Guide to the Human Genome
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Name: ELAVL4 Sequence: fasta or formatted (380aa) NCBI GI: 221316765
Description:

ELAV-like 4 isoform 1

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [366aa] ELAV-like 4 isoform 2
alt prot [383aa] ELAV-like 4 isoform 3
alt prot [366aa] ELAV-like 4 isoform 4
alt prot [369aa] ELAV-like 4 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         20           2
 C cysteine            1.3          5           1
 D aspartate           3.9         15           2
 E glutamate           3.7         14           2
 F phenylalanine       4.2         16           1
 G glycine             8.2         31           1
 H histidine           1.1          4           2
 I isoleucine          6.1         23           2
 K lysine              5.5         21           1
 L leucine             7.6         29           2
 M methionine          3.2         12           1
 N asparagine          7.4         28           2
 P proline             6.3         24           2
 Q glutamine           5.0         19           1
 R arginine            5.3         20           2
 S serine              9.5         36           2
 T threonine           6.8         26           2
 V valine              6.1         23           1
 W tryptophan          0.5          2           1
 Y tyrosine            3.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELAV-like 4 isoform 1 
ELAVL4                0.945   ELAV-like 4 isoform 2 
ELAVL4                0.941   ELAV-like 4 isoform 3 
ELAVL4                0.939   ELAV-like 4 isoform 4 
ELAVL4                0.938   ELAV-like 4 isoform 5 
ELAVL2                0.838   ELAV (embryonic lethal, abnormal vision, Drosophila...
ELAVL3                0.753   ELAV-like protein 3 isoform 1 
ELAVL3                0.749   ELAV-like protein 3 isoform 2 
ELAVL1                0.616   ELAV-like 1 
RBMS1                 0.123   RNA binding motif, single stranded interacting protei...
RBMS1                 0.123   RNA binding motif, single stranded interacting protei...
RBMS3                 0.119   RNA binding motif, single stranded interacting prote...
RBMS3                 0.119   RNA binding motif, single stranded interacting prote...
RBMS3                 0.119   RNA binding motif, single stranded interacting prote...
PABPC4                0.112   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.112   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.112   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
RBMS2                 0.111   RNA binding motif, single stranded interacting protei...
PABPC1L               0.108   poly(A)-binding protein, cytoplasmic 1-like 
PABPC1                0.107   poly(A) binding protein, cytoplasmic 1 
TIA1                  0.103   TIA1 protein isoform 1 
TIAL1                 0.101   TIA-1 related protein isoform 1 
TIA1                  0.097   TIA1 protein isoform 2 
TIAL1                 0.096   TIA-1 related protein isoform 2 
PABPC1L2B             0.089   poly(A) binding protein, cytoplasmic 1-like 2B [Hom...
PABPC1L2A             0.089   poly(A) binding protein, cytoplasmic 1-like 2A [Homo...
PABPC4L               0.085   poly(A) binding protein, cytoplasmic 4-like 
SF3B4                 0.084   splicing factor 3b, subunit 4 
BRUNOL4               0.082   bruno-like 4, RNA binding protein isoform 4 
MSI1                  0.078   musashi 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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