CTDP1 34710

Name: CTDP1	Sequence: fasta or formatted (961aa)		NCBI GI: 67188445
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 isoform FCP1a		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [867aa] CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) p...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 90 3 C cysteine 1.8 17 1 D aspartate 5.7 55 2 E glutamate 10.5 101 6 F phenylalanine 2.1 20 1 G glycine 8.2 79 2 H histidine 2.5 24 1 I isoleucine 2.6 25 2 K lysine 4.6 44 2 L leucine 8.0 77 2 M methionine 1.8 17 1 N asparagine 2.1 20 1 P proline 8.8 85 3 Q glutamine 4.7 45 2 R arginine 7.4 71 2 S serine 8.5 82 4 T threonine 4.1 39 2 V valine 5.4 52 2 W tryptophan 0.6 6 1 Y tyrosine 1.2 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDP1 0.839 CTD (carboxy-terminal domain, RNA polymerase II, pol... RP1L1 0.025 retinitis pigmentosa 1-like 1 PRB3 0.021 proline-rich protein BstNI subfamily 3 precursor [H... RPGR 0.019 retinitis pigmentosa GTPase regulator isoform C [Hom... PRB2 0.019 proline-rich protein BstNI subfamily 2 CTDSPL2 0.018 CTD (carboxy-terminal domain, RNA polymerase II, po... CCDC96 0.017 coiled-coil domain containing 96 PRB4 0.016 proline-rich protein BstNI subfamily 4 precursor [Ho... PRB1 0.015 proline-rich protein BstNI subfamily 1 isoform 1 pre... TGOLN2 0.015 trans-golgi network protein 2 APC2 0.015 adenomatosis polyposis coli 2 OGFR 0.014 opioid growth factor receptor IWS1 0.014 IWS1 homolog TNRC18 0.013 trinucleotide repeat containing 18 COL25A1 0.013 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.013 collagen, type XXV, alpha 1 isoform 2 COL5A1 0.013 alpha 1 type V collagen preproprotein COL9A3 0.013 alpha 3 type IX collagen SLC24A1 0.012 solute carrier family 24 (sodium/potassium/calcium ex... SMTNL1 0.012 smoothelin-like 1 C1orf173 0.012 hypothetical protein LOC127254 MYST4 0.012 MYST histone acetyltransferase (monocytic leukemia)... MARCO 0.011 macrophage receptor with collagenous structure PCLO 0.011 piccolo isoform 2 PCLO 0.011 piccolo isoform 1 DULLARD 0.011 dullard homolog DULLARD 0.011 dullard homolog COL2A1 0.011 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.011 collagen, type II, alpha 1 isoform 2 precursor [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.