PABPC1L2B 522

Name: PABPC1L2B	Sequence: fasta or formatted (200aa)		NCBI GI: 109948285
Description: poly(A) binding protein, cytoplasmic 1-like 2B		Referenced in: Polyadenylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 16 1 C cysteine 1.5 3 1 D aspartate 6.0 12 1 E glutamate 7.0 14 2 F phenylalanine 5.5 11 1 G glycine 7.0 14 1 H histidine 1.5 3 1 I isoleucine 6.0 12 1 K lysine 8.0 16 1 L leucine 6.5 13 1 M methionine 2.5 5 1 N asparagine 4.5 9 1 P proline 3.5 7 1 Q glutamine 3.0 6 2 R arginine 8.0 16 2 S serine 6.5 13 1 T threonine 3.5 7 1 V valine 6.5 13 1 W tryptophan 1.0 2 1 Y tyrosine 4.0 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 poly(A) binding protein, cytoplasmic 1-like 2B [Hom... PABPC1L2A 1.000 poly(A) binding protein, cytoplasmic 1-like 2A [Homo... PABPC1 0.795 poly(A) binding protein, cytoplasmic 1 PABPC4 0.771 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.771 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.771 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC1L 0.718 poly(A)-binding protein, cytoplasmic 1-like PABPC3 0.705 poly(A) binding protein, cytoplasmic 3 PABPC4L 0.613 poly(A) binding protein, cytoplasmic 4-like PABPC5 0.555 poly(A) binding protein, cytoplasmic 5 SF3B4 0.211 splicing factor 3b, subunit 4 ELAVL2 0.176 ELAV (embryonic lethal, abnormal vision, Drosophila... ELAVL4 0.174 ELAV-like 4 isoform 1 ELAVL4 0.174 ELAV-like 4 isoform 5 ELAVL4 0.174 ELAV-like 4 isoform 4 ELAVL4 0.174 ELAV-like 4 isoform 3 ELAVL4 0.174 ELAV-like 4 isoform 2 ELAVL3 0.171 ELAV-like protein 3 isoform 1 ELAVL3 0.171 ELAV-like protein 3 isoform 2 PUF60 0.166 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.166 poly-U binding splicing factor 60KDa isoform b [Homo... PUF60 0.166 poly-U binding splicing factor 60KDa isoform a [Homo... ELAVL1 0.163 ELAV-like 1 TIA1 0.147 TIA1 protein isoform 1 TIAL1 0.147 TIA-1 related protein isoform 2 TIAL1 0.147 TIA-1 related protein isoform 1 TIA1 0.142 TIA1 protein isoform 2 RBMS1 0.137 RNA binding motif, single stranded interacting protei... RBMS1 0.137 RNA binding motif, single stranded interacting protei... RBMS3 0.129 RNA binding motif, single stranded interacting prote... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.