Guide to the Human Genome
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Name: TNIK Sequence: fasta or formatted (1297aa) NCBI GI: 239735588
Description:

TRAF2 and NCK interacting kinase isoform 6

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [1352aa] TRAF2 and NCK interacting kinase isoform 2
alt prot [1331aa] TRAF2 and NCK interacting kinase isoform 3
alt prot [1323aa] TRAF2 and NCK interacting kinase isoform 4
alt prot [1305aa] TRAF2 and NCK interacting kinase isoform 5
alt prot [1276aa] TRAF2 and NCK interacting kinase isoform 7
alt prot [1268aa] TRAF2 and NCK interacting kinase isoform 8
alt prot [1360aa] TRAF2 and NCK interacting kinase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         67           3
 C cysteine            0.7          9           1
 D aspartate           4.4         57           2
 E glutamate          10.4        135           6
 F phenylalanine       2.5         32           2
 G glycine             6.2         81           2
 H histidine           3.1         40           2
 I isoleucine          4.9         64           1
 K lysine              6.2         81           3
 L leucine             8.5        110           3
 M methionine          2.2         29           2
 N asparagine          3.9         51           1
 P proline             5.4         70           2
 Q glutamine           6.0         78           3
 R arginine            7.8        101           3
 S serine              8.6        112           6
 T threonine           4.8         62           2
 V valine              5.4         70           2
 W tryptophan          1.1         14           1
 Y tyrosine            2.6         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.997   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.982   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.979   TRAF2 and NCK interacting kinase isoform 1 
TNIK                  0.973   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.970   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.955   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.953   TRAF2 and NCK interacting kinase isoform 3 
MAP4K4                0.626   mitogen-activated protein kinase kinase kinase kinas...
MINK1                 0.609   misshapen/NIK-related kinase isoform 4 
MAP4K4                0.607   mitogen-activated protein kinase kinase kinase kinas...
MINK1                 0.601   misshapen/NIK-related kinase isoform 1 
MINK1                 0.600   misshapen/NIK-related kinase isoform 2 
MINK1                 0.595   misshapen/NIK-related kinase isoform 3 
MAP4K4                0.589   mitogen-activated protein kinase kinase kinase kinas...
NRK                   0.148   Nik related kinase 
MYO3A                 0.109   myosin IIIA 
MYO3B                 0.105   myosin IIIB isoform 1 
MYO3B                 0.105   myosin IIIB isoform 2 
STK4                  0.096   serine/threonine kinase 4 
MAP4K3                0.094   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.093   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.093   mitogen-activated protein kinase kinase kinase kinas...
STK3                  0.091   serine/threonine kinase 3 
STK25                 0.091   serine/threonine kinase 25 
MST4                  0.091   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK24                 0.089   serine/threonine kinase 24 isoform b 
STK24                 0.089   serine/threonine kinase 24 isoform a 
MAP4K2                0.087   mitogen-activated protein kinase kinase kinase kinas...
TAOK1                 0.087   TAO kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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