Guide to the Human Genome
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Name: MARK2 Sequence: fasta or formatted (788aa) NCBI GI: 254028234
Description:

MAP/microtubule affinity-regulating kinase 2 isoform d

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [724aa] MAP/microtubule affinity-regulating kinase 2 isoform c
alt prot [719aa] MAP/microtubule affinity-regulating kinase 2 isoform e
alt prot [709aa] MAP/microtubule affinity-regulating kinase 2 isoform f
alt prot [745aa] MAP/microtubule affinity-regulating kinase 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         51           2
 C cysteine            0.9          7           1
 D aspartate           3.9         31           2
 E glutamate           6.7         53           2
 F phenylalanine       3.6         28           1
 G glycine             6.0         47           2
 H histidine           2.3         18           1
 I isoleucine          3.4         27           2
 K lysine              7.4         58           2
 L leucine             8.5         67           3
 M methionine          2.8         22           2
 N asparagine          5.2         41           2
 P proline             6.6         52           2
 Q glutamine           3.6         28           2
 R arginine            7.6         60           2
 S serine             11.2         88           3
 T threonine           5.6         44           2
 V valine              5.5         43           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.4         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAP/microtubule affinity-regulating kinase 2 isofor... 
MARK2                 0.937   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK2                 0.881   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.876   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.859   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK1                 0.633   MAP/microtubule affinity-regulating kinase 1 
MARK3                 0.570   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.557   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.553   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK3                 0.552   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK4                 0.393   MAP/microtubule affinity-regulating kinase 4 
MARK3                 0.285   MAP/microtubule affinity-regulating kinase 3 isofor...
QSK                   0.231   serine/threonine-protein kinase QSK 
SIK1                  0.217   SNF1-like kinase 
SIK2                  0.215   SNF1-like kinase 2 
BRSK1                 0.174   BR serine/threonine kinase 1 
BRSK2                 0.170   BR serine/threonine kinase 2 
SNRK                  0.166   SNF related kinase 
SNRK                  0.166   SNF related kinase 
PRKAA2                0.156   AMP-activated protein kinase alpha 2 catalytic subun...
PRKAA1                0.156   protein kinase, AMP-activated, alpha 1 catalytic sub...
MGC42105              0.149   serine/threonine-protein kinase NIM1 
PRKAA1                0.148   protein kinase, AMP-activated, alpha 1 catalytic sub...
NUAK1                 0.148   AMPK-related protein kinase 5 
NUAK2                 0.148   NUAK family, SNF1-like kinase, 2 
MELK                  0.147   maternal embryonic leucine zipper kinase 
HUNK                  0.129   hormonally upregulated Neu-associated kinase 
TSSK1B                0.108   testis-specific serine kinase 1 
TSSK3                 0.104   testis-specific serine kinase 3 
TSSK2                 0.102   testis-specific serine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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