Guide to the Human Genome
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Name: ELAVL3 Sequence: fasta or formatted (360aa) NCBI GI: 49355765
Description:

ELAV-like protein 3 isoform 2

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [367aa] ELAV-like protein 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         30           2
 C cysteine            0.8          3           1
 D aspartate           4.4         16           2
 E glutamate           3.6         13           2
 F phenylalanine       4.4         16           1
 G glycine            10.8         39           3
 H histidine           1.1          4           2
 I isoleucine          5.6         20           2
 K lysine              6.1         22           1
 L leucine             9.2         33           2
 M methionine          2.5          9           1
 N asparagine          5.6         20           2
 P proline             4.2         15           1
 Q glutamine           5.3         19           1
 R arginine            4.4         16           2
 S serine              7.5         27           2
 T threonine           6.1         22           2
 V valine              6.1         22           1
 W tryptophan          0.6          2           1
 Y tyrosine            3.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELAV-like protein 3 isoform 2 
ELAVL3                0.990   ELAV-like protein 3 isoform 1 
ELAVL4                0.818   ELAV-like 4 isoform 5 
ELAVL4                0.818   ELAV-like 4 isoform 4 
ELAVL4                0.816   ELAV-like 4 isoform 2 
ELAVL4                0.815   ELAV-like 4 isoform 3 
ELAVL2                0.806   ELAV (embryonic lethal, abnormal vision, Drosophila...
ELAVL4                0.802   ELAV-like 4 isoform 1 
ELAVL1                0.637   ELAV-like 1 
PABPC1L               0.133   poly(A)-binding protein, cytoplasmic 1-like 
PABPC4                0.123   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.123   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.123   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
RBMS1                 0.123   RNA binding motif, single stranded interacting protei...
RBMS1                 0.123   RNA binding motif, single stranded interacting protei...
PABPC1                0.117   poly(A) binding protein, cytoplasmic 1 
RBMS3                 0.116   RNA binding motif, single stranded interacting prote...
RBMS3                 0.116   RNA binding motif, single stranded interacting prote...
RBMS3                 0.116   RNA binding motif, single stranded interacting prote...
RBMS2                 0.114   RNA binding motif, single stranded interacting protei...
TIA1                  0.109   TIA1 protein isoform 1 
TIAL1                 0.109   TIA-1 related protein isoform 1 
PABPC4L               0.107   poly(A) binding protein, cytoplasmic 4-like 
PABPC3                0.104   poly(A) binding protein, cytoplasmic 3 
TIA1                  0.103   TIA1 protein isoform 2 
TIAL1                 0.103   TIA-1 related protein isoform 2 
PABPC1L2B             0.094   poly(A) binding protein, cytoplasmic 1-like 2B [Hom...
PABPC1L2A             0.094   poly(A) binding protein, cytoplasmic 1-like 2A [Homo...
PABPC5                0.091   poly(A) binding protein, cytoplasmic 5 
BRUNOL5               0.090   bruno-like 5, RNA binding protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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