TTC28 14814

Name: TTC28	Sequence: fasta or formatted (2481aa)		NCBI GI: 224028289
Description: tetratricopeptide repeat domain 28		Referenced in: Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 254 2 C cysteine 1.4 34 1 D aspartate 4.3 106 2 E glutamate 6.1 151 3 F phenylalanine 2.5 61 2 G glycine 7.1 175 3 H histidine 2.9 73 2 I isoleucine 2.9 71 2 K lysine 4.8 119 2 L leucine 11.5 285 3 M methionine 2.5 61 1 N asparagine 3.7 91 2 P proline 5.3 131 3 Q glutamine 6.7 166 2 R arginine 4.7 117 4 S serine 10.6 263 4 T threonine 3.7 92 2 V valine 4.9 121 3 W tryptophan 0.5 13 1 Y tyrosine 3.9 97 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tetratricopeptide repeat domain 28 GPSM2 0.037 LGN protein GPSM1 0.036 G-protein signaling modulator 1 (AGS3-like, C. eleg... GPSM1 0.036 G-protein signaling modulator 1 (AGS3-like, C. eleg... OGT 0.016 O-linked GlcNAc transferase isoform 2 OGT 0.016 O-linked GlcNAc transferase isoform 1 RAPSN 0.013 43 kD receptor-associated protein of the synapse iso... NPHP3 0.012 nephrocystin 3 STIP1 0.012 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... NFKBIL2 0.012 NF-kappa-B inhibitor-like protein 2 SH3TC1 0.011 SH3 domain and tetratricopeptide repeats 1 RAPSN 0.011 43 kD receptor-associated protein of the synapse iso... SGTA 0.010 small glutamine-rich tetratricopeptide RPAP3 0.009 RNA polymerase II associated protein 3 isoform 2 [H... RPAP3 0.009 RNA polymerase II associated protein 3 isoform 3 [H... RPAP3 0.009 RNA polymerase II associated protein 3 isoform 1 [H... C14orf25 0.008 PREDICTED: chromosome 14 open reading frame 25 [Hom... SGTB 0.008 small glutamine-rich tetratricopeptide repeat (TPR)-... TTC6 0.008 PREDICTED: tetratricopeptide repeat domain 6 TTC6 0.008 PREDICTED: tetratricopeptide repeat domain 6 LONRF3 0.008 LON peptidase N-terminal domain and ring finger 3 is... TTC31 0.008 tetratricopeptide repeat domain 31 SH3TC2 0.008 SH3 domain and tetratricopeptide repeats 2 PPP5C 0.008 protein phosphatase 5, catalytic subunit TTC24 0.008 tetratricopeptide repeat domain 24 SPAG1 0.008 sperm associated antigen 1 SPAG1 0.008 sperm associated antigen 1 TMTC1 0.008 transmembrane and tetratricopeptide repeat containin... TTC12 0.007 tetratricopeptide repeat domain 12 MUC17 0.007 mucin 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.