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Search of human proteins with 10190664
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10190664 twisted gastrulation [Homo sapiens]
(223 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10190664 twisted gastrulation [Homo sapiens] 491 e-139
gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens] 36 0.023
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 34 0.11
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] 33 0.15
gi|29244926 corin [Homo sapiens] 33 0.20
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 33 0.20
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 33 0.20
gi|134031945 SCO-spondin [Homo sapiens] 33 0.26
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 32 0.33
gi|5031905 MyoD family inhibitor [Homo sapiens] 32 0.33
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 32 0.33
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 32 0.44
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 32 0.44
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 32 0.57
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 31 0.74
gi|93204871 netrin 4 [Homo sapiens] 31 0.74
gi|122937257 thrombospondin, type I, domain containing 7B [Homo ... 31 0.74
gi|169205963 PREDICTED: hypothetical protein, partial [Homo sapi... 30 1.3
gi|55770876 notch4 preproprotein [Homo sapiens] 30 1.3
gi|4504777 integrin, beta 7 [Homo sapiens] 30 1.3
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 30 1.3
gi|62868210 GIY-YIG domain containing 1 isoform 2 [Homo sapiens] 30 2.2
gi|62868208 GIY-YIG domain containing 1 isoform 1 [Homo sapiens] 30 2.2
gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3... 30 2.2
gi|239758032 PREDICTED: keratin associated protein 4-8 isoform 2... 30 2.2
gi|239758030 PREDICTED: keratin associated protein 4-8 isoform 1... 30 2.2
gi|239756798 PREDICTED: similar to keratin associated protein 4-... 30 2.2
gi|239756796 PREDICTED: similar to keratin associated protein 4-... 30 2.2
gi|239756794 PREDICTED: similar to keratin associated protein 4-... 30 2.2
gi|157384998 low density lipoprotein receptor-related protein 4 ... 30 2.2
>gi|10190664 twisted gastrulation [Homo sapiens]
Length = 223
Score = 491 bits (1264), Expect = e-139
Identities = 223/223 (100%), Positives = 223/223 (100%)
Query: 1 MKLHYVAVLTLAILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECM 60
MKLHYVAVLTLAILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECM
Sbjct: 1 MKLHYVAVLTLAILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECM 60
Query: 61 LCLGALWDECCDCVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALTEGDTQLNWNIVS 120
LCLGALWDECCDCVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALTEGDTQLNWNIVS
Sbjct: 61 LCLGALWDECCDCVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALTEGDTQLNWNIVS 120
Query: 121 FPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQ 180
FPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQ
Sbjct: 121 FPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQ 180
Query: 181 CKISCESMGASKYRWFHNACCECIGPECIDYGSKTVKCMNCMF 223
CKISCESMGASKYRWFHNACCECIGPECIDYGSKTVKCMNCMF
Sbjct: 181 CKISCESMGASKYRWFHNACCECIGPECIDYGSKTVKCMNCMF 223
>gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens]
Length = 1590
Score = 36.2 bits (82), Expect = 0.023
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
Query: 25 SCNKALCASDVS---KCLIQELCQCRPGEGNCSCCKE-----CMLCLGALWDECCDC-VG 75
+C ALC D KC+ +CQC PG G +C +E C L C C G
Sbjct: 1324 NCQTALCDPDCKNHGKCIKPNICQCLPGHGGATCDEEHCNPPCQHGGTCLAGNLCTCPYG 1383
Query: 76 MCNPR 80
PR
Sbjct: 1384 FVGPR 1388
Score = 32.7 bits (73), Expect = 0.26
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 22 ESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPRN 81
E++ CN+ + +CL ++CQC+PG +C AL D C G CN N
Sbjct: 1390 ETMVCNRH--CENGGQCLTPDICQCKPGWYGPTCST-------ALCDPVCLNGGSCNKPN 1440
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 33.9 bits (76), Expect = 0.11
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 22 ESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECC--DCVGMCNP 79
+S C C+S Q C C+P SCCK C C CC C C+
Sbjct: 167 QSSCCKPCCCSSGCGSSCCQSSC-CKPCCSQSSCCKPC-CCSSGCGSSCCQSSCCKPCSS 224
Query: 80 RNYSDTP 86
++ P
Sbjct: 225 QSSCCVP 231
Score = 32.3 bits (72), Expect = 0.33
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 23 SLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNP 79
S C + C S K + C+P SCCK C C CC C P
Sbjct: 138 SSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPC-CCSSGCGSSCCQS-SCCKP 192
>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
Length = 1503
Score = 33.5 bits (75), Expect = 0.15
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 19 WLPESLSCNKALCASDVSKCL-IQELCQC-RPGEGNCSCCKECMLC 62
W+P +C+ +C V C IQ + C +P +G CC +C C
Sbjct: 909 WVPPDSACSSCVCHEGVVTCARIQCISSCAQPRQGPHDCCPQCSDC 954
>gi|29244926 corin [Homo sapiens]
Length = 1042
Score = 33.1 bits (74), Expect = 0.20
Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 18/135 (13%)
Query: 24 LSCNKALCASDVSKCLIQELCQCRPGEGNCS-----CCKECMLCLGALWDECCDCVG--- 75
+ C C +C E C+ E NCS C + CL ++ C D G
Sbjct: 385 VECRNGQCIPSTFQCDGDEDCKDGSDEENCSVIQTSCQEGDQRCL---YNPCLDSCGGSS 441
Query: 76 MCNPRNYSDTPPTSKSTVEEL-------HEPIPSLFRALTEGDTQLNWNIVSFPVAEELS 128
+C+P N + + EL P+ F T+ + ++W FP + +
Sbjct: 442 LCDPNNSLNNCSQCEPITLELCMNLPYNSTSYPNYFGHRTQKEASISWESSLFPALVQTN 501
Query: 129 HHENLVSFLETVNQP 143
++ L+ F T+ P
Sbjct: 502 CYKYLMFFSCTILVP 516
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 33.1 bits (74), Expect = 0.20
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 22 ESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNP 79
+S C C+S Q C C+P SCCK C C CC C P
Sbjct: 116 QSSCCKPCSCSSGCGSSCCQSSC-CKPCCSQSSCCKPC-CCSSGCGSSCCQS-SCCKP 170
Score = 30.8 bits (68), Expect = 0.97
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 25 SCNK-ALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNP 79
SC K C+S Q C C+P SCCK C C CC C P
Sbjct: 89 SCYKPCCCSSGCGSSCCQSSC-CKPCCSQSSCCKPCS-CSSGCGSSCCQS-SCCKP 141
Score = 30.4 bits (67), Expect = 1.3
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 8/60 (13%)
Query: 23 SLSCNKALCASDVSK-CLIQELCQCRPGEGNCSCCKEC--MLCLGALWDECCDCVGMCNP 79
S C + C S K C Q C C+P CSC C C + CC C P
Sbjct: 97 SSGCGSSCCQSSCCKPCCSQSSC-CKP----CSCSSGCGSSCCQSSCCKPCCSQSSCCKP 151
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 33.1 bits (74), Expect = 0.20
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 23 SLSCNKALCASDVSKCLIQELCQCRPGEGN----CSCCKECMLCLGALWDECCDC 73
S + +K C S S+C + C C G G+ SCCK C CC C
Sbjct: 222 SCAGSKGGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQC 276
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 32.7 bits (73), Expect = 0.26
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 21 PESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGM 76
P LSC C S +C ++ CQ E C +C+L ++W C G+
Sbjct: 2466 PSQLSCGSGECLSAERRCDLRPDCQDGSDEDG---CVDCVLAPWSVWSSCSRSCGL 2518
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 32.3 bits (72), Expect = 0.33
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 9/51 (17%)
Query: 19 WLPESLSCNKALCASD---VSKCLIQE--LCQCRPGEGNCSCCKE--CMLC 62
W+PE LSC + C+SD C ++ +C CRPG C+ K+ C LC
Sbjct: 89 WVPECLSCG-SRCSSDQVETQACTREQNRICTCRPG-WYCALSKQEGCRLC 137
>gi|5031905 MyoD family inhibitor [Homo sapiens]
Length = 246
Score = 32.3 bits (72), Expect = 0.33
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 8 VLTLAILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCK-ECMLCLGAL 66
+L+ FLT L C S CL C C G G C+ C C L G L
Sbjct: 168 ILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL----CCCCCGSGECADCDLPCDLDCGIL 223
Query: 67 WDECC---DCVGMC 77
D CC DC+ +C
Sbjct: 224 -DACCESADCLEIC 236
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 32.3 bits (72), Expect = 0.33
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 26 CNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNP 79
C C+S Q C C+P CSCCK C G CC C P
Sbjct: 83 CKPCCCSSGCGSSCCQCSC-CKPYCSQCSCCKPCCSSSGR-GSSCCQS-SCCKP 133
Score = 30.8 bits (68), Expect = 0.97
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Query: 25 SCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNP 79
SC K C S C C CSCCK C C CC C C P
Sbjct: 56 SCGKRGCGSCGGSKGGCGSCGC----SQCSCCKPC-CCSSGCGSSCCQC-SCCKP 104
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 32.0 bits (71), Expect = 0.44
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 25 SCNK-ALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNP 79
SC K C+S Q C C+P SCCK C C CC CNP
Sbjct: 96 SCYKPCCCSSGCGSSCCQSSC-CKPCCCQSSCCKPC-CCSSGCGSSCCQS-SCCNP 148
Score = 28.5 bits (62), Expect = 4.8
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 11/61 (18%)
Query: 23 SLSCNKALCASDVSK-CLIQELCQCRP-------GEGNC--SCCKECMLCLGALWDECCD 72
S C + C S K C Q C C+P G C SCC C CC
Sbjct: 104 SSGCGSSCCQSSCCKPCCCQSSC-CKPCCCSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQ 162
Query: 73 C 73
C
Sbjct: 163 C 163
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 32.0 bits (71), Expect = 0.44
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 23 SLSCNKALCASDVSK-CLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDC 73
S C + C S K C Q C C P SCCK C CC C
Sbjct: 125 SSGCGSSCCQSSCCKPCCCQSSC-CVPVCCQSSCCKPCCCQSNCCVPVCCQC 175
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 31.6 bits (70), Expect = 0.57
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 30 LCASDV--SKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPRNYSDTPP 87
LCA + +C+ CQC PG C E C +W CD C+ N S P
Sbjct: 104 LCAQECVHGRCVAPNQCQCVPGWRGDDCSSE---CAPGMWGPQCD--KPCSCGNNSSCDP 158
Query: 88 TS 89
S
Sbjct: 159 KS 160
>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
Length = 1140
Score = 31.2 bits (69), Expect = 0.74
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 9/49 (18%)
Query: 37 KCLIQELCQCRPGEGNCSCCKECMLCLGALW-DEC---CDCV--GMCNP 79
+C+ CQC PG G +C C G W C C C +CNP
Sbjct: 117 RCIAPNTCQCEPGWGGTNCSSACD---GDHWGPHCTSRCQCKNGALCNP 162
>gi|93204871 netrin 4 [Homo sapiens]
Length = 628
Score = 31.2 bits (69), Expect = 0.74
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 11/45 (24%)
Query: 46 CRPGEGNCSC--------CKECMLCLGALWD---ECCDCVGMCNP 79
C P G+C C C CM+ D CDC G C+P
Sbjct: 413 CDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDCAGSCDP 457
>gi|122937257 thrombospondin, type I, domain containing 7B [Homo
sapiens]
Length = 1577
Score = 31.2 bits (69), Expect = 0.74
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 28 KALCASDVSKCLIQELCQCRPGEGNCSCCKEC-MLCLGALWDECCDCVGMCNPRNYSDTP 86
KA+C +D + + LC P SC C M C+ + W E C C+ +N SD
Sbjct: 536 KAVCQNDRGEDVSGSLCPVPPPPERKSCEIPCRMDCVLSEWTEWSSCSQSCSNKN-SDGK 594
Query: 87 PTSKSTV 93
T T+
Sbjct: 595 QTRSRTI 601
>gi|169205963 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 217
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 168 TVVYFDDCMSIHQCKISCESMGASKYRWFHNACCECI 204
T VY CM I+ C C A Y + H C CI
Sbjct: 60 TYVYMHICMCIYTCTYVCVYTHAHMYVYIHMHICMCI 96
>gi|55770876 notch4 preproprotein [Homo sapiens]
Length = 2003
Score = 30.4 bits (67), Expect = 1.3
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 26 CNKALCASDVSKCLIQE---LCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPR 80
C C + + C+ Q LCQC PG +C KE L A + C G C P+
Sbjct: 934 CESRPCQNGAT-CMAQPSGYLCQCAPGYDGQNCSKE----LDACQSQPCHNHGTCTPK 986
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 30.4 bits (67), Expect = 1.3
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 31 CASDVSKCLIQELCQCRPGEGNCSCCKECMLCL----GALWDECCDCVGMC 77
C+ D+ C+ E C G G C C C CL GAL D+C C C
Sbjct: 598 CSGDMDSCISPEGGLCS-GHGRCKC-NRCQ-CLDGYYGALCDQCPGCKTPC 645
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 30.4 bits (67), Expect = 1.3
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 23 SLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECC 71
S C + C S K + C+P SCCK C C CC
Sbjct: 166 SSGCGSSCCQSSCCKPYCCQSSCCKPYCCQSSCCKPCS-CFSGCGSSCC 213
>gi|62868210 GIY-YIG domain containing 1 isoform 2 [Homo sapiens]
Length = 161
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 38 CLIQELCQCRPG-----EGNCSCCKECMLCLGALW 67
CL +E Q PG EG C CC++ +L +W
Sbjct: 101 CLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIW 135
>gi|62868208 GIY-YIG domain containing 1 isoform 1 [Homo sapiens]
Length = 275
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 38 CLIQELCQCRPG-----EGNCSCCKECMLCLGALW 67
CL +E Q PG EG C CC++ +L +W
Sbjct: 215 CLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIW 249
>gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3
[Homo sapiens]
Length = 204
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 23 SLSCNKALCASDVSK--CLIQELCQ---CRPGEGNCSCCKECMLCLGALWDECCDCVGMC 77
S C + C S K C CQ CRP SCC+ +CC V C
Sbjct: 81 SSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCVSSCCKPQCCQSV-CC 139
Query: 78 NP 79
P
Sbjct: 140 QP 141
>gi|239758032 PREDICTED: keratin associated protein 4-8 isoform 2
[Homo sapiens]
Length = 193
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 23 SLSCNKALCASDVSK--CLIQELCQ---CRPGEGNCSCCKECMLCLGALWDECCDCVGMC 77
S C + C S K C CQ CRP SCC+ +CC V C
Sbjct: 70 SSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCVSSCCKPQCCQSV-CC 128
Query: 78 NP 79
P
Sbjct: 129 QP 130
>gi|239758030 PREDICTED: keratin associated protein 4-8 isoform 1
[Homo sapiens]
Length = 220
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 23 SLSCNKALCASDVSK--CLIQELCQ---CRPGEGNCSCCKECMLCLGALWDECCDCVGMC 77
S C + C S K C CQ CRP SCC+ +CC V C
Sbjct: 97 SSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCVSSCCKPQCCQSV-CC 155
Query: 78 NP 79
P
Sbjct: 156 QP 157
>gi|239756798 PREDICTED: similar to keratin associated protein 4-12
isoform 3 [Homo sapiens]
Length = 204
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 23 SLSCNKALCASDVSK--CLIQELCQ---CRPGEGNCSCCKECMLCLGALWDECCDCVGMC 77
S C + C S K C CQ CRP SCC+ +CC V C
Sbjct: 81 SSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCVSSCCKPQCCQSV-CC 139
Query: 78 NP 79
P
Sbjct: 140 QP 141
>gi|239756796 PREDICTED: similar to keratin associated protein 4-12
isoform 2 [Homo sapiens]
Length = 193
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 23 SLSCNKALCASDVSK--CLIQELCQ---CRPGEGNCSCCKECMLCLGALWDECCDCVGMC 77
S C + C S K C CQ CRP SCC+ +CC V C
Sbjct: 70 SSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCVSSCCKPQCCQSV-CC 128
Query: 78 NP 79
P
Sbjct: 129 QP 130
>gi|239756794 PREDICTED: similar to keratin associated protein 4-12
isoform 1 [Homo sapiens]
Length = 220
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 23 SLSCNKALCASDVSK--CLIQELCQ---CRPGEGNCSCCKECMLCLGALWDECCDCVGMC 77
S C + C S K C CQ CRP SCC+ +CC V C
Sbjct: 97 SSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCVSSCCKPQCCQSV-CC 155
Query: 78 NP 79
P
Sbjct: 156 QP 157
>gi|157384998 low density lipoprotein receptor-related protein 4
[Homo sapiens]
Length = 1905
Score = 29.6 bits (65), Expect = 2.2
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 12 AILMFLTW----LPESLSCNKALCASDVSKCLIQELCQCRPGEGNCS-----CCKECMLC 62
A+ FL W + + CN D S Q+ C+ R GE NC+ C ++C +
Sbjct: 313 ALDQFLCWNGRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMV 372
Query: 63 LGALWDEC 70
GA+ C
Sbjct: 373 RGAVQCTC 380
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.134 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,205,078
Number of Sequences: 37866
Number of extensions: 495964
Number of successful extensions: 2165
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 2012
Number of HSP's gapped (non-prelim): 224
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.