Guide to the Human Genome
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Name: PPP1R13L Sequence: fasta or formatted (828aa) NCBI GI: 215820635
Description:

protein phosphatase 1, regulatory subunit 13 like

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt mRNA [828aa] protein phosphatase 1, regulatory subunit 13 like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         85           3
 C cysteine            0.7          6           1
 D aspartate           4.6         38           2
 E glutamate           5.8         48           2
 F phenylalanine       2.9         24           2
 G glycine             7.6         63           2
 H histidine           1.4         12           1
 I isoleucine          1.9         16           2
 K lysine              2.8         23           2
 L leucine             8.7         72           3
 M methionine          1.8         15           1
 N asparagine          1.9         16           1
 P proline            15.7        130           3
 Q glutamine           5.8         48           2
 R arginine            7.1         59           3
 S serine              9.5         79           4
 T threonine           4.3         36           2
 V valine              3.5         29           2
 W tryptophan          1.3         11           3
 Y tyrosine            2.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory subunit 13 like [... 
PPP1R13L              1.000   protein phosphatase 1, regulatory subunit 13 like [H...
PPP1R13B              0.161   apoptosis-stimulating protein of p53, 1 
TP53BP2               0.152   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.152   tumor protein p53 binding protein, 2 isoform 2 
NACA                  0.048   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.046   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.041   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.041   PREDICTED: hypothetical protein LOC80164 
MLL2                  0.040   myeloid/lymphoid or mixed-lineage leukemia 2 
PTPN23                0.036   protein tyrosine phosphatase, non-receptor type 23 [...
PPP1R16B              0.035   protein phosphatase 1 regulatory inhibitor subunit 1...
PPP1R16A              0.034   protein phosphatase 1, regulatory (inhibitor) subuni...
WNK2                  0.032   WNK lysine deficient protein kinase 2 
PRB2                  0.032   proline-rich protein BstNI subfamily 2 
C6orf132              0.032   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.032   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.032   PREDICTED: hypothetical protein LOC647024 
PRB3                  0.031   proline-rich protein BstNI subfamily 3 precursor [H...
PPP1R12B              0.030   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.030   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12C              0.030   protein phosphatase 1, regulatory subunit 12C 
ZNF469                0.029   zinc finger protein 469 
GLTSCR1               0.029   glioma tumor suppressor candidate region gene 1 [Ho...
BRD4                  0.029   bromodomain-containing protein 4 isoform long 
PPP1R12A              0.029   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.029   protein phosphatase 1, regulatory (inhibitor) subunit...
WIPF1                 0.029   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.029   WAS/WASL interacting protein family, member 1 
PCLO                  0.028   piccolo isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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