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Search of human proteins with 112821688
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|112821688 G protein-regulated inducer of neurite outgrowth 2
[Homo sapiens]
(458 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|112821688 G protein-regulated inducer of neurite outgrowth 2 ... 926 0.0
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 112 9e-25
gi|112821690 G protein-regulated inducer of neurite outgrowth 3 ... 74 2e-13
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 40 0.004
gi|153792074 proline rich 12 [Homo sapiens] 39 0.008
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 39 0.013
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 39 0.013
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 39 0.013
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 38 0.022
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 38 0.022
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 37 0.029
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 37 0.029
gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 37 0.037
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 37 0.049
gi|119943102 CREB binding protein isoform b [Homo sapiens] 36 0.064
gi|119943104 CREB binding protein isoform a [Homo sapiens] 36 0.064
gi|19924099 synapsin I isoform Ia [Homo sapiens] 36 0.083
gi|19924097 synapsin I isoform Ib [Homo sapiens] 36 0.083
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 35 0.11
gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Hom... 35 0.11
gi|54607077 ankyrin repeat domain 57 [Homo sapiens] 35 0.14
gi|30795231 brain abundant, membrane attached signal protein 1 [... 35 0.19
gi|55956910 meningioma 1 [Homo sapiens] 35 0.19
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 34 0.24
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 34 0.24
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 34 0.24
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 34 0.24
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 34 0.32
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 34 0.32
gi|91208420 bassoon protein [Homo sapiens] 34 0.32
>gi|112821688 G protein-regulated inducer of neurite outgrowth 2
[Homo sapiens]
Length = 458
Score = 926 bits (2394), Expect = 0.0
Identities = 458/458 (100%), Positives = 458/458 (100%)
Query: 1 MSSSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQ 60
MSSSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQ
Sbjct: 1 MSSSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQ 60
Query: 61 APEEEGNPPESMKPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRS 120
APEEEGNPPESMKPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRS
Sbjct: 61 APEEEGNPPESMKPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRS 120
Query: 121 HSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERDLAPED 180
HSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERDLAPED
Sbjct: 121 HSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERDLAPED 180
Query: 181 ETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPPAALLCGMRE 240
ETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPPAALLCGMRE
Sbjct: 181 ETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPPAALLCGMRE 240
Query: 241 VRAGGCCHALPATGILAFPKLVASVSESGLQAQHGVKIHCRLSGGLPGHSHCCAHLWGPA 300
VRAGGCCHALPATGILAFPKLVASVSESGLQAQHGVKIHCRLSGGLPGHSHCCAHLWGPA
Sbjct: 241 VRAGGCCHALPATGILAFPKLVASVSESGLQAQHGVKIHCRLSGGLPGHSHCCAHLWGPA 300
Query: 301 GLVPEPGSRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAACKAVATSPSLEAPAAL 360
GLVPEPGSRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAACKAVATSPSLEAPAAL
Sbjct: 301 GLVPEPGSRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAACKAVATSPSLEAPAAL 360
Query: 361 HVFPEVTLGSSLEEVPSPVRDVRWDAEGMTWEVYGAAVDLEVLGVAIQKHLEMQFEQLQR 420
HVFPEVTLGSSLEEVPSPVRDVRWDAEGMTWEVYGAAVDLEVLGVAIQKHLEMQFEQLQR
Sbjct: 361 HVFPEVTLGSSLEEVPSPVRDVRWDAEGMTWEVYGAAVDLEVLGVAIQKHLEMQFEQLQR 420
Query: 421 APASEDSLSVEGRRGPLRAVMQSLRRPSCCGCSGAAPE 458
APASEDSLSVEGRRGPLRAVMQSLRRPSCCGCSGAAPE
Sbjct: 421 APASEDSLSVEGRRGPLRAVMQSLRRPSCCGCSGAAPE 458
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1 [Homo
sapiens]
Length = 1008
Score = 112 bits (279), Expect = 9e-25
Identities = 130/480 (27%), Positives = 196/480 (40%), Gaps = 75/480 (15%)
Query: 20 PLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQA-----PEEEGNPPESMKP 74
P Q S +G+ + S V LG+A P+ P E+G+P + K
Sbjct: 563 PSGQGDSVSIGKVVSTPGKTVPVPSGKVDPVSLGKAEAIPEGKVGSLPLEKGSPVTTTKA 622
Query: 75 ARASGPKARPSAGGHWWSSTVGN--VSTMGGSDLCRLRAPSAAAMQRSHSDLVRSTQMRG 132
+ KA+P +GG + G + G + L+ + A ++ R +
Sbjct: 623 DPRASGKAQPQSGGKAETKLPGQEGAAAPGEAGAVCLKKETPQASEKVDPGSCRKAEPLA 682
Query: 133 HSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERDLAPEDETSNSAWMLGAS 192
SL + S+P + + + G P LE+ LG++
Sbjct: 683 SGKGEPVSLGKA--DSAPSRKTE-----SPSLGKVVPLSLEKTKPSSSSRQLDRKALGSA 735
Query: 193 QLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPPAALLCGMREVRAGGCCH---- 248
+ A S + EPKA E +++T +L G +++ A G
Sbjct: 736 R--------SPEGARGSEGRVEPKA-EPVSSTEASSL-------GQKDLEAAGAERSPCP 779
Query: 249 --ALPATGILAFPKLVASVSESGLQAQHGVKIHCRLSGGLPGHSHCCAHLWGPAGLVPEP 306
A P G P+ + +++ +G G C + P + P+
Sbjct: 780 EAAAPPPG----PRTRDNFTKAPSWEASAPPPPREDAGTQAGAQACVSVAVSP--MSPQD 833
Query: 307 GSRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAA-CKAVATSPSLEAPAALHVFPE 365
G+ + AP SP S +DAG+Q + AA ++VAT P AA FPE
Sbjct: 834 GAGGS-----AFSFQAAPRAPSPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAFPE 888
Query: 366 VTL--GSSLE------EVPSPVRDVRWDAEGMTWEVYGAAVDLEVLGVAIQKHLEMQFEQ 417
V + GS+L E PVRDV WD +GMTWEVYGAA+++EVLG+AIQKHLE Q E+
Sbjct: 889 VRVRPGSALAAAVAPPEPAEPVRDVSWDEKGMTWEVYGAAMEVEVLGMAIQKHLERQIEE 948
Query: 418 --LQRAPASEDSLSV-EGRRGPL----------------RAVMQSLRRPSCCGCSGAAPE 458
Q APA + GR G + RA++QS+RRP CC +G E
Sbjct: 949 HGRQGAPAPPPAARAGPGRSGSVRTAPPDGAAKRPPGLFRALLQSVRRPRCCSRAGPTAE 1008
>gi|112821690 G protein-regulated inducer of neurite outgrowth 3
[Homo sapiens]
Length = 776
Score = 74.3 bits (181), Expect = 2e-13
Identities = 82/271 (30%), Positives = 108/271 (39%), Gaps = 45/271 (16%)
Query: 195 SVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPPAALLCGMREVRAGGCCHALPATG 254
S+ P + GD ++ K E T T A LL + +GG A T
Sbjct: 526 SLDPTNKGDAREKKPASPQVVKEKESTGTDTSDA---KTLLLNPKSQESGGTESAANPT- 581
Query: 255 ILAFPKLVASVSESGLQAQHGVKIHCRLSGGLPGHSHCCAHLWGPAGLVPEPGSRTKDVW 314
P + ES L+ K LS LP P G PGS K
Sbjct: 582 ----PSPIRKNQESTLEENRQTKTATSLS--LPSD---------PMG-DSSPGSGKKTPS 625
Query: 315 TMTSANDLAPAEASP-LSAQDAGVQAAPVAACKAVATSPSLEAPAALHVFPEVTLGSSLE 373
A+ P+ S L Q V AA V +P + L ++ L S
Sbjct: 626 RSVKASPRRPSRVSEFLKEQKLNV----TAAAAQVGLTPG-DKKKQLGADSKLQLKQSKR 680
Query: 374 EVPSPVRDVRWDAEGMTWEVYGAAVDLEVLGVAIQKHLEMQFEQLQ----------RAPA 423
VRDV WD +GMTWEVYGA++D E LG+AIQ HL+ Q + + R
Sbjct: 681 -----VRDVVWDEQGMTWEVYGASLDAESLGIAIQNHLQRQIREHEKLIKTQNSQTRRSI 735
Query: 424 SEDSLSVEGRRGPLRAVMQSL----RRPSCC 450
S D+ S + RG +V QS+ RRP+CC
Sbjct: 736 SSDTSSNKKLRGRQHSVFQSMLQNFRRPNCC 766
Score = 31.2 bits (69), Expect = 2.0
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 308 SRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAACKAVATSPSL 354
SR K+ TMT+ + E + QDA VQA ++V+TSPS+
Sbjct: 293 SRFKEASTMTNQAESEIKEVPSRAWQDAEVQAVASVESRSVSTSPSI 339
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 40.0 bits (92), Expect = 0.004
Identities = 51/183 (27%), Positives = 70/183 (38%), Gaps = 13/183 (7%)
Query: 176 LAPEDETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALP----P 231
+ P T AW A+ +V P G A + A P AA+ A + C A P P
Sbjct: 85 VVPSALTRAVAWRPAAAPAAVRPPAAGPPAA--APAAVCPAAADPSAASLCAASPPAAVP 142
Query: 232 AALLCGMREVRAGGCCHALPATGILAFPKLVASVSESGLQAQHGVKIHCRLSGGLPGHSH 291
AA+ +R AG AL A +P + S A + S +
Sbjct: 143 AAVPAAVRPPAAGPPAAALAA----VYPAAADPSAASLCAASPLAAVPAAASPAAVAPAA 198
Query: 292 CCAHLWGPAGLVPEPGSRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAAC-KAVAT 350
C GP+ S+ V S AP +P +A A AAP AAC ++VA
Sbjct: 199 VCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAA--ARAAAAPAAACVQSVAE 256
Query: 351 SPS 353
SP+
Sbjct: 257 SPA 259
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 39.3 bits (90), Expect = 0.008
Identities = 55/240 (22%), Positives = 80/240 (33%), Gaps = 22/240 (9%)
Query: 6 PEPGPWA------PLSPRLQPLSQSSSSLLGEGREQRPEL-----RKTASSTVWQAQLGE 54
P PGP A SP L + S +L G G P + S + Q
Sbjct: 513 PYPGPAAHSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPSHIIRPLQSPP 572
Query: 55 ASTRPQAPEEEGNPPESMKPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSA 114
A+ RP G P + + AS P P G + + G GS+L L P
Sbjct: 573 ATGRPPGVGSPGAPGKYLSSVLASAPFLAPPGAGSYAAGAGGYKGKGDGSEL--LAGPGG 630
Query: 115 AAMQRSHSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLER 174
+R+ + + + S + +G A GG+ G GG P G
Sbjct: 631 PPAERTEDEEFLIQHLLQAPSPPRTSGADGLVGEDGAADASKGLGGSGGAGG--PPGTPY 688
Query: 175 DLAPED-------ETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCH 227
+LA ED ++ L + L LG + + E LAT+ H
Sbjct: 689 ELAKEDPQRYHLQSVIRTSASLDEGATAALELGLGRLKEKKKGPERGGETPEGLATSVVH 748
Score = 30.4 bits (67), Expect = 3.5
Identities = 71/261 (27%), Positives = 85/261 (32%), Gaps = 38/261 (14%)
Query: 139 ASLSCSALGSSPVHRAQLQPGGTSGQGGQA-----PAGLERDLAPEDETSNSAWMLGASQ 193
A+ C +LG A + G G GGQA P GL L P+ G Q
Sbjct: 413 ATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGL---LGPQAYGQG----FGGGQ 465
Query: 194 LSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPPAAL---LCGMR-EVRAGGCCHA 249
DL ++S P TC + P L L G++ E G H+
Sbjct: 466 AQ----DLSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYPGPAAHS 521
Query: 250 --LPATGILAFPKLVASVSESGLQAQH--GVKIHCRLSGGLPGHSHCCAHLWGP--AGLV 303
LP A P L S S + H G GG SH L P G
Sbjct: 522 QGLPT----ASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPSHIIRPLQSPPATGRP 577
Query: 304 PEPGSRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAACKAVATSPSLEA----PAA 359
P GS ++S AP A P AG AA K L A P A
Sbjct: 578 PGVGSPGAPGKYLSSVLASAPFLAPP----GAGSYAAGAGGYKGKGDGSELLAGPGGPPA 633
Query: 360 LHVFPEVTLGSSLEEVPSPVR 380
E L L + PSP R
Sbjct: 634 ERTEDEEFLIQHLLQAPSPPR 654
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.5 bits (88), Expect = 0.013
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 22/173 (12%)
Query: 2 SSSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQA 61
S + EP P +P L P Q + P R+ A S + A +S+
Sbjct: 795 SGAPGEPQSKVPAAPPLGPPLQPPPT-------PDPTCREPAHSELLDAASSSSSS---- 843
Query: 62 PEEEGNPPESMKPAR-ASGPKARPSAGGHWWSSTVGNVSTMGGS---DLCRLRAPSAAAM 117
PP S +P R A GP+ +A G SS G + G C++ SA+ +
Sbjct: 844 ----SCPPCSPEPGREAPGPEPAAAAVG---SSMSGEGRSEKGHLYCPTCKVTVNSASQL 896
Query: 118 QRSHSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPA 170
Q ++ M G GA + S H+A+ GG G+ G +PA
Sbjct: 897 QAHNTGAKHRWMMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGRGGRQGPSPA 949
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.5 bits (88), Expect = 0.013
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 22/173 (12%)
Query: 2 SSSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQA 61
S + EP P +P L P Q + P R+ A S + A +S+
Sbjct: 795 SGAPGEPQSKVPAAPPLGPPLQPPPT-------PDPTCREPAHSELLDAASSSSSS---- 843
Query: 62 PEEEGNPPESMKPAR-ASGPKARPSAGGHWWSSTVGNVSTMGGS---DLCRLRAPSAAAM 117
PP S +P R A GP+ +A G SS G + G C++ SA+ +
Sbjct: 844 ----SCPPCSPEPGREAPGPEPAAAAVG---SSMSGEGRSEKGHLYCPTCKVTVNSASQL 896
Query: 118 QRSHSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPA 170
Q ++ M G GA + S H+A+ GG G+ G +PA
Sbjct: 897 QAHNTGAKHRWMMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGRGGRQGPSPA 949
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.5 bits (88), Expect = 0.013
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 22/173 (12%)
Query: 2 SSSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQA 61
S + EP P +P L P Q + P R+ A S + A +S+
Sbjct: 795 SGAPGEPQSKVPAAPPLGPPLQPPPT-------PDPTCREPAHSELLDAASSSSSS---- 843
Query: 62 PEEEGNPPESMKPAR-ASGPKARPSAGGHWWSSTVGNVSTMGGS---DLCRLRAPSAAAM 117
PP S +P R A GP+ +A G SS G + G C++ SA+ +
Sbjct: 844 ----SCPPCSPEPGREAPGPEPAAAAVG---SSMSGEGRSEKGHLYCPTCKVTVNSASQL 896
Query: 118 QRSHSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPA 170
Q ++ M G GA + S H+A+ GG G+ G +PA
Sbjct: 897 QAHNTGAKHRWMMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGRGGRQGPSPA 949
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 37.7 bits (86), Expect = 0.022
Identities = 51/183 (27%), Positives = 64/183 (34%), Gaps = 26/183 (14%)
Query: 6 PEPGPWAPLSPRLQPLSQSSSSLLGEGREQRP--ELRKTASSTVWQ-AQLGEASTRP--- 59
P G W RL+PL +L G Q P EL A S A GE P
Sbjct: 177 PAAGLWRAGCTRLRPLLLQPPPMLSPGLAQSPGVELHARAHSRAHTCAGGGEGDPGPIVG 236
Query: 60 QAPEEEGNPPESMKPARASGPK----ARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAA 115
PE E +P P R +GP G WS+ G S A
Sbjct: 237 GRPENEDSPRFPDVPTRPAGPSPFYCEGTEPGSQAWSARAGTASW------------ETA 284
Query: 116 AMQRSHSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERD 175
A QR D + T+ G AR + +L S + GG SG+ + PA L
Sbjct: 285 AAQR--PDQLEETRPPG--AARPGARRLRSLASRLPRGGRWLDGGGSGRLTREPASLPNP 340
Query: 176 LAP 178
+ P
Sbjct: 341 IPP 343
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 37.7 bits (86), Expect = 0.022
Identities = 51/183 (27%), Positives = 64/183 (34%), Gaps = 26/183 (14%)
Query: 6 PEPGPWAPLSPRLQPLSQSSSSLLGEGREQRP--ELRKTASSTVWQ-AQLGEASTRP--- 59
P G W RL+PL +L G Q P EL A S A GE P
Sbjct: 177 PAAGLWRAGCTRLRPLLLQPPPMLSPGLAQSPGVELHARAHSRAHTCAGGGEGDPGPIVG 236
Query: 60 QAPEEEGNPPESMKPARASGPK----ARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAA 115
PE E +P P R +GP G WS+ G S A
Sbjct: 237 GRPENEDSPRFPDVPTRPAGPSPFYCEGTEPGSQAWSARAGTASW------------ETA 284
Query: 116 AMQRSHSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERD 175
A QR D + T+ G AR + +L S + GG SG+ + PA L
Sbjct: 285 AAQR--PDQLEETRPPG--AARPGARRLRSLASRLPRGGRWLDGGGSGRLTREPASLPNP 340
Query: 176 LAP 178
+ P
Sbjct: 341 IPP 343
>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform b [Homo sapiens]
Length = 2347
Score = 37.4 bits (85), Expect = 0.029
Identities = 50/190 (26%), Positives = 66/190 (34%), Gaps = 25/190 (13%)
Query: 13 PLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAPEEEGNPPESM 72
P P +P +S + G R+ R A + + + RP A G P E
Sbjct: 2104 PWQPTAEPHGPEASPVAGGERDLRRLYSVDAQGFLDKPGRADEQWRPSAELGSGEPGE-- 2161
Query: 73 KPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRSHSDLVRSTQMRG 132
A+A GP+A P+ G S C P A S G
Sbjct: 2162 --AKAWGPEAEPALGARRKKKM---------SPPCISVEPPA----EDEGSARPSAAEGG 2206
Query: 133 HSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERDLAPEDETSNSAWMLGAS 192
+ R+ + SC A HR L+P SG GG A ER + S A L
Sbjct: 2207 STTLRRRTPSCEATP----HRDSLEPTEGSGAGGDPAAKGER----WGQASCRAEHLTVP 2258
Query: 193 QLSVPPLDLG 202
+ PLDLG
Sbjct: 2259 SFAFEPLDLG 2268
>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform a [Homo sapiens]
Length = 2353
Score = 37.4 bits (85), Expect = 0.029
Identities = 50/190 (26%), Positives = 66/190 (34%), Gaps = 25/190 (13%)
Query: 13 PLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAPEEEGNPPESM 72
P P +P +S + G R+ R A + + + RP A G P E
Sbjct: 2110 PWQPTAEPHGPEASPVAGGERDLRRLYSVDAQGFLDKPGRADEQWRPSAELGSGEPGE-- 2167
Query: 73 KPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRSHSDLVRSTQMRG 132
A+A GP+A P+ G S C P A S G
Sbjct: 2168 --AKAWGPEAEPALGARRKKKM---------SPPCISVEPPA----EDEGSARPSAAEGG 2212
Query: 133 HSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERDLAPEDETSNSAWMLGAS 192
+ R+ + SC A HR L+P SG GG A ER + S A L
Sbjct: 2213 STTLRRRTPSCEATP----HRDSLEPTEGSGAGGDPAAKGER----WGQASCRAEHLTVP 2264
Query: 193 QLSVPPLDLG 202
+ PLDLG
Sbjct: 2265 SFAFEPLDLG 2274
>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
Length = 793
Score = 37.0 bits (84), Expect = 0.037
Identities = 40/148 (27%), Positives = 55/148 (37%), Gaps = 21/148 (14%)
Query: 80 PKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRSHSDLVRSTQMRGHSGARKA 139
P A PSAGG S G R P +R + + G + AR A
Sbjct: 93 PAAAPSAGGAAPCSPRG----------ARRGEPPQQQPRRRRREKEPEEEPAG-AAARAA 141
Query: 140 SLSCSALGSSPVHRAQLQPGGTSGQGGQAP---------AGLERDLAPEDETSNSAWMLG 190
+C+ L S RA + GG+ G GQ P A A W
Sbjct: 142 DAACNGLPGSDSRRAPGKGGGSKGSPGQRPPVPAAAAAGAQARASCAAAKTQGRCCWECL 201
Query: 191 ASQLSVPPLDLGDTTAHSSSAQAEPKAA 218
+ L+V P +LG HS++A+ +P A
Sbjct: 202 QNNLAVLPGELG-ALPHSATAEEKPARA 228
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 36.6 bits (83), Expect = 0.049
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 78 SGPKARPSAGGHW-WSSTVGNVSTMGGSDLCRLRAPSAAAMQRSHSDLVRSTQ---MRGH 133
S P+ A G W+ G S GGS L P + RS +D GH
Sbjct: 1407 SKPRFEDQASGEGSWAGAGGQAS--GGSML----GPEDQSSGRSWADTADQASGGSRLGH 1460
Query: 134 -----SGARKASLSCSALGSSPVHRAQL-QPGGTSGQGGQAPAGLERDLAPEDETSNSAW 187
GA +L S GS P Q + G +G GGQA G + + PED++S +W
Sbjct: 1461 VDQSSGGAWAGTLDQSGGGSKPRFENQTTEEGSWAGAGGQAGGGSK--VGPEDQSSGRSW 1518
Query: 188 MLGASQLS 195
Q+S
Sbjct: 1519 ANSGDQIS 1526
Score = 30.0 bits (66), Expect = 4.6
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 147 GSSPVHRAQLQPGGT-SGQGGQAPAGLERDLAPEDETSNSAWMLGASQLS 195
GS P Q G+ +G GGQA G L PED++S +W A Q S
Sbjct: 1406 GSKPRFEDQASGEGSWAGAGGQASGGSM--LGPEDQSSGRSWADTADQAS 1453
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 36.2 bits (82), Expect = 0.064
Identities = 57/248 (22%), Positives = 86/248 (34%), Gaps = 35/248 (14%)
Query: 13 PLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAPEEEGNPPESM 72
P S + LS S L +G P L K A+ST + PQA ++ G S
Sbjct: 107 PNSANMASLSAMGKSPLSQGDSSAPSLPKQAASTSGPTPAASQALNPQAQKQVGLATSSP 166
Query: 73 KPARA------------SGPKARPSAGGHWW--SSTVGNVSTMGGSDLCRLRAPSAA--- 115
++ + P S GH ++ G M GS R A
Sbjct: 167 ATSQTGPGICMNANFNQTHPGLLNSNSGHSLINQASQGQAQVMNGSLGAAGRGRGAGMPY 226
Query: 116 ---AMQRSHSDLVRST------QMRGHSGARKASLSCSA-LGSSPVHRAQLQPGGTSGQG 165
AMQ + S ++ T QM GH+G A A +G + QP +G
Sbjct: 227 PTPAMQGASSSVLAETLTQVSPQMTGHAGLNTAQAGGMAKMGITGNTSPFGQPFSQAGGQ 286
Query: 166 GQAPAGLERDLAPEDETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTT 225
G+ LA + NS L P D+ +T+ + ++ + + + T
Sbjct: 287 PMGATGVNPQLASKQSMVNS--------LPTFPTDIKNTSVTNVPNMSQMQTSVGIVPTQ 338
Query: 226 CHALPPAA 233
A P A
Sbjct: 339 AIATGPTA 346
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 36.2 bits (82), Expect = 0.064
Identities = 57/248 (22%), Positives = 86/248 (34%), Gaps = 35/248 (14%)
Query: 13 PLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAPEEEGNPPESM 72
P S + LS S L +G P L K A+ST + PQA ++ G S
Sbjct: 107 PNSANMASLSAMGKSPLSQGDSSAPSLPKQAASTSGPTPAASQALNPQAQKQVGLATSSP 166
Query: 73 KPARA------------SGPKARPSAGGHWW--SSTVGNVSTMGGSDLCRLRAPSAA--- 115
++ + P S GH ++ G M GS R A
Sbjct: 167 ATSQTGPGICMNANFNQTHPGLLNSNSGHSLINQASQGQAQVMNGSLGAAGRGRGAGMPY 226
Query: 116 ---AMQRSHSDLVRST------QMRGHSGARKASLSCSA-LGSSPVHRAQLQPGGTSGQG 165
AMQ + S ++ T QM GH+G A A +G + QP +G
Sbjct: 227 PTPAMQGASSSVLAETLTQVSPQMTGHAGLNTAQAGGMAKMGITGNTSPFGQPFSQAGGQ 286
Query: 166 GQAPAGLERDLAPEDETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTT 225
G+ LA + NS L P D+ +T+ + ++ + + + T
Sbjct: 287 PMGATGVNPQLASKQSMVNS--------LPTFPTDIKNTSVTNVPNMSQMQTSVGIVPTQ 338
Query: 226 CHALPPAA 233
A P A
Sbjct: 339 AIATGPTA 346
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 35.8 bits (81), Expect = 0.083
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 12 APLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQA---PEEEGNP 68
+P S QP SQ++ G+GR+ RP V + RP A P+ + P
Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRP---------VAGGPGAPPAARPPASPSPQRQAGP 560
Query: 69 PESMKPARASGPKARPSAGG 88
P++ + SGP A P A G
Sbjct: 561 PQATRQTSVSGP-APPKASG 579
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 35.8 bits (81), Expect = 0.083
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 12 APLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQA---PEEEGNP 68
+P S QP SQ++ G+GR+ RP V + RP A P+ + P
Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRP---------VAGGPGAPPAARPPASPSPQRQAGP 560
Query: 69 PESMKPARASGPKARPSAGG 88
P++ + SGP A P A G
Sbjct: 561 PQATRQTSVSGP-APPKASG 579
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 35.4 bits (80), Expect = 0.11
Identities = 41/203 (20%), Positives = 71/203 (34%), Gaps = 15/203 (7%)
Query: 22 SQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAPEEEGNPP---------ESM 72
S+ +S LGEGR + E + + ++ T+ ++ +G PP S
Sbjct: 226 SKDTSRKLGEGRLPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPPPPPPPPPRASSK 285
Query: 73 KPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRSHSDLVRSTQMRG 132
+PA A PK PSA SS+ G+ S G S + + R +++
Sbjct: 286 RPATADSPK--PSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKA 343
Query: 133 HSGARKASLSCSALGSSPVHRAQLQ----PGGTSGQGGQAPAGLERDLAPEDETSNSAWM 188
S R+A + S+ A + S + + + D P S
Sbjct: 344 ESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSSSSSDSSSDSDFEPSQNHSQGPLR 403
Query: 189 LGASQLSVPPLDLGDTTAHSSSA 211
L D D+++ +A
Sbjct: 404 SMVEDLQSEESDEDDSSSGEEAA 426
>gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Homo
sapiens]
Length = 2063
Score = 35.4 bits (80), Expect = 0.11
Identities = 91/393 (23%), Positives = 133/393 (33%), Gaps = 81/393 (20%)
Query: 3 SSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAP 62
S P P A R P S S S L G + E ++ S + Q S P
Sbjct: 696 SPETPPTPGALRRRRKVPPSGSGGSELSNG--EAGEAYRSLSDPIPQRHRAATSEEPTGF 753
Query: 63 EEEGN-----PPESMKPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAM 117
+ N P++ PA ++ + S W +VG+ + G ++ + +
Sbjct: 754 SVDSNLLGSLSPKTGLPATSAMDEGLTSGHSDW---SVGSEESKGYQEVIQSIVQGPGTL 810
Query: 118 QRSHSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERDLA 177
R D + +K SLS P R +L G G GG+ +E L
Sbjct: 811 GRVVDDRIAG------KAPKKKSLS------DPSRRGELAGPGFEGPGGEPIREVEPMLP 858
Query: 178 PEDETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATT--TCHALPPAALL 235
P S+S +L + P + G T + + S +A P+A AT H P A +
Sbjct: 859 P----SSSEPIL--VEQRAEPEEPGATRSRAQSERALPEALPPPATAHRNFHLDPKLADI 912
Query: 236 CGMREVRAGGCCHALPATGILAFPKLVASVSESGLQAQHGVKIHC-RLSGGLPGHSHCCA 294
R +R G K A S L+ G + LS P H
Sbjct: 913 LSPRLIRRGS-------------KKRPARSSHQELRRDEGSQDQTGSLSRARPSSRH-VR 958
Query: 295 HLWGPAG----LVPEPGSRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAACKAVA- 349
H PA +VPEP P P PVA + +
Sbjct: 959 HASVPATFMPIVVPEP-----------------PTSVGP-----------PVAVPEPIGF 990
Query: 350 ---TSPSLEAPAALHVFPEVTLGSSLEEVPSPV 379
P+L+AP+ V + L EVP+PV
Sbjct: 991 PTRAHPTLQAPSLEDVTKQYMLNLHSGEVPAPV 1023
Score = 30.0 bits (66), Expect = 4.6
Identities = 52/210 (24%), Positives = 76/210 (36%), Gaps = 59/210 (28%)
Query: 19 QPLSQSSSSLLGEG-REQRPELRKTASSTVWQAQLGEASTRPQAPEEEG----------- 66
+P + SSLL + R L ++ ++ + E T P+AP EEG
Sbjct: 292 RPGLRPGSSLLDQDCRPDSDGLNLSSMNSAGVSGSPEPPTSPRAPREEGLREWGSGSPPC 351
Query: 67 --NPPESMKP-----------ARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPS 113
P E ++P A+ S P S G SS + T+ DL R
Sbjct: 352 VPGPQEGLRPMSDSVGGAFRVAKVSFPSYLASPAGSRGSSRYSSTETLKDDDLWSSRGSG 411
Query: 114 AAAMQRSHS-----DLVRS---TQMRGHSGARKA---------------SLSCSALGSSP 150
+ RS S L+RS T+ +G G +A SLS + S
Sbjct: 412 GWGVYRSPSFGAGEGLLRSQARTRAKGPGGTSRALRDGGFEPEKSRQRKSLSNPDIASET 471
Query: 151 VH-----RAQL------QPGGTSGQGGQAP 169
+ R+ L +PGG+SG G P
Sbjct: 472 LTLLSFLRSDLSELRVRKPGGSSGDRGSNP 501
>gi|54607077 ankyrin repeat domain 57 [Homo sapiens]
Length = 525
Score = 35.0 bits (79), Expect = 0.14
Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 18/165 (10%)
Query: 54 EASTRPQAPEEEGNPPESMKPARASGP-----KARPSAGGHWWSSTVGNVSTMGGSDLCR 108
EA P PE P++ P G + P A HW + G D+
Sbjct: 104 EAPDGPAGPEARDRLPDAAAPESLPGQGRELGEGEPPAPAHWPPLSAGARRKNSRRDVQP 163
Query: 109 L-RAPSAAAMQ------RSHSDLVRSTQMRGHSGARKA--SLSCSALGSSPVHRAQLQPG 159
L R P+ + + R + + G + R A +L +GSSP + + PG
Sbjct: 164 LPRTPAPGPSEDLELPPHGCEEADRGSSLVGATAQRPARQNLRDLVMGSSPQLKRSVCPG 223
Query: 160 GTS----GQGGQAPAGLERDLAPEDETSNSAWMLGASQLSVPPLD 200
G+S GG+ G + D A +S G +++ PL+
Sbjct: 224 GSSPGSSSGGGRGRGGGDSDSASVASSSAEEESSGGGSVTLDPLE 268
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 34.7 bits (78), Expect = 0.19
Identities = 45/187 (24%), Positives = 69/187 (36%), Gaps = 14/187 (7%)
Query: 7 EPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAPEEEG 66
E P A P + EG+ + E K A++ +A E A E +
Sbjct: 39 ESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKA 98
Query: 67 NPP-----ESMKPARASG---PKARPSAGGHWWSS--TVGNVSTMGGSDLCRLRAPSAAA 116
PP E P A+G PKA +A S+ G + + + AP+A A
Sbjct: 99 EPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPA 158
Query: 117 MQRSHSDLVRSTQMR-GHSGARKASLSCSALGSSPVHRAQLQPGGTSGQGGQAPAGLERD 175
Q + SD ++ + G S A +S A +P + Q S + P +E
Sbjct: 159 AQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSSTPKAQGPAAS---AEEPKPVEAP 215
Query: 176 LAPEDET 182
A D+T
Sbjct: 216 AANSDQT 222
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 34.7 bits (78), Expect = 0.19
Identities = 71/312 (22%), Positives = 104/312 (33%), Gaps = 63/312 (20%)
Query: 57 TRPQAPEEEGNPPESMKPARASGPKARPSAG-------GHWWSSTVGN----VSTMGGSD 105
T P AP G S ++ASGP P+ G + ST GN VS GG
Sbjct: 883 TAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRG 942
Query: 106 LCRLRAPSAAAMQRSHSDLVRSTQMRG-----------HSGARKASLSCSALGSSPVHRA 154
R + S + D + G SGA S +P
Sbjct: 943 RGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHE 1002
Query: 155 QLQPGGTSGQGGQAPAGLERDL-------APEDETSNSAWMLGASQLSVPPLDLGDTTAH 207
+ + G+G + G + DL A D +S + + ++S + + ++
Sbjct: 1003 KALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVSTSYANEDEVSSS 1062
Query: 208 SSSAQAEPKAAEQLATTTCHALPPAALLCGMREVRAGGCCHALPATGILAFPKLVASVSE 267
S + QA KA+ T LPP + G +A PA G+ ++
Sbjct: 1063 SDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKA-----PPPALGLGIMSNSTSTPDS 1117
Query: 268 SGLQAQHGVKIHCRLSGGLPGHSHCCAHLWGPAGLVPEPGSRTKDVWTMTSANDLAPA-E 326
G GG PGH G GL + V T TS++ P E
Sbjct: 1118 YG-------------GGGGPGHP-------GTPGL--------EQVRTPTSSSGAPPPDE 1149
Query: 327 ASPLSAQDAGVQ 338
PL A +Q
Sbjct: 1150 IHPLEILQAQIQ 1161
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 34.3 bits (77), Expect = 0.24
Identities = 49/170 (28%), Positives = 66/170 (38%), Gaps = 16/170 (9%)
Query: 191 ASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPPAALLCGMREVRAGGCCHAL 250
A+ +V P G A + A P AA A + C A P +R AG
Sbjct: 19 AAPAAVRPPAAGPPAA--APAVVYPAAAGPSAASLCAANPLVPAPAAVRPPVAGP----- 71
Query: 251 PATGILAFPKLVASVSESGLQAQHGVKIH---CRLSGGLPGHSHCCAHLWGPAGLVPEPG 307
PAT A S + L+A + + + R G + A PA + P
Sbjct: 72 PATAPAVVCPAAAGPSAASLRAANPLAVAPAAVRRPAATLGAASPAAV--APAAVCPAAA 129
Query: 308 SRTKDVWTMTSANDLAPAEASPLSAQDAGVQ---AAPVAAC-KAVATSPS 353
S + S APA ASP +A V AAP AAC ++VA SP+
Sbjct: 130 SPSAASLCAASPTAAAPAAASPAAAAPLAVNPAAAAPAAACVQSVAESPA 179
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 34.3 bits (77), Expect = 0.24
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 18/100 (18%)
Query: 3 SSRPEPGPWAPLSPRLQ---------PLSQSSSSLLGEGREQRPELRKTASST----VWQ 49
S +P P P PL P Q P S S +S +Q T++ T WQ
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQ 545
Query: 50 AQLGEASTRPQAPEEEGNP-----PESMKPARASGPKARP 84
Q A+ P AP+ +GNP P ++P G P
Sbjct: 546 QQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPP 585
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 34.3 bits (77), Expect = 0.24
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 18/100 (18%)
Query: 3 SSRPEPGPWAPLSPRLQ---------PLSQSSSSLLGEGREQRPELRKTASST----VWQ 49
S +P P P PL P Q P S S +S +Q T++ T WQ
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQ 545
Query: 50 AQLGEASTRPQAPEEEGNP-----PESMKPARASGPKARP 84
Q A+ P AP+ +GNP P ++P G P
Sbjct: 546 QQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPP 585
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 34.3 bits (77), Expect = 0.24
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 3 SSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQA- 61
S RP P P P P Q +QS G+ + P ++ S ++ G +PQ
Sbjct: 131 SHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPG----KPQGP 186
Query: 62 PEEEGNPPESMKPARASGPKARPSAGGH 89
P++EGN P+ P P+ P AGG+
Sbjct: 187 PQQEGNKPQG--PPPPGKPQGPPPAGGN 212
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.32
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 17/233 (7%)
Query: 8 PGPWAPLSPRLQPLSQSSSSLLGEGREQ-RPELRKTASSTVWQ--AQLGEASTRPQAPEE 64
P P P + P S SSLLG G P LR T+ + + S A E+
Sbjct: 202 PSPRPPATAYDAPASAFGSSLLGSGGSAFAPPLRAQDDLTLRRRPPKAWNESDLDVAYEK 261
Query: 65 EGNPPESMKPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRSHSDL 124
+ + S + A PS W + ++ +GG+ L ++A + R++
Sbjct: 262 KPSQTASYERLDVFARPASPSLQLLPWRES--SLDGLGGTGKDNL---TSATLPRNYKVS 316
Query: 125 VRSTQMRGHSGARKASLSCSALGSS------PVHRAQLQPGGTSGQGGQAPAGLERDLAP 178
++ R +G+ + SL + + PV R + P +G AP L+
Sbjct: 317 PLASDRRSDAGSYRRSLGSAGPSGTLPRSWQPVSRIPMPPSSPQPRG--APRQRPIPLSM 374
Query: 179 EDETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPP 231
+ N+ W GAS+ +P L T A Q +P+ Q + LPP
Sbjct: 375 IFKLQNAFWEHGASRAMLPGSPL-FTRAPPPKLQPQPQPQPQPQSQPQPQLPP 426
Score = 32.3 bits (72), Expect = 0.92
Identities = 46/222 (20%), Positives = 72/222 (32%), Gaps = 37/222 (16%)
Query: 16 PRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAPEEEGNPPESMKPA 75
P+LQP Q + + Q P +T T A T P E PP ++P
Sbjct: 404 PKLQPQPQPQPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTELEPE 463
Query: 76 RA---------------SGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRS 120
GP ARP + + ++ P + R
Sbjct: 464 PEIEGLLTPVLEAGDVDEGPVARPLSPTRLQPALPPEAQSV----------PELEEVARV 513
Query: 121 HSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTS---GQGGQAPAGLERDLA 177
+++ R + RG + A+ P H+ Q Q + GG P G E +L+
Sbjct: 514 LAEIPRPLKRRG------SMEQAPAVALPPTHKKQYQQIISRLFHRHGGPGPGGPEPELS 567
Query: 178 PEDETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAE 219
P E S + PP + SS +P++ E
Sbjct: 568 PITEGSEAR---AGPPAPAPPAPIPPPAPSQSSPPEQPQSME 606
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.32
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 17/233 (7%)
Query: 8 PGPWAPLSPRLQPLSQSSSSLLGEGREQ-RPELRKTASSTVWQ--AQLGEASTRPQAPEE 64
P P P + P S SSLLG G P LR T+ + + S A E+
Sbjct: 202 PSPRPPATAYDAPASAFGSSLLGSGGSAFAPPLRAQDDLTLRRRPPKAWNESDLDVAYEK 261
Query: 65 EGNPPESMKPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRSHSDL 124
+ + S + A PS W + ++ +GG+ L ++A + R++
Sbjct: 262 KPSQTASYERLDVFARPASPSLQLLPWRES--SLDGLGGTGKDNL---TSATLPRNYKVS 316
Query: 125 VRSTQMRGHSGARKASLSCSALGSS------PVHRAQLQPGGTSGQGGQAPAGLERDLAP 178
++ R +G+ + SL + + PV R + P +G AP L+
Sbjct: 317 PLASDRRSDAGSYRRSLGSAGPSGTLPRSWQPVSRIPMPPSSPQPRG--APRQRPIPLSM 374
Query: 179 EDETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAEQLATTTCHALPP 231
+ N+ W GAS+ +P L T A Q +P+ Q + LPP
Sbjct: 375 IFKLQNAFWEHGASRAMLPGSPL-FTRAPPPKLQPQPQPQPQPQSQPQPQLPP 426
Score = 32.3 bits (72), Expect = 0.92
Identities = 46/222 (20%), Positives = 72/222 (32%), Gaps = 37/222 (16%)
Query: 16 PRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAPEEEGNPPESMKPA 75
P+LQP Q + + Q P +T T A T P E PP ++P
Sbjct: 404 PKLQPQPQPQPQPQSQPQPQLPPQPQTQPQTPTPAPQHPQQTWPPVNEGPPKPPTELEPE 463
Query: 76 RA---------------SGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQRS 120
GP ARP + + ++ P + R
Sbjct: 464 PEIEGLLTPVLEAGDVDEGPVARPLSPTRLQPALPPEAQSV----------PELEEVARV 513
Query: 121 HSDLVRSTQMRGHSGARKASLSCSALGSSPVHRAQLQPGGTS---GQGGQAPAGLERDLA 177
+++ R + RG + A+ P H+ Q Q + GG P G E +L+
Sbjct: 514 LAEIPRPLKRRG------SMEQAPAVALPPTHKKQYQQIISRLFHRHGGPGPGGPEPELS 567
Query: 178 PEDETSNSAWMLGASQLSVPPLDLGDTTAHSSSAQAEPKAAE 219
P E S + PP + SS +P++ E
Sbjct: 568 PITEGSEAR---AGPPAPAPPAPIPPPAPSQSSPPEQPQSME 606
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 33.9 bits (76), Expect = 0.32
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 13/103 (12%)
Query: 298 GPAGLVPEPGSRTKDVWTMTSANDLAPAEASPLSAQDAGVQAAPVAACKAVATSPSLEAP 357
GP G P+PGSR + TS A A A P + + P A P+ EAP
Sbjct: 268 GPGG--PQPGSRQAETARATSVPGPAQAAAPPEVGRVSPQPPQPTKPSTAEPRPPAGEAP 325
Query: 358 AALHVFPEVTLGSSLEEVPSPVRDVRWDAEGMTWEVYGAAVDL 400
A S VP+ + EG+T +++G L
Sbjct: 326 A-----------KSATAVPAGLGATEQTQEGLTGKLFGLGASL 357
Score = 30.0 bits (66), Expect = 4.6
Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 29/180 (16%)
Query: 3 SSRPEPGPWAPLSPRLQPLSQSSSSLLGEGREQRPELRKTASSTVWQAQLGEASTRPQAP 62
S + GP A L + +P +Q +GR+ P +++ S + Q G AS +PQ
Sbjct: 3725 SRQAHSGP-AALQSKAEPQAQPQL----QGRQAAPGPQQSQSPSSRQIPSGAASRQPQTQ 3779
Query: 63 EEEG----NPPESMKPARASGPKARPSAGGHWWSSTVGNVSTMGGSDLCRLRAPSAAAMQ 118
+++ PP+ +++P+ G +++ G P+
Sbjct: 3780 QQQQGLGLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPP-- 3837
Query: 119 RSHSDLVRSTQMRGHSGARKASLSCSALGSSPVH-------RAQLQPGGTSGQGGQAPAG 171
R+ Q G G KA A + P +A +PGGT G APAG
Sbjct: 3838 -------RAEQTNGSKGTAKAPQQGRAPQAQPAPGPGPAGVKAGARPGGTPG----APAG 3886
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.126 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,159,352
Number of Sequences: 37866
Number of extensions: 1114484
Number of successful extensions: 4816
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 4616
Number of HSP's gapped (non-prelim): 350
length of query: 458
length of database: 18,247,518
effective HSP length: 106
effective length of query: 352
effective length of database: 14,233,722
effective search space: 5010270144
effective search space used: 5010270144
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.