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Search of human proteins with 105553088
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|105553088 t-complex 10 [Homo sapiens]
(326 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|105553088 t-complex 10 [Homo sapiens] 654 0.0
gi|223468602 t-complex 10-like 2 [Homo sapiens] 629 0.0
gi|21389535 T-complex 10A-2 [Homo sapiens] 278 5e-75
gi|130980075 centromere protein J [Homo sapiens] 56 5e-08
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa... 44 3e-04
gi|171906567 peripheral benzodiazepine receptor-associated prote... 44 3e-04
gi|171906559 peripheral benzodiazepine receptor-associated prote... 44 3e-04
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa... 43 4e-04
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 42 6e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 6e-04
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 42 7e-04
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 42 0.001
gi|254028234 MAP/microtubule affinity-regulating kinase 2 isofor... 41 0.001
gi|254028237 MAP/microtubule affinity-regulating kinase 2 isofor... 40 0.004
gi|23308697 signal recognition particle receptor [Homo sapiens] 40 0.004
gi|153085395 histone deacetylase 4 [Homo sapiens] 39 0.005
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.005
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.005
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.005
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 39 0.006
gi|70980547 FYVE-finger-containing Rab5 effector protein rabenos... 39 0.006
gi|239751461 PREDICTED: hypothetical protein XP_002347871 [Homo ... 39 0.008
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 39 0.008
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 39 0.008
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 39 0.008
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 39 0.008
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 39 0.008
gi|29893555 angiopoietin-like 6 [Homo sapiens] 39 0.008
gi|86990441 MAP/microtubule affinity-regulating kinase 2 isoform... 38 0.014
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 38 0.014
>gi|105553088 t-complex 10 [Homo sapiens]
Length = 326
Score = 654 bits (1688), Expect = 0.0
Identities = 326/326 (100%), Positives = 326/326 (100%)
Query: 1 MEKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNR 60
MEKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNR
Sbjct: 1 MEKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNR 60
Query: 61 ELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKS 120
ELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKS
Sbjct: 61 ELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKS 120
Query: 121 QSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTP 180
QSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTP
Sbjct: 121 QSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTP 180
Query: 181 GAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSE 240
GAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSE
Sbjct: 181 GAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSE 240
Query: 241 GGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHPKGKAD 300
GGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHPKGKAD
Sbjct: 241 GGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHPKGKAD 300
Query: 301 DCRRSGFPSEFPGALHAAPSRQDMGP 326
DCRRSGFPSEFPGALHAAPSRQDMGP
Sbjct: 301 DCRRSGFPSEFPGALHAAPSRQDMGP 326
>gi|223468602 t-complex 10-like 2 [Homo sapiens]
Length = 353
Score = 629 bits (1623), Expect = 0.0
Identities = 316/326 (96%), Positives = 319/326 (97%)
Query: 1 MEKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNR 60
MEKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNR
Sbjct: 28 MEKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNR 87
Query: 61 ELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKS 120
ELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKIS LSADE+TTPKYAGRKS
Sbjct: 88 ELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISPLSADEETTPKYAGRKS 147
Query: 121 QSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTP 180
QSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTP
Sbjct: 148 QSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTP 207
Query: 181 GAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSE 240
GAERR VSEDGKIMHPSSRS QNSGGRKSPVQASQA TLQEQTAAA ADRSSSVLGSSE
Sbjct: 208 GAERREVSEDGKIMHPSSRSLQNSGGRKSPVQASQAATLQEQTAAAGVADRSSSVLGSSE 267
Query: 241 GGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHPKGKAD 300
GGFLSRVQA+EFASS+PDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHP GKAD
Sbjct: 268 GGFLSRVQAEEFASSSPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHPNGKAD 327
Query: 301 DCRRSGFPSEFPGALHAAPSRQDMGP 326
DCRRSGFPSEFPGALHAAPSRQDMGP
Sbjct: 328 DCRRSGFPSEFPGALHAAPSRQDMGP 353
>gi|21389535 T-complex 10A-2 [Homo sapiens]
Length = 215
Score = 278 bits (711), Expect = 5e-75
Identities = 141/186 (75%), Positives = 157/186 (84%)
Query: 1 MEKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNR 60
MEKT AAEV ED N GEMP LQQQI LHQELGRQ+SLWAD+H KL+SH+DALR+QN
Sbjct: 28 MEKTAVAAEVLTEDCNTGEMPPLQQQIIRLHQELGRQKSLWADVHGKLRSHIDALREQNM 87
Query: 61 ELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKS 120
ELRE+LR LQ Q+W+A KK AASPHAG+ESHTLALEPAFGKIS LSADE+T PKYAG K+
Sbjct: 88 ELREKLRALQLQRWKARKKSAASPHAGQESHTLALEPAFGKISPLSADEETIPKYAGHKN 147
Query: 121 QSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTP 180
QSATLLGQR SSN+ APPKPMSLK ERI+S KTPPQE+R+K+ RRQDR PTGRPTP
Sbjct: 148 QSATLLGQRSSSNNSAPPKPMSLKIERISSWKTPPQENRDKNLSRRRQDRRATPTGRPTP 207
Query: 181 GAERRG 186
AERRG
Sbjct: 208 CAERRG 213
>gi|130980075 centromere protein J [Homo sapiens]
Length = 1338
Score = 55.8 bits (133), Expect = 5e-08
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 2 EKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNRE 61
EK AA + E+ +L+QQI L ++L R+++ W+ H +L+S + L ++N +
Sbjct: 978 EKYTTAARTFPDKKEREEIQTLKQQIADLREDLKRKETKWSSTHSRLRSQIQMLVRENTD 1037
Query: 62 LREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKSQ 121
LREE++ ++R + +A K+ A+E + ++ +T+ ++ +
Sbjct: 1038 LREEIKVMERFRLDAWKRAE------------AIESSL-EVEKKDKLANTSVRFQNSQIS 1084
Query: 122 SATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSP-APTGRPTP 180
S T + +++ N+L PM R S PP++ R P P P P
Sbjct: 1085 SGTQV-EKYKKNYL----PMQGNPPR-RSKSAPPRDLGNLDKGQAASPREPLEPLNFPDP 1138
Query: 181 GAERRGVSED--GKIMHPSSR 199
+ +D G+I HP +
Sbjct: 1139 EYKEEEEDQDIQGEISHPDGK 1159
>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
sapiens]
Length = 1297
Score = 43.5 bits (101), Expect = 3e-04
Identities = 73/326 (22%), Positives = 135/326 (41%), Gaps = 45/326 (13%)
Query: 24 QQQITSLHQELGRQQSLWADIHRKL---QSHMDALRKQNRELREELRGLQRQQWEAGKKP 80
Q+Q+ L Q+L +Q+L + RK Q + L++Q ++ R+ L LQ Q+ E
Sbjct: 455 QRQLEILQQQLLHEQALLLEYKRKQLEEQRQAERLQRQLKQERDYLVSLQHQRQEQRPVE 514
Query: 81 AASPHAGRESHTLALEPAFGK-ISHLSADEDTTPKYAGRKS------------------Q 121
+ +E + + +PA+ K I HL A + P +S
Sbjct: 515 KKPLYHYKEGMSPSEKPAWAKEIPHLVAVKSQGPALTASQSVHEQPTKGLSGFQEALNVT 574
Query: 122 SATLLGQRWSSNHLAPPKPMSLKTERIN-SGKTPPQEDREKSPPGRRQDRSPAPTGRPTP 180
S + R +S+ + P+ + E+ + S +ED P R SPA + +P
Sbjct: 575 SHRVEMPRQNSDPTSENPPLPTRIEKFDRSSWLRQEEDIPPKVPQRTTSISPALARKNSP 634
Query: 181 G-----AERRGVSEDGKIMHPSSRSPQ---NSGGRKSPVQASQATTLQEQTAAARGADRS 232
G R G S+ + +P R + S +++ +S +++ +++G +
Sbjct: 635 GNGSALGPRLG-SQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQGGSQP 693
Query: 233 SSVLGSSEGGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQ--------AMDTKMK 284
S GSSE +RV+A+ + +P + V P S +I + A+ +++
Sbjct: 694 GSQAGSSE---RTRVRANSKSEGSP-VLPHEPAKVKPEESRDITRPSRPADLTALAKELR 749
Query: 285 KEEVQEEKRHPKGKADDCRRSGFPSE 310
+ ++E R P K D S SE
Sbjct: 750 ELRIEETNR-PMKKVTDYSSSSEESE 774
>gi|171906567 peripheral benzodiazepine receptor-associated protein
1 isoform b [Homo sapiens]
Length = 1797
Score = 43.5 bits (101), Expect = 3e-04
Identities = 71/322 (22%), Positives = 118/322 (36%), Gaps = 49/322 (15%)
Query: 14 DSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNRELREELRGLQRQQ 73
DS + LQ ++ SL Q L + + A ++L+ + R RE +EE+R LQ+ Q
Sbjct: 358 DSALRKSQGLQSKLESLEQVLKHMREV-AQRRQQLEVEHEQARLSLREKQEEVRRLQQAQ 416
Query: 74 WEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSN 133
EA ++ H A++ + + A + +++ +LL Q +
Sbjct: 417 AEAQRE-----------HEGAVQLLESTLDSMQARVRELEEQCRSQTEQFSLLAQELQAF 465
Query: 134 HLAPPKPMSLKTERINSGK-----------TPPQEDREKSP---------PGRRQDRSPA 173
L P P+ L T ++ G + PQ R P PGR +S
Sbjct: 466 RLHPG-PLDLLTSALDCGSLGDCPPPPCCCSIPQPCRGSGPKDLDLPPGSPGRCTPKSSE 524
Query: 174 PTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPV----QASQATTLQEQTAAARGA 229
P G RR + + + S ++ + P AS+ L+ + + A
Sbjct: 525 PAPATLTGVPRRTAKKAESLSNSSHSESIHNSPKSCPTPEVDTASEVEELEADSVSLLPA 584
Query: 230 DRSSSVLGSSEGGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQ 289
S G+ FL+R + F P+ LP+ + I MD
Sbjct: 585 APEGSRGGARIQVFLARYSYNPF--EGPNENPEAELPLTAGEYIYIYGNMD--------- 633
Query: 290 EEKRHPKGKADDCRRSGFPSEF 311
E +G+ D RR PS F
Sbjct: 634 -EDGFFEGELMDGRRGLVPSNF 654
>gi|171906559 peripheral benzodiazepine receptor-associated protein
1 isoform a [Homo sapiens]
Length = 1857
Score = 43.5 bits (101), Expect = 3e-04
Identities = 71/322 (22%), Positives = 118/322 (36%), Gaps = 49/322 (15%)
Query: 14 DSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNRELREELRGLQRQQ 73
DS + LQ ++ SL Q L + + A ++L+ + R RE +EE+R LQ+ Q
Sbjct: 418 DSALRKSQGLQSKLESLEQVLKHMREV-AQRRQQLEVEHEQARLSLREKQEEVRRLQQAQ 476
Query: 74 WEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSN 133
EA ++ H A++ + + A + +++ +LL Q +
Sbjct: 477 AEAQRE-----------HEGAVQLLESTLDSMQARVRELEEQCRSQTEQFSLLAQELQAF 525
Query: 134 HLAPPKPMSLKTERINSGK-----------TPPQEDREKSP---------PGRRQDRSPA 173
L P P+ L T ++ G + PQ R P PGR +S
Sbjct: 526 RLHPG-PLDLLTSALDCGSLGDCPPPPCCCSIPQPCRGSGPKDLDLPPGSPGRCTPKSSE 584
Query: 174 PTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPV----QASQATTLQEQTAAARGA 229
P G RR + + + S ++ + P AS+ L+ + + A
Sbjct: 585 PAPATLTGVPRRTAKKAESLSNSSHSESIHNSPKSCPTPEVDTASEVEELEADSVSLLPA 644
Query: 230 DRSSSVLGSSEGGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQ 289
S G+ FL+R + F P+ LP+ + I MD
Sbjct: 645 APEGSRGGARIQVFLARYSYNPF--EGPNENPEAELPLTAGEYIYIYGNMD--------- 693
Query: 290 EEKRHPKGKADDCRRSGFPSEF 311
E +G+ D RR PS F
Sbjct: 694 -EDGFFEGELMDGRRGLVPSNF 714
>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
sapiens]
Length = 1305
Score = 42.7 bits (99), Expect = 4e-04
Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 36/299 (12%)
Query: 24 QQQITSLHQELGRQQSLWADIHRKL---QSHMDALRKQNRELREELRGLQRQQWEAGKKP 80
Q+Q+ L Q+L +Q+L + RK Q + L++Q ++ R+ L LQ Q+ E
Sbjct: 455 QRQLEILQQQLLHEQALLLEYKRKQLEEQRQAERLQRQLKQERDYLVSLQHQRQEQRPVE 514
Query: 81 AASPHAGRESHTLALEPAFGK-ISHLSADEDTTPKYAGRKS------------------Q 121
+ +E + + +PA+ K I HL A + P +S
Sbjct: 515 KKPLYHYKEGMSPSEKPAWAKEIPHLVAVKSQGPALTASQSVHEQPTKGLSGFQEALNVT 574
Query: 122 SATLLGQRWSSNHLAPPKPMSLKTERIN-SGKTPPQEDREKSPPGRRQDRSPAPTGRPTP 180
S + R +S+ + P+ + E+ + S +ED P R SPA + +P
Sbjct: 575 SHRVEMPRQNSDPTSENPPLPTRIEKFDRSSWLRQEEDIPPKVPQRTTSISPALARKNSP 634
Query: 181 G-----AERRGVSEDGKIMHPSSRSPQ---NSGGRKSPVQASQATTLQEQTAAARGADRS 232
G R G S+ + +P R + S +++ +S +++ +++G +
Sbjct: 635 GNGSALGPRLG-SQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQGGSQP 693
Query: 233 SSVLGSSEGGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEE 291
S GSSE +RV+A+ + +P + V P S +I + K+ + E+
Sbjct: 694 GSQAGSSE---RTRVRANSKSEGSP-VLPHEPAKVKPEESRDITRPSRPASYKKAIDED 748
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 42.4 bits (98), Expect = 6e-04
Identities = 65/303 (21%), Positives = 111/303 (36%), Gaps = 45/303 (14%)
Query: 4 TPAAAE-----VPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQ 58
TP+ AE P +DS Q ++S+ Q +Q + H Q ++ +
Sbjct: 376 TPSTAEPSKFPFPTKDS---------QHVSSVTQNQ-KQYDTSSKTHSNSQQGTSSMLED 425
Query: 59 NRELREELRGLQRQQWEAGKKPAASPHAGRE-SHTLALEPAFGKISHLSADEDTTPKYAG 117
+ +L + Q E +A P A + +A + S ++D D++
Sbjct: 426 DLQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDSSSDSES 485
Query: 118 RKSQSATLLGQRWSSNHLAPPKPMSLKTE------RINSGKTPPQEDREKSPPGRRQDR- 170
S S + + + P P + K + +++ PP+ R PP R +
Sbjct: 486 ESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLTKVSQPAAPPEGPRSTEPPRRHPESK 545
Query: 171 --SPAPTGR-------PTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQE 221
S + T + P P + + + HP RS Q S ++ P Q T Q
Sbjct: 546 GSSDSATSQEHSESKDPPPKSSSKAPRAPPEAPHPGKRSCQKSPAQQEPPQRQTVGTKQP 605
Query: 222 Q---TAAARGADRSSSVLGSSEGGFLSRVQADEFASSAPD---------SAERQNLPVNP 269
+ A+AR R +S+ G E G L D+ + P +A + P P
Sbjct: 606 KKPVKASARAGSR-TSLQGEREPGLLPYGSRDQTSKDKPKVKTKGRPRAAASNEPKPAVP 664
Query: 270 PSS 272
PSS
Sbjct: 665 PSS 667
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 42.4 bits (98), Expect = 6e-04
Identities = 52/189 (27%), Positives = 73/189 (38%), Gaps = 19/189 (10%)
Query: 138 PKPMSLKTERINSGKTPPQEDREKSP-PGRRQDRSPAPTGRPTPGAERRGVSEDGKIMHP 196
P P S + + PP +D+ +SP P D+S + TP A + +S
Sbjct: 2425 PSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTT 2484
Query: 197 SSRSPQNS-------GGRKSPVQASQATTLQEQTAAA---------RGADRSSSVLGSSE 240
SS N G S V A+T +Q +A R + SSS SS
Sbjct: 2485 SSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSS 2544
Query: 241 GGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHPKGKAD 300
S + SS+ DS E +LPV P +L+ + T KE V+E + A
Sbjct: 2545 SSSSSSSSSSSSGSSSSDS-EGSSLPVQPEVALKRVPS-PTPAPKEAVREGRPPEPTPAK 2602
Query: 301 DCRRSGFPS 309
RRS S
Sbjct: 2603 RKRRSSSSS 2611
Score = 41.2 bits (95), Expect = 0.001
Identities = 60/271 (22%), Positives = 104/271 (38%), Gaps = 36/271 (13%)
Query: 12 REDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNRELREELRG--L 69
R+ S + + S ++Q + + R++ + H + + ++ R +R R R
Sbjct: 1788 RDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPT 1847
Query: 70 QRQQWEAGKKPA--------ASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKSQ 121
R++ + PA ASP R S + IS + T+P + R+S+
Sbjct: 1848 SRKRSRSRTSPAPWKRSRSRASPATHRRSRSRT-----PLISRRRSRSRTSP-VSRRRSR 1901
Query: 122 SATLLGQRWSSNHLAPPKPMSLKTERINSGKTPP---QEDREKSPPGRRQDRSPAPTGRP 178
S T + +R S + +P + R + +TPP + R ++P RR+ RS P
Sbjct: 1902 SRTSVTRRRSRSRASPV------SRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTP---- 1951
Query: 179 TPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGS 238
P RR S + SRS R SP+ ++ + R R+S V
Sbjct: 1952 -PVTRRRSRSRTPPVTRRRSRS------RTSPITRRRSRSRTSPVTRRRSRSRTSPVTRR 2004
Query: 239 SEGGFLSRVQADEFASSAPDSAERQNLPVNP 269
S V S P + R++ P
Sbjct: 2005 RSRSRTSPVTRRRSRSRTPPAIRRRSRSRTP 2035
Score = 39.7 bits (91), Expect = 0.004
Identities = 69/282 (24%), Positives = 108/282 (38%), Gaps = 37/282 (13%)
Query: 47 KLQSHMDALRKQNRELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLS 106
K + H K R+ +++ R R A K A H + + + S +
Sbjct: 225 KKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRA--HRSTSADSASSSDTSRSRSRSA 282
Query: 107 ADEDTTPKYAGRKSQSATLLGQRWSSNHLAP-PKPMSLKTERINSGKTP------PQEDR 159
A + T AGR A+ G+R + AP +P + T+R +S +T P ED+
Sbjct: 283 AAKTHTTALAGRSPSPAS--GRRGEGD--APFSEPGTTSTQRPSSPETATKQPSSPYEDK 338
Query: 160 EK----------SPPGRRQDRSPAPTGRPTP-GAERRGVSEDGKIMHPSSRSPQNSGGRK 208
+K SP R P P PTP AER G S P S+ P N
Sbjct: 339 DKDKKEKSATRPSPSPERSSTGPEPPA-PTPLLAERHGGSPQPLATTPLSQEPVNPPSEA 397
Query: 209 SPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQADEFASSAPDSAERQNLPVN 268
SP + E+ + ++ S S + +SR ASS+P+S +
Sbjct: 398 SPTRDRSPPKSPEKLPQSSSSESSPP---SPQPTKVSR-----HASSSPESPKPAPA--- 446
Query: 269 PPSSLEIAQAMDTKMKKE-EVQEEKRHPKGKADDCRRSGFPS 309
P S EI+ + +K + + +K H + RS P+
Sbjct: 447 PGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPA 488
Score = 38.9 bits (89), Expect = 0.006
Identities = 72/339 (21%), Positives = 110/339 (32%), Gaps = 71/339 (20%)
Query: 2 EKTPAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNRE 61
++ + +E + P Q+ + QEL + S + S D+ K
Sbjct: 1513 QRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTP 1572
Query: 62 LREELRGLQRQQWEAGKKPAASPHAGRESHTLALE--PAFGKISHLSADEDTTPKYAG-- 117
LR+ R E K SP R + ++ P + +D PK
Sbjct: 1573 LRQRSRSGSSP--EVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPR 1630
Query: 118 ---RKSQSATLLGQRW------SSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQ 168
R+S+S + R SS +P P +T R S +P + + ++PP RR
Sbjct: 1631 ALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRS 1690
Query: 169 DRSPAPTGRP-------------------TPGAERRGVSEDGKIMHPSSRSPQNSGGRKS 209
RS R TP RR S SRS + S
Sbjct: 1691 SRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASS 1750
Query: 210 P------------------VQASQATTLQEQTAAARGADRSSSVLGSSE----------- 240
P +Q S++ + +E+T R DRS S +S
Sbjct: 1751 PRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRV 1810
Query: 241 -------GGFLSRVQADEFASSAPDSAERQNLPVNPPSS 272
G+ SR A + SS S R+ PP+S
Sbjct: 1811 TRRRRGGSGYHSRSPARQ-ESSRTSSRRRRGRSRTPPTS 1848
Score = 38.1 bits (87), Expect = 0.011
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 13/162 (8%)
Query: 79 KPAASPHAGRESHTLALEPAFGKISHLSADED-----TTPKYAGRKSQSATLLGQRWSSN 133
KPA +P + RE ++ P SH A D T + GR AT +R S
Sbjct: 442 KPAPAPGSHRE---ISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPAT--AKRGRSR 496
Query: 134 HLAPPKP--MSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTG-RPTPGAERRGVSED 190
P K ++ + ++ + R +SP R + RSP G + +RRG S
Sbjct: 497 SRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRS 556
Query: 191 GKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRS 232
+ SRSP G +S A + + A R R+
Sbjct: 557 ARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRT 598
Score = 37.0 bits (84), Expect = 0.024
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 17/194 (8%)
Query: 70 QRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQR 129
QR+ EA K+PA P + ++L E + + + K GR+S+S++ +R
Sbjct: 154 QRRAREA-KQPAPEPP---KPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRER 209
Query: 130 WSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVSE 189
S+ + S +R + TP + + K +++ RS + T P R S
Sbjct: 210 KKSSKKKKHRSESESKKRKHRSPTPKSKRKSKD---KKRKRSRSTTPAPKSRRAHRSTSA 266
Query: 190 DGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQA 249
D +SRS S K+ A A R +S G + F
Sbjct: 267 DSASSSDTSRSRSRSAAAKTHTTA----------LAGRSPSPASGRRGEGDAPFSEPGTT 316
Query: 250 DEFASSAPDSAERQ 263
S+P++A +Q
Sbjct: 317 STQRPSSPETATKQ 330
Score = 34.7 bits (78), Expect = 0.12
Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 33/157 (21%)
Query: 77 GKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLA 136
G+ P +P + + + + S S+ ++ + S S++ SS A
Sbjct: 2593 GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA 2652
Query: 137 PPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSP---------------------APT 175
P P +L P +K PPG R+ RSP P+
Sbjct: 2653 KPGPQAL----------PKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPS 2702
Query: 176 GRPTPGAERRGVSEDG--KIMHPSSRSPQNSGGRKSP 210
+P+P ++ SE G + SRSP + R++P
Sbjct: 2703 PQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETP 2739
Score = 33.5 bits (75), Expect = 0.26
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 1/130 (0%)
Query: 101 KISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDRE 160
K S +S+ + K++S L + S + P + R SG + P+ +
Sbjct: 750 KKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKA-KS 808
Query: 161 KSPPGRRQDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQ 220
++PP R + S P + + R+ S S +P G SP Q+ T Q
Sbjct: 809 RTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQ 868
Query: 221 EQTAAARGAD 230
++ D
Sbjct: 869 RRSCFESSPD 878
Score = 33.1 bits (74), Expect = 0.34
Identities = 42/195 (21%), Positives = 71/195 (36%), Gaps = 36/195 (18%)
Query: 79 KPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPP 138
+P AS A + S AL+PA + S S+ ++ + S S++ SS+
Sbjct: 2508 EPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSS 2567
Query: 139 KPMS--LKTERINSGKTPPQED-REKSPPGRRQDRSPAPTGRPTPGAERRGVSEDGKIMH 195
P+ + +R+ S P+E RE PP PTP +R
Sbjct: 2568 LPVQPEVALKRVPSPTPAPKEAVREGRPP------------EPTPAKRKR---------- 2605
Query: 196 PSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQADEFASS 255
R S +S +++ ++++ + SSS SS S + A
Sbjct: 2606 -----------RSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP 2654
Query: 256 APDSAERQNLPVNPP 270
P + + P PP
Sbjct: 2655 GPQALPKPASPKKPP 2669
Score = 31.6 bits (70), Expect = 1.0
Identities = 64/281 (22%), Positives = 100/281 (35%), Gaps = 41/281 (14%)
Query: 9 EVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADI---HRKLQSHMDALRKQNRELREE 65
++P+ S+ PS Q S H + A HR++ S + + + + +
Sbjct: 411 KLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD 470
Query: 66 LRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATL 125
G+ + SP + + + P K H +P++ R+S+SA
Sbjct: 471 KSHSHTPSRRMGR--SRSPATAKRGRSRSRTPT--KRGH---SRSRSPQW--RRSRSA-- 519
Query: 126 LGQRWSSNHL--------APPKP---MSLKTER---INSGKTPPQEDREKSPPGRRQDRS 171
QRW + +P +P S T+R S + R + GR + R+
Sbjct: 520 --QRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRT 577
Query: 172 PAPTGRP---TPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQA-------SQATTLQE 221
PA GR TP A RR S SR+P G +S A S
Sbjct: 578 PARRGRSRSRTP-ARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSR 636
Query: 222 QTAAARGADRSSSVLGSSEGGFLSRVQADEFASSAPDSAER 262
+ AR + RS S + G SR A S + A R
Sbjct: 637 SRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARR 677
Score = 31.2 bits (69), Expect = 1.3
Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 16/110 (14%)
Query: 154 PPQEDREKSPPGRRQDRSPAPT-GRP-----------TPGAERRGVSEDGKIMHPSSRSP 201
PPQED SPP ++ SP P RP TP ER G + +S P
Sbjct: 1171 PPQEDATASPPRQKDKFSPFPVQDRPESSLVFKDTLRTPPRERSGAGSSPETKEQNSALP 1230
Query: 202 QNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQADE 251
+S + + E+ A + SS + S F S + +E
Sbjct: 1231 TSS----QDEELMEVVEKSEEPAGQILSHLSSELKEMSTSNFESSPEVEE 1276
Score = 30.4 bits (67), Expect = 2.2
Identities = 57/269 (21%), Positives = 96/269 (35%), Gaps = 34/269 (12%)
Query: 56 RKQNRELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKI-----SHLSADED 110
R+++R RG R + A ++ R S + + G+ +
Sbjct: 601 RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRS 660
Query: 111 TTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPP----GR 166
TP GR S+S T + S P + R S P+ R +S GR
Sbjct: 661 RTPARRGR-SRSRTPARRSGRSRSRTPAR-------RGRSRSRTPRRGRSRSRSLVRRGR 712
Query: 167 RQDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAA 226
R+P GR +ER+ S + S+ SP+ +KS + + ++ +L + A
Sbjct: 713 SHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEM---KKSRISSRRSRSLSSPRSKA 769
Query: 227 RG-ADRSSSVLGSS---EGGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTK 282
+ S+ GSS + + + SS P + R PP + + K
Sbjct: 770 KSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSR-----TPPRRSRSSSSPPPK 824
Query: 283 MKKEEVQEEKR-----HPKGKADDCRRSG 306
K + + HPK K+ R G
Sbjct: 825 QKSKTPSRQSHSSSSPHPKVKSGTPPRQG 853
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 42.0 bits (97), Expect = 7e-04
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 19 EMPSLQQQITSLHQELGRQQSLWADIHRKLQ-----SHMDALRKQNRELREELRGLQRQQ 73
E LQ Q+ L +L +++ A H KLQ +H DA ++QN+EL+E+LR L++ Q
Sbjct: 1585 EAQRLQAQLNELQAQLSQKEQ--AAEHYKLQMEKAKTHYDAKKQQNQELQEQLRSLEQLQ 1642
Query: 74 WEAGKKPAASPHAGRESHTLAL--EPAFGKISHLSADEDTTPKYAGRKSQSATLLGQ 128
E + A + G E L + A HL+A + Q LG+
Sbjct: 1643 KENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGK 1699
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 41.6 bits (96), Expect = 0.001
Identities = 77/316 (24%), Positives = 110/316 (34%), Gaps = 68/316 (21%)
Query: 25 QQITSLHQELGRQQSLWADIHRK---LQSHMDALRKQNRELREELRGLQRQQWEAGKKP- 80
+ + L+ + QQ L R+ L+ +D L ++NR+LREE Q + E + P
Sbjct: 21 EYLLELNNIIESQQQLLETQRRRIEELEGQLDQLTQENRDLREES---QLHRGELHRDPH 77
Query: 81 AASPHAGRESHTLAL---------------------------EPAFGKISHLSADEDTTP 113
A GRES L E A+ + D++
Sbjct: 78 GARDSPGRESQYQNLRETQFHHRELRESQFHQAARDVGYPNREGAYQNREAVYRDKERDA 137
Query: 114 KYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPA 173
Y + + T + + HL P +L ER P REK S A
Sbjct: 138 SYPLQDTTGYTARERDVAQCHLHHENP-ALGRERGGREAGPAHPGREKEA-----GYSAA 191
Query: 174 PTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSS 233
P P ER +S S SP GG + S ATTLQ ++ R+
Sbjct: 192 VGVGPRPPRERGQLSRGAS----RSSSPGAGGGHSTSTSTSPATTLQRKSDGEN--SRTV 245
Query: 234 SVLGSSEGGFLSRVQADEFASSAPDSAERQNLPVNPPSSLEIA----------------Q 277
SV G + G LS A +P S L PPSS + Q
Sbjct: 246 SVEGDAPGSDLST------AVDSPGSQPPYRLSQLPPSSSHMGGPPAGVGLPWAQRARLQ 299
Query: 278 AMDTKMKKEEVQEEKR 293
++K+E +E KR
Sbjct: 300 PASVALRKQEEEEIKR 315
>gi|254028234 MAP/microtubule affinity-regulating kinase 2 isoform d
[Homo sapiens]
Length = 788
Score = 41.2 bits (95), Expect = 0.001
Identities = 52/215 (24%), Positives = 82/215 (38%), Gaps = 30/215 (13%)
Query: 89 ESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMS----LK 144
E T+ L+P + L+ +P + ++S SA +R+S P P S K
Sbjct: 369 EGDTITLKPR--PSADLTNSSAPSPSHKVQRSVSANPKQRRFSDQAAGPAIPTSNSYSKK 426
Query: 145 TERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVS---EDGKIMHPSSRSP 201
T+ N+ P+EDRE GR+ + P PG ER+ + ++ S+
Sbjct: 427 TQSNNAENKRPEEDRES---GRKASSTAKVPASPLPGLERKKTTPTPSTNSVLSTSTNRS 483
Query: 202 QNS---------------GGRKSPVQASQATTLQEQTA--AARGADRSSSVLGSSEGGFL 244
+NS G + S+A+T A AAR S+ S
Sbjct: 484 RNSPLLERASLGQASIQNGKDSLTMPGSRASTASASAAVSAARPRQHQKSMSASVHPNKA 543
Query: 245 SRVQADEFASSAP-DSAERQNLPVNPPSSLEIAQA 278
S + E P S Q +PV PS+ I+ +
Sbjct: 544 SGLPPTESNCEVPRPSTAPQRVPVASPSAHNISSS 578
>gi|254028237 MAP/microtubule affinity-regulating kinase 2 isoform e
[Homo sapiens]
Length = 719
Score = 39.7 bits (91), Expect = 0.004
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 24/202 (11%)
Query: 89 ESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMS----LK 144
E T+ L+P + L+ +P + ++S SA +R+S P P S K
Sbjct: 369 EGDTITLKPR--PSADLTNSSAPSPSHKVQRSVSANPKQRRFSDQAAGPAIPTSNSYSKK 426
Query: 145 TERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVS---EDGKIMHPSSRSP 201
T+ N+ P+EDRE GR+ + P PG ER+ + ++ S+
Sbjct: 427 TQSNNAENKRPEEDRES---GRKASSTAKVPASPLPGLERKKTTPTPSTNSVLSTSTNRS 483
Query: 202 QNSG-------GRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSR---VQADE 251
+NS G+ S +T Q A+ A SS G+ + R ++
Sbjct: 484 RNSPLLERASLGQASIQNGKDSTAPQRVPVASPSAHNISSSGGAPDRTNFPRGVSSRSTF 543
Query: 252 FASSAPDSAERQNLP--VNPPS 271
A ++QNLP V P S
Sbjct: 544 HAGQLRQVRDQQNLPYGVTPAS 565
>gi|23308697 signal recognition particle receptor [Homo sapiens]
Length = 638
Score = 39.7 bits (91), Expect = 0.004
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 185 RGVSEDGKIMHPSSRSP-QNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGF 243
R E KI P++ ++S K PV++ T ++ A+ + + + S+G
Sbjct: 122 REAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNSKKKGAKKEGSDG-- 179
Query: 244 LSRVQADEFASSAPDSAERQNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHPKGKADDCR 303
A+S P AE+ LPV P + +E+++ + K+EE ++ K++
Sbjct: 180 -------PLATSKPVPAEKSGLPVGPENGVELSKEELIRRKREEFIQKHGRGMEKSNKST 232
Query: 304 RSGFPSE 310
+S P E
Sbjct: 233 KSDAPKE 239
>gi|153085395 histone deacetylase 4 [Homo sapiens]
Length = 1084
Score = 39.3 bits (90), Expect = 0.005
Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 38/217 (17%)
Query: 24 QQQITSLHQELGRQQSLWADIH--------RKLQSHMDA--LRKQNRE-----LREELRG 68
+Q LH+ + +QQ + A H RKL+ H L KQ+RE L+ + +G
Sbjct: 102 RQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKG 161
Query: 69 -----------LQRQQWEAGKKPAASPHAGRESHTLALEPAF--GKISHLSADEDTTPKY 115
++ Q++ KK A + +H ++ +P + GK H S D+ + P+
Sbjct: 162 KESAVASTEVKMKLQEFVLNKKKALAHR--NLNHCISSDPRYWYGKTQHSSLDQSSPPQS 219
Query: 116 AGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPT 175
S + +LG + + K S ++ S +R SP RR+D P T
Sbjct: 220 GVSTSYNHPVLGMYDAKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKD-GPVVT 278
Query: 176 G---RPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKS 209
RP + S G SP NS G S
Sbjct: 279 ALKKRPLDVTDSACSSAPGS----GPSSPNNSSGSVS 311
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.3 bits (90), Expect = 0.005
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 138 PKPMSLKTERINS------GKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVSEDG 191
P P+ K RI++ GK R G R+D S G P+P RR +
Sbjct: 126 PGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGT 185
Query: 192 KI----MHPSSR-SPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSR 246
++ PS+R P G RKS AS+ +T + AA R S GG L R
Sbjct: 186 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR---------RPSAGGGLQR 236
Query: 247 VQADEFASSA 256
+ +SSA
Sbjct: 237 PASRSLSSSA 246
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 39.3 bits (90), Expect = 0.005
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 138 PKPMSLKTERINS------GKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVSEDG 191
P P+ K RI++ GK R G R+D S G P+P RR +
Sbjct: 126 PGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGT 185
Query: 192 KI----MHPSSR-SPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSR 246
++ PS+R P G RKS AS+ +T + AA R S GG L R
Sbjct: 186 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR---------RPSAGGGLQR 236
Query: 247 VQADEFASSA 256
+ +SSA
Sbjct: 237 PASRSLSSSA 246
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.3 bits (90), Expect = 0.005
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 138 PKPMSLKTERINS------GKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVSEDG 191
P P+ K RI++ GK R G R+D S G P+P RR +
Sbjct: 117 PGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGT 176
Query: 192 KI----MHPSSR-SPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSR 246
++ PS+R P G RKS AS+ +T + AA R S GG L R
Sbjct: 177 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR---------RPSAGGGLQR 227
Query: 247 VQADEFASSA 256
+ +SSA
Sbjct: 228 PASRSLSSSA 237
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 38.9 bits (89), Expect = 0.006
Identities = 63/302 (20%), Positives = 106/302 (35%), Gaps = 30/302 (9%)
Query: 32 QELGRQQSLWADIHRKLQSHMDALRKQNRELREELRGLQRQQWEAGKKPAASPHAGRESH 91
++ ++ S + H+ + H + RK + E + + L+R+Q ++ K + GR
Sbjct: 182 KDANKESSKTSKPHKVTKEHRERPRKDS-ESKSSSKELEREQAKSSKDTSRKLGEGR--- 237
Query: 92 TLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSG 151
L +E P A K L + S P S
Sbjct: 238 -------------LPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPPPPPPPPPRASS 284
Query: 152 KTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRK--- 208
K P D K P ++Q +S + R PG R S ++ ++ G K
Sbjct: 285 KRPATADSPK-PSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEKVKA 343
Query: 209 --SPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQADEFASSAPDSAERQNLP 266
P +A +A ++E + + +S S S S + +SS D QN
Sbjct: 344 ESEPREAKKALEVEESNSEDEASFKSESAQSSP-----SNSSSSSDSSSDSDFEPSQNHS 398
Query: 267 VNP-PSSLEIAQAMDTKMKKEEVQEEKRHPKGKADDCRRSGFPSEFPGALHAA-PSRQDM 324
P S +E Q+ ++ EE D R S SE + ++ PSR+
Sbjct: 399 QGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSFSDSESDNSADSSLPSREPP 458
Query: 325 GP 326
P
Sbjct: 459 PP 460
>gi|70980547 FYVE-finger-containing Rab5 effector protein
rabenosyn-5 [Homo sapiens]
Length = 784
Score = 38.9 bits (89), Expect = 0.006
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 27/192 (14%)
Query: 19 EMPSLQQQITSLHQELGRQQSLWA-DIHRKLQSHMDALRKQNRELREELRGLQRQQWEAG 77
E+ +LQ+ + L E +QQ+ A ++ R+ D R+Q + LRE +R+Q+
Sbjct: 481 EVRTLQENLRQLQDEYDQQQTEKAIELSRRQAEEEDLQREQLQMLRERELEREREQFRVA 540
Query: 78 KKPAASPHAG-RESHTLALEPAFGKISHLS---------ADEDTTPKYAGRKSQSATLLG 127
+ RE LEP+ +HL+ T PK S S+T
Sbjct: 541 SLHTRTRSLDFREIGPFQLEPSREPRTHLAYALDLGSSPVPSSTAPK---TPSLSSTQPT 597
Query: 128 QRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGV 187
+ WS P ++ ER+ P Q + P +D S +P T G GV
Sbjct: 598 RVWSG-------PPAVGQERLPQSSMPQQHEGPSLNPFDEEDLS-SPMEEATTGPPAAGV 649
Query: 188 SEDGKIMHPSSR 199
S D PS+R
Sbjct: 650 SLD-----PSAR 656
>gi|239751461 PREDICTED: hypothetical protein XP_002347871 [Homo
sapiens]
Length = 559
Score = 38.5 bits (88), Expect = 0.008
Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
Query: 46 RKLQSHMDALRKQNRELREELRGLQRQQWEAGKKPAASPHAGRESHTLALEPAFGKI-SH 104
R + H AL ++ R REEL G Q + +K AASP + + A G++ SH
Sbjct: 103 RAKEKHRAALSEE-RSCREEL-GQQHPRHSRPRKTAASPEKPQTTK------ATGRMNSH 154
Query: 105 LSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINS-----GKTPPQEDR 159
L+ E K GR S G R + + P + ER N G+ E++
Sbjct: 155 LAPPE----KRKGRPEPSTKSGGGRCA---IHPRRSKGADLERSNPLVAAVGEIGLVEEK 207
Query: 160 EKSP--PGRRQDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQAT 217
EK GRRQ A P + +G S +GK+ P +S R+ V +
Sbjct: 208 EKGTARAGRRQLGKGAVCFVPALTSRSQGQSLEGKLRDLGQLWPADSSCRREAVSPASQC 267
Query: 218 TLQEQ 222
TL+E+
Sbjct: 268 TLREK 272
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 38.5 bits (88), Expect = 0.008
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Query: 183 ERRGVSEDGKIMHPSSRSPQNSGGRKSPVQ--ASQATTLQEQTAAARGADRSSSVLGSSE 240
E RG + H SRSP +S R Q ASQA+ + + RSSS S
Sbjct: 227 EVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSSDSISS 286
Query: 241 GGFLSRVQADEFASSAPDSAER--QNLPVNPPSSLEIAQAMDTKMKKEEVQEEKRHPKGK 298
S +D +SS+ DS R Q+ V P+S ++ + +K + + P
Sbjct: 287 SSSTSSDSSDSSSSSSDDSPARSVQSAAVPAPTSQLLSSLEKDEPRKSFGIKVQNLPVRS 346
Query: 299 ADDCRRSGFPSEF 311
D + G EF
Sbjct: 347 TDTSLKDGLFHEF 359
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 38.5 bits (88), Expect = 0.008
Identities = 54/250 (21%), Positives = 94/250 (37%), Gaps = 35/250 (14%)
Query: 94 ALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKT 153
+++PA K S +S E K A + + Q PP + K E +
Sbjct: 217 SVKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQ--VKGGALPPAKRAKKPEEESESSE 274
Query: 154 PPQEDREKSPPGRR----------QDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQN 203
E E++P G R Q R+ + + TPG + + GK +S++
Sbjct: 275 EGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPG-KGATPAPPGKAGAVASQTKAG 333
Query: 204 SGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQADEFASSAPDSAERQ 263
S + +++ +E+T AA+ ++L + G S+V A AS+ + R+
Sbjct: 334 KPEEDSESSSEESSDSEEETPAAK------ALLQAKASGKTSQVGA---ASAPAKESPRK 384
Query: 264 NLPVNPPSSL-------------EIAQAMDTKMKKEEVQEEKRHPKGKADDCRRSGFPSE 310
PP E +Q+ + EE + P GKA R + P++
Sbjct: 385 GAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAK 444
Query: 311 FPGALHAAPS 320
AAP+
Sbjct: 445 ESPRKGAAPA 454
Score = 32.7 bits (73), Expect = 0.45
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 38/164 (23%)
Query: 97 PAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQ 156
P+ GK +A T P+ S+ + + LA KP S KT +I + P +
Sbjct: 848 PSVGKAVATAAQAQTGPEEDSGSSEEES--DSEEEAETLAQVKP-SGKTHQIRAALAPAK 904
Query: 157 EDREKSPPGRRQDRSPAPTGRPTPGAERRGVSED--------------------GKIMHP 196
E SP R+ +P P G+ P A + G +D +++ P
Sbjct: 905 E----SP---RKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKP 957
Query: 197 ------SSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSS 234
+RSP +G +P QA A+T ++ A+ A SSS
Sbjct: 958 PLIFVDPNRSP--AGPAATPAQAQAASTPRKARASESTARSSSS 999
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 38.5 bits (88), Expect = 0.008
Identities = 54/250 (21%), Positives = 94/250 (37%), Gaps = 35/250 (14%)
Query: 94 ALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKT 153
+++PA K S +S E K A + + Q PP + K E +
Sbjct: 217 SVKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQ--VKGGALPPAKRAKKPEEESESSE 274
Query: 154 PPQEDREKSPPGRR----------QDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQN 203
E E++P G R Q R+ + + TPG + + GK +S++
Sbjct: 275 EGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPG-KGATPAPPGKAGAVASQTKAG 333
Query: 204 SGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQADEFASSAPDSAERQ 263
S + +++ +E+T AA+ ++L + G S+V A AS+ + R+
Sbjct: 334 KPEEDSESSSEESSDSEEETPAAK------ALLQAKASGKTSQVGA---ASAPAKESPRK 384
Query: 264 NLPVNPPSSL-------------EIAQAMDTKMKKEEVQEEKRHPKGKADDCRRSGFPSE 310
PP E +Q+ + EE + P GKA R + P++
Sbjct: 385 GAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAK 444
Query: 311 FPGALHAAPS 320
AAP+
Sbjct: 445 ESPRKGAAPA 454
Score = 32.7 bits (73), Expect = 0.45
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 38/164 (23%)
Query: 97 PAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQ 156
P+ GK +A T P+ S+ + + LA KP S KT +I + P +
Sbjct: 848 PSVGKAVATAAQAQTGPEEDSGSSEEES--DSEEEAETLAQVKP-SGKTHQIRAALAPAK 904
Query: 157 EDREKSPPGRRQDRSPAPTGRPTPGAERRGVSED--------------------GKIMHP 196
E SP R+ +P P G+ P A + G +D +++ P
Sbjct: 905 E----SP---RKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKP 957
Query: 197 ------SSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSS 234
+RSP +G +P QA A+T ++ A+ A SSS
Sbjct: 958 PLIFVDPNRSP--AGPAATPAQAQAASTPRKARASESTARSSSS 999
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 38.5 bits (88), Expect = 0.008
Identities = 54/250 (21%), Positives = 94/250 (37%), Gaps = 35/250 (14%)
Query: 94 ALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKT 153
+++PA K S +S E K A + + Q PP + K E +
Sbjct: 217 SVKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQ--VKGGALPPAKRAKKPEEESESSE 274
Query: 154 PPQEDREKSPPGRR----------QDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQN 203
E E++P G R Q R+ + + TPG + + GK +S++
Sbjct: 275 EGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPG-KGATPAPPGKAGAVASQTKAG 333
Query: 204 SGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQADEFASSAPDSAERQ 263
S + +++ +E+T AA+ ++L + G S+V A AS+ + R+
Sbjct: 334 KPEEDSESSSEESSDSEEETPAAK------ALLQAKASGKTSQVGA---ASAPAKESPRK 384
Query: 264 NLPVNPPSSL-------------EIAQAMDTKMKKEEVQEEKRHPKGKADDCRRSGFPSE 310
PP E +Q+ + EE + P GKA R + P++
Sbjct: 385 GAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAK 444
Query: 311 FPGALHAAPS 320
AAP+
Sbjct: 445 ESPRKGAAPA 454
Score = 32.7 bits (73), Expect = 0.45
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 38/164 (23%)
Query: 97 PAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQ 156
P+ GK +A T P+ S+ + + LA KP S KT +I + P +
Sbjct: 848 PSVGKAVATAAQAQTGPEEDSGSSEEES--DSEEEAETLAQVKP-SGKTHQIRAALAPAK 904
Query: 157 EDREKSPPGRRQDRSPAPTGRPTPGAERRGVSED--------------------GKIMHP 196
E SP R+ +P P G+ P A + G +D +++ P
Sbjct: 905 E----SP---RKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKP 957
Query: 197 ------SSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSS 234
+RSP +G +P QA A+T ++ A+ A SSS
Sbjct: 958 PLIFVDPNRSP--AGPAATPAQAQAASTPRKARASESTARSSSS 999
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 38.5 bits (88), Expect = 0.008
Identities = 54/250 (21%), Positives = 94/250 (37%), Gaps = 35/250 (14%)
Query: 94 ALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKT 153
+++PA K S +S E K A + + Q PP + K E +
Sbjct: 217 SVKPAQVKASSVSTKESPARKAAPAPGKVGDVTPQ--VKGGALPPAKRAKKPEEESESSE 274
Query: 154 PPQEDREKSPPGRR----------QDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQN 203
E E++P G R Q R+ + + TPG + + GK +S++
Sbjct: 275 EGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPG-KGATPAPPGKAGAVASQTKAG 333
Query: 204 SGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFLSRVQADEFASSAPDSAERQ 263
S + +++ +E+T AA+ ++L + G S+V A AS+ + R+
Sbjct: 334 KPEEDSESSSEESSDSEEETPAAK------ALLQAKASGKTSQVGA---ASAPAKESPRK 384
Query: 264 NLPVNPPSSL-------------EIAQAMDTKMKKEEVQEEKRHPKGKADDCRRSGFPSE 310
PP E +Q+ + EE + P GKA R + P++
Sbjct: 385 GAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAK 444
Query: 311 FPGALHAAPS 320
AAP+
Sbjct: 445 ESPRKGAAPA 454
Score = 31.6 bits (70), Expect = 1.0
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 13/119 (10%)
Query: 97 PAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQ 156
P+ GK +A T P+ S+ + + LA KP S KT +I + P +
Sbjct: 848 PSVGKAVATAAQAQTGPEEDSGSSEEES--DSEEEAETLAQVKP-SGKTHQIRAALAPAK 904
Query: 157 EDREKSPPGRRQDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQ 215
E SP R+ +P P G+ P A + G +D SS + G + V ++Q
Sbjct: 905 E----SP---RKGAAPTPPGKTGPSAAQAGKQDDS---GSSSEESDSDGEAPAAVTSAQ 953
>gi|29893555 angiopoietin-like 6 [Homo sapiens]
Length = 470
Score = 38.5 bits (88), Expect = 0.008
Identities = 54/220 (24%), Positives = 88/220 (40%), Gaps = 41/220 (18%)
Query: 5 PAAAEVPREDSNAGEMPSLQQQITSLHQELGRQQSLWADIHRKLQSHMDALRKQNRELRE 64
PA+ E +NA E+ +L+ ++ H+EL R+ A + + ALRK++R L
Sbjct: 47 PASTRATPEAANASELAALRMRV-GRHEELLRELQRLAAADGAVAGEVRALRKESRGLSA 105
Query: 65 ELRGLQRQ-QWEAGKKPAASPHAGRESHTLALEPAFG-KISHLSADEDTTP--------- 113
L L+ Q Q EAG P A P A + A G ++ + SA+
Sbjct: 106 RLGQLRAQLQHEAG--PGAGPGADLGAEPAAALALLGERVLNASAEAQRAAARFHQLDVK 163
Query: 114 --KYAGRKSQSATLL--------GQRWSSNHLAPPKPM-----------SLKTERINSGK 152
+ A +Q ++L+ G + PP P+ + T R+
Sbjct: 164 FRELAQLVTQQSSLIARLERLCPGGAGGQQQVLPPPPLVPVVPVRLVGSTSDTSRMLDPA 223
Query: 153 TPPQEDREKSPPGRRQD--RSPAPTGRPTPGAERRGVSED 190
PQ D+ + R+Q+ SP P G P + G +D
Sbjct: 224 PEPQRDQTQ----RQQEPMASPMPAGHPAVPTKPVGPWQD 259
>gi|86990441 MAP/microtubule affinity-regulating kinase 2 isoform a
[Homo sapiens]
Length = 745
Score = 37.7 bits (86), Expect = 0.014
Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 31/215 (14%)
Query: 89 ESHTLALEPAFGKISHLSADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMS----LK 144
E T+ L+P + L+ +P + ++S SA +R+S + P P S K
Sbjct: 336 EGDTITLKPR--PSADLTNSSAPSPSHKVQRSVSANPKQRRFS-DQAGPAIPTSNSYSKK 392
Query: 145 TERINSGKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAERRGVS---EDGKIMHPSSRSP 201
T+ N+ P+EDRE GR+ + P PG ER+ + ++ S+
Sbjct: 393 TQSNNAENKRPEEDRES---GRKASSTAKVPASPLPGLERKKTTPTPSTNSVLSTSTNRS 449
Query: 202 QNS---------------GGRKSPVQASQATTLQEQTA--AARGADRSSSVLGSSEGGFL 244
+NS G + S+A+T A AAR S+ S
Sbjct: 450 RNSPLLERASLGQASIQNGKDSLTMPGSRASTASASAAVSAARPRQHQKSMSASVHPNKA 509
Query: 245 SRVQADEFASSAP-DSAERQNLPVNPPSSLEIAQA 278
S + E P S Q +PV PS+ I+ +
Sbjct: 510 SGLPPTESNCEVPRPSTAPQRVPVASPSAHNISSS 544
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 37.7 bits (86), Expect = 0.014
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Query: 106 SADEDTTPKYAGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQEDREKSPPG 165
S +ED+ K + R+S+S + SS+ + P S R S + + R +S
Sbjct: 188 SEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSS-SRSRSRSRSRSSSSSQSRSRSS-S 245
Query: 166 RRQDRSPAPTGRPTPGAERRGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAA 225
R + RS R + + R S + SS SP+ + R +S + +T +
Sbjct: 246 RERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRS 305
Query: 226 ARGADRSSSVLGSSEGG 242
R S GSS G
Sbjct: 306 RSPERRHRSSSGSSHSG 322
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.123 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,284,833
Number of Sequences: 37866
Number of extensions: 846933
Number of successful extensions: 5874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 543
Number of HSP's that attempted gapping in prelim test: 5033
Number of HSP's gapped (non-prelim): 1343
length of query: 326
length of database: 18,247,518
effective HSP length: 103
effective length of query: 223
effective length of database: 14,347,320
effective search space: 3199452360
effective search space used: 3199452360
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.