Guide to the Human Genome
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Name: TCP10L2 Sequence: fasta or formatted (353aa) NCBI GI: 223468602
Description:

t-complex 10-like 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         38           3
 C cysteine            0.6          2           1
 D aspartate           4.0         14           2
 E glutamate           9.9         35           2
 F phenylalanine       1.4          5           1
 G glycine             7.6         27           2
 H histidine           2.8         10           1
 I isoleucine          1.7          6           1
 K lysine              5.7         20           2
 L leucine             7.1         25           2
 M methionine          2.5          9           1
 N asparagine          2.3          8           1
 P proline             9.6         34           2
 Q glutamine           7.4         26           3
 R arginine            8.2         29           2
 S serine             11.0         39           3
 T threonine           4.0         14           2
 V valine              2.3          8           1
 W tryptophan          0.8          3           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   t-complex 10-like 2 
TCP10                 0.883   t-complex 10 
TCP10L                0.450   T-complex 10A-2 
CENPJ                 0.048   centromere protein J 
BZRAP1                0.032   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.032   peripheral benzodiazepine receptor-associated prote...
SCARF2                0.025   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.025   scavenger receptor class F, member 2 isoform 2 [Homo...
TNIK                  0.025   TRAF2 and NCK interacting kinase isoform 6 
NUMA1                 0.025   nuclear mitotic apparatus protein 1 
SRRM2                 0.025   splicing coactivator subunit SRm300 
TNIK                  0.023   TRAF2 and NCK interacting kinase isoform 5 
AFF1                  0.023   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
SMTNL1                0.022   smoothelin-like 1 
MARK2                 0.022   MAP/microtubule affinity-regulating kinase 2 isofor...
MLLT1                 0.022   myeloid/lymphoid or mixed-lineage leukemia (trithora...
FBXO42                0.022   F-box protein 42 
MARK2                 0.022   MAP/microtubule affinity-regulating kinase 2 isofor...
PPP1R12A              0.022   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.022   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.022   protein phosphatase 1, regulatory (inhibitor) subunit...
ANGPTL6               0.022   angiopoietin-like 6 
SRPR                  0.020   signal recognition particle receptor 
RECQL4                0.020   RecQ protein-like 4 
PCDH15                0.020   protocadherin 15 isoform CD2-1 precursor 
ARID1B                0.020   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.020   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.020   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
MYH14                 0.019   myosin, heavy chain 14 isoform 1 
MYH14                 0.019   myosin, heavy chain 14 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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