Guide to the Human Genome
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Name: AUTS2 Sequence: fasta or formatted (1235aa) NCBI GI: 187829452
Description:

autism susceptibility candidate 2 isoform 2

Referenced in:

Fibroblast Growth Factors

Other entries for this name:
alt prot [1259aa] autism susceptibility candidate 2 isoform 1
alt prot [266aa] autism susceptibility candidate 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         84           3
 C cysteine            0.6          7           2
 D aspartate           5.0         62           2
 E glutamate           5.9         73           2
 F phenylalanine       3.1         38           1
 G glycine             6.0         74           4
 H histidine           6.6         82           8
 I isoleucine          2.2         27           2
 K lysine              4.8         59           3
 L leucine             7.8         96           2
 M methionine          1.5         19           2
 N asparagine          2.6         32           1
 P proline            14.2        175           5
 Q glutamine           4.4         54           2
 R arginine            7.9         97           2
 S serine             10.9        135           4
 T threonine           4.9         61           2
 V valine              3.1         38           2
 W tryptophan          0.4          5           1
 Y tyrosine            1.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   autism susceptibility candidate 2 isoform 2 
AUTS2                 0.995   autism susceptibility candidate 2 isoform 1 
FBRSL1                0.231   fibrosin-like 1 
AUTS2                 0.163   autism susceptibility candidate 2 isoform 3 
FBRS                  0.084   fibrosin 
RERE                  0.031   atrophin-1 like protein isoform b 
RERE                  0.031   atrophin-1 like protein isoform a 
RERE                  0.031   atrophin-1 like protein isoform a 
ATN1                  0.025   atrophin-1 
ATN1                  0.025   atrophin-1 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
BRD4                  0.021   bromodomain-containing protein 4 isoform long 
FLJ22184              0.020   PREDICTED: hypothetical protein LOC80164 
CCNK                  0.019   cyclin K isoform 1 
WNK2                  0.018   WNK lysine deficient protein kinase 2 
RBM33                 0.017   RNA binding motif protein 33 
FLJ22184              0.016   PREDICTED: hypothetical protein FLJ22184 
GLTSCR1               0.016   glioma tumor suppressor candidate region gene 1 [Ho...
MED15                 0.016   mediator complex subunit 15 isoform b 
SRRM1                 0.016   serine/arginine repetitive matrix 1 
RAPH1                 0.016   Ras association and pleckstrin homology domains 1 is...
SRRM2                 0.015   splicing coactivator subunit SRm300 
MLL2                  0.015   myeloid/lymphoid or mixed-lineage leukemia 2 
SFPQ                  0.015   splicing factor proline/glutamine rich (polypyrimidin...
MICALL1               0.015   molecule interacting with Rab13 
ARHGAP17              0.015   nadrin isoform 1 
PRR12                 0.015   proline rich 12 
YLPM1                 0.014   YLP motif containing 1 
WIPF3                 0.014   WAS/WASL interacting protein family, member 3 [Homo...
SETD1A                0.014   SET domain containing 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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