEKVTELESL 519

Query: 144 MSTGSQPTCQAAEI 157
           +   +Q  C+  EI
Sbjct: 520 LEE-TQAICREKEI 532


>gi|119120894 Dmx-like 2 [Homo sapiens]
          Length = 3036

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 17/87 (19%)

Query: 164  HNFSFLPQIDKWLQVALKDASSCYRQKKYA------LAAGQFRTALELCSK-------GA 210
            HNF+     D+W + ALK+A S   ++++       L AG  + A+E+C +         
Sbjct: 1697 HNFNE----DRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAM 1752

Query: 211  VLGEPFDAPAEDIASVASFIETKLVTC 237
            V+   +++  E  ++  S +  K++ C
Sbjct: 1753 VIARLYESEFETSSTYISILNQKILGC 1779


>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
           [Homo sapiens]
          Length = 438

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 240 RMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAAR 283
           ++RK D A+     ++ L+  Y + +LR+A  +   E+Y EA R
Sbjct: 250 KLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVR 293


>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
           [Homo sapiens]
          Length = 494

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 240 RMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAAR 283
           ++RK D A+     ++ L+  Y + +LR+A  +   E+Y EA R
Sbjct: 306 KLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVR 349


>gi|33469919 minichromosome maintenance complex component 4 [Homo
           sapiens]
          Length = 863

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 12/99 (12%)

Query: 332 ATKIRAD-KIEKVKDAFTKTHPAYAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKN 390
           A  IR + ++  VK  + KTH     Y  TD + LH L +  +   F  ++  L      
Sbjct: 396 AVPIRVNPRVSNVKSVY-KTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSR 454

Query: 391 KDDGKFLEKISSRKLPIFTEHK--------TPFGLTRED 421
           K D    E+++S   P   EH+          FG TR+D
Sbjct: 455 KPD--IYERLASALAPSIYEHEDIKKGILLQLFGGTRKD 491


>gi|33469917 minichromosome maintenance complex component 4 [Homo
           sapiens]
          Length = 863

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 12/99 (12%)

Query: 332 ATKIRAD-KIEKVKDAFTKTHPAYAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKN 390
           A  IR + ++  VK  + KTH     Y  TD + LH L +  +   F  ++  L      
Sbjct: 396 AVPIRVNPRVSNVKSVY-KTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSR 454

Query: 391 KDDGKFLEKISSRKLPIFTEHK--------TPFGLTRED 421
           K D    E+++S   P   EH+          FG TR+D
Sbjct: 455 KPD--IYERLASALAPSIYEHEDIKKGILLQLFGGTRKD 491


>gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]
          Length = 953

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 20/152 (13%)

Query: 19  DQLVPKIN--TSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITLERTKMTKGIKEKQSND 76
           D  +PK+   ++ K ST A+P  +    ++ K+      + IT    K  K  KEK+  +
Sbjct: 794 DLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSIT---AKAKKKEKEKEKKE 850

Query: 77  LEKAAFKRKAEGEEKPTRKKQAKITELDNQLITMPLPHIPLKNIMDVEMKLVYIDEMGVR 136
            EK     + +  EK   K++ K  E + QL+  P        +M  ++K++ + E   R
Sbjct: 851 EEKM----EVDEAEKKEEKEKKKEPEPNFQLLDNP------ARVMPAQLKVLTMPET-CR 899

Query: 137 YEFVESFMSTG----SQPTCQAAEIVDPLSVH 164
           Y+  +     G       +    E+V+P++ H
Sbjct: 900 YQPFKPLSIGGIIILKDTSEDIEELVEPVAAH 931


>gi|19923193 heat shock 70kD protein binding protein [Homo sapiens]
          Length = 369

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 23/126 (18%)

Query: 228 SFIETKLVTCYLRMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAARSAMI 287
           + +  K  + +++++KP+ A+    R+I +NP   + +  +    R L  + EAA    +
Sbjct: 148 AILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLAL 207

Query: 288 A---DYMFWLGGGREESISKLIKLYWQAMIEEAITRAESFSVMYTPFATKIR----ADKI 340
           A   DY        +E  S        AM++E   RA+  +     +  K       ++I
Sbjct: 208 ACKLDY--------DEDAS--------AMLKEVQPRAQKIAEHRRKYERKREEREIKERI 251

Query: 341 EKVKDA 346
           E+VK A
Sbjct: 252 ERVKKA 257


>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
           protein) [Homo sapiens]
          Length = 543

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 237 CYLRMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEA 281
           CY ++ +  LAL      I L P + + + R+A     ++ Y++A
Sbjct: 403 CYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKA 447


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 26   NTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITLERTK-MTKGIKEKQSNDLEKAAFKR 84
            N    M TL   P + + S    KN  G+++E TLE +K M    KE + ND   A    
Sbjct: 1674 NRRPVMLTLLRVPRLNKNS----KNSNGQELEKTLEESKEMDIKRKENKGNDTPLAL--- 1726

Query: 85   KAEGEEKPTRKKQAKITELDNQLIT 109
            ++   EK T  ++ KI E+  Q +T
Sbjct: 1727 ESTNTEKETSLEETKIGEILIQGLT 1751


>gi|67763814 death-inducing-protein [Homo sapiens]
          Length = 578

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 457 EKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAELLQSLMADAMDTLEGR 516
           E+     L  +L R +++   + Q + E+      + ++QQ  +        A    +G 
Sbjct: 103 EETNAEMLRQELDRERQRRMELEQKVQEVLKARTEEQMAQQPPKGQAQASNGAERRSQGL 162

Query: 517 RNNNERVWNMIQKVGQ-IEDFLYQLEDSFLKTKKLRTARRQKTKMKRLQ 564
            +  ++ W   ++ G+ +EDF +Q E++ ++T++  +ARR    M+RL+
Sbjct: 163 SSRLQK-W-FYERFGEYVEDFRFQPEENTVETEEPLSARRLTENMRRLK 209


>gi|7662070 Ral GEF with PH domain and SH3 binding motif 1 [Homo
           sapiens]
          Length = 557

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 14/153 (9%)

Query: 361 DLQALHMLPQTVD-WSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTR 419
           +L  LH L   V    S P  +   T    N+ D     K +  KL      +  +  TR
Sbjct: 134 ELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKD-----KTTFEKLDYLMSKEDNYKRTR 188

Query: 420 E--DTVRQMETMGKRILPILDFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQV 477
           E   +++ + ++    + +LD I    ++ ++PAS  +ME  Q ++ ++ + R+    QV
Sbjct: 189 EYIRSLKMVPSIPYLGIYLLDLI---YIDSAYPASGSIMENEQRSNQMNNILRIIADLQV 245

Query: 478 INQAMAELATIPYLQDI--SQQEAELLQSLMAD 508
            + +   L T+P++Q    S +  E LQ  + D
Sbjct: 246 -SCSYDHLTTLPHVQKYLKSVRYIEELQKFVED 277


>gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens]
          Length = 724

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 45  QEIKKNCGGKQVEITLERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELD 104
           Q++K+  G   V +T E  ++ +  +EK+  +  KA F+   +  ++   KK  K+T + 
Sbjct: 523 QQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVT-IS 581

Query: 105 NQLITMP 111
           N+L++ P
Sbjct: 582 NRLVSSP 588


>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
          Length = 625

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 6/106 (5%)

Query: 465 LSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAEL--LQSLMADAMDTLEGRRNNNER 522
           L Q+Q  K Q   +N  M    T     ++ QQ+AE   L     D    L+     N R
Sbjct: 292 LEQIQTAKTQE--LN--MLREQTTGLAAELQQQQAEYEDLMGQKDDLNSQLQESLRANSR 347

Query: 523 VWNMIQKVGQIEDFLYQLEDSFLKTKKLRTARRQKTKMKRLQTVQQ 568
           +   +Q++GQ ++ L Q      K+ + R A   +  M+ LQ   Q
Sbjct: 348 LLEQLQEIGQEKEQLTQELQEARKSAEKRKAMLDELAMETLQEKSQ 393


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.131    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,113,907
Number of Sequences: 37866
Number of extensions: 789170
Number of successful extensions: 3005
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2971
Number of HSP's gapped (non-prelim): 68
length of query: 569
length of database: 18,247,518
effective HSP length: 108
effective length of query: 461
effective length of database: 14,157,990
effective search space: 6526833390
effective search space used: 6526833390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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