Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MARK2 Sequence: fasta or formatted (745aa) NCBI GI: 86990441
Description:

MAP/microtubule affinity-regulating kinase 2 isoform a

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [724aa] MAP/microtubule affinity-regulating kinase 2 isoform c
alt prot [788aa] MAP/microtubule affinity-regulating kinase 2 isoform d
alt prot [719aa] MAP/microtubule affinity-regulating kinase 2 isoform e
alt prot [709aa] MAP/microtubule affinity-regulating kinase 2 isoform f
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         48           2
 C cysteine            0.9          7           1
 D aspartate           3.9         29           2
 E glutamate           6.8         51           2
 F phenylalanine       3.5         26           1
 G glycine             6.2         46           2
 H histidine           2.3         17           1
 I isoleucine          3.6         27           2
 K lysine              7.5         56           2
 L leucine             8.3         62           3
 M methionine          2.8         21           2
 N asparagine          5.1         38           2
 P proline             6.4         48           2
 Q glutamine           3.6         27           2
 R arginine            7.4         55           2
 S serine             10.9         81           3
 T threonine           5.4         40           2
 V valine              5.8         43           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAP/microtubule affinity-regulating kinase 2 isoform... 
MARK2                 0.992   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.896   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.871   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.869   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK1                 0.658   MAP/microtubule affinity-regulating kinase 1 
MARK3                 0.582   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.581   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.575   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK3                 0.573   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK4                 0.415   MAP/microtubule affinity-regulating kinase 4 
MARK3                 0.301   MAP/microtubule affinity-regulating kinase 3 isofor...
QSK                   0.245   serine/threonine-protein kinase QSK 
SIK1                  0.230   SNF1-like kinase 
SIK2                  0.228   SNF1-like kinase 2 
BRSK1                 0.184   BR serine/threonine kinase 1 
BRSK2                 0.180   BR serine/threonine kinase 2 
SNRK                  0.175   SNF related kinase 
SNRK                  0.175   SNF related kinase 
PRKAA1                0.166   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKAA2                0.165   AMP-activated protein kinase alpha 2 catalytic subun...
PRKAA1                0.159   protein kinase, AMP-activated, alpha 1 catalytic sub...
NUAK1                 0.158   AMPK-related protein kinase 5 
MGC42105              0.158   serine/threonine-protein kinase NIM1 
NUAK2                 0.156   NUAK family, SNF1-like kinase, 2 
MELK                  0.154   maternal embryonic leucine zipper kinase 
HUNK                  0.137   hormonally upregulated Neu-associated kinase 
TSSK1B                0.114   testis-specific serine kinase 1 
TSSK3                 0.110   testis-specific serine kinase 3 
TSSK2                 0.108   testis-specific serine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press