Guide to the Human Genome
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Name: GRAMD4 Sequence: fasta or formatted (578aa) NCBI GI: 67763814
Description:

death-inducing-protein

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         42           3
 C cysteine            1.2          7           2
 D aspartate           4.5         26           2
 E glutamate           8.5         49           2
 F phenylalanine       5.0         29           2
 G glycine             5.0         29           2
 H histidine           1.2          7           1
 I isoleucine          5.0         29           2
 K lysine              6.2         36           2
 L leucine            10.4         60           2
 M methionine          2.1         12           1
 N asparagine          3.6         21           1
 P proline             5.0         29           2
 Q glutamine           4.3         25           2
 R arginine            8.3         48           2
 S serine              7.1         41           2
 T threonine           4.8         28           2
 V valine              5.7         33           1
 W tryptophan          1.7         10           1
 Y tyrosine            2.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   death-inducing-protein 
MCTP2                 0.037   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP1                 0.033   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.033   multiple C2 domains, transmembrane 1 isoform L [Hom...
GRAMD2                0.022   GRAM domain containing 2 
MAP4K4                0.022   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.022   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.022   mitogen-activated protein kinase kinase kinase kinas...
TCHH                  0.017   trichohyalin 
DACH2                 0.017   dachshund 2 isoform c 
DACH2                 0.017   dachshund 2 isoform b 
DACH2                 0.017   dachshund 2 isoform a 
MCTP2                 0.016   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MAP7D1                0.015   MAP7 domain containing 1 
GIGYF2                0.014   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.014   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.014   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.014   GRB10 interacting GYF protein 2 isoform b 
TNNT3                 0.014   troponin T3, skeletal, fast isoform 3 
TNNT3                 0.014   troponin T3, skeletal, fast isoform 4 
DNAJC21               0.014   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.014   DnaJ homology subfamily A member 5 isoform 2 
LOC283685             0.013   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MAP7                  0.013   microtubule-associated protein 7 
INCENP                0.013   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.013   inner centromere protein antigens 135/155kDa isofor...
TNNT2                 0.013   troponin T type 2, cardiac isoform 4 
LOC651807             0.013   PREDICTED: hypothetical protein 
SYNE2                 0.012   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.012   spectrin repeat containing, nuclear envelope 2 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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