Guide to the Human Genome
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Name: ARHGEF17 Sequence: fasta or formatted (2063aa) NCBI GI: 21361458
Description:

Rho guanine nucleotide exchange factor (GEF) 17

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3        172           3
 C cysteine            1.8         37           2
 D aspartate           5.3        110           3
 E glutamate           7.2        148           5
 F phenylalanine       2.3         48           1
 G glycine             8.7        180           3
 H histidine           2.2         45           2
 I isoleucine          2.5         52           2
 K lysine              3.3         68           3
 L leucine             9.5        195           3
 M methionine          1.7         36           1
 N asparagine          1.4         29           2
 P proline            10.3        212           5
 Q glutamine           4.2         87           4
 R arginine            7.7        159           4
 S serine             11.4        236           4
 T threonine           4.7         97           2
 V valine              5.0        103           2
 W tryptophan          1.1         22           1
 Y tyrosine            1.3         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho guanine nucleotide exchange factor (GEF) 17 [Hom... 
ARHGEF10              0.034   Rho guanine nucleotide exchange factor 10 
ARHGEF10L             0.033   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF10L             0.033   Rho guanine nucleotide exchange factor (GEF) 10-like...
SPAG9                 0.032   sperm associated antigen 9 isoform 1 
SPAG9                 0.032   sperm associated antigen 9 isoform 3 
MAPK8IP3              0.029   mitogen-activated protein kinase 8 interacting prote...
MAPK8IP3              0.029   mitogen-activated protein kinase 8 interacting prote...
BCR                   0.026   breakpoint cluster region isoform 2 
BCR                   0.026   breakpoint cluster region isoform 1 
PREX1                 0.021   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
ABR                   0.020   active breakpoint cluster region-related  protein i...
ABR                   0.020   active breakpoint cluster region-related  protein is...
ABR                   0.020   active breakpoint cluster region-related  protein is...
FGD1                  0.019   faciogenital dysplasia protein 
ECT2                  0.019   epithelial cell transforming sequence 2 oncogene pro...
PREX2                 0.019   DEP domain containing 2 isoform b 
PREX2                 0.019   DEP domain containing 2 isoform a 
FGD3                  0.018   FYVE, RhoGEF and PH domain containing 3 
FGD3                  0.018   FYVE, RhoGEF and PH domain containing 3 
FGD6                  0.018   FYVE, RhoGEF and PH domain containing 6 
FGD2                  0.017   FYVE, RhoGEF and PH domain containing 2 
FGD4                  0.017   FYVE, RhoGEF and PH domain containing 4 
TIAM2                 0.016   T-cell lymphoma invasion and metastasis 2 isoform a ...
ITSN1                 0.016   intersectin 1 isoform ITSN-l 
TIAM2                 0.016   T-cell lymphoma invasion and metastasis 2 isoform b ...
VAV3                  0.015   vav 3 guanine nucleotide exchange factor isoform 1 ...
VAV2                  0.014   vav 2 guanine nucleotide exchange factor isoform 1 ...
VAV2                  0.014   vav 2 guanine nucleotide exchange factor isoform 2 [...
ECT2L                 0.014   epithelial cell transforming sequence 2 oncogene-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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