Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 18379353
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18379353 WAP four-disulfide core domain 1 precursor [Homo
sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18379353 WAP four-disulfide core domain 1 precursor [Homo sap... 476 e-135
gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens] 40 0.002
gi|4507065 secretory leukocyte peptidase inhibitor precursor [Ho... 39 0.005
gi|21717822 WAP four-disulfide core domain 5 precursor [Homo sap... 37 0.010
gi|56699495 WAP four-disulfide core domain 2 precursor [Homo sap... 36 0.023
gi|24497589 aristaless related homeobox [Homo sapiens] 35 0.050
gi|58082087 late cornified envelope-like proline-rich 1 [Homo sa... 35 0.050
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 35 0.066
gi|32307109 WAP four-disulfide core domain 3 precursor [Homo sap... 34 0.086
gi|203096856 kinesin family member 7 [Homo sapiens] 33 0.19
gi|23397672 homeobox D4 [Homo sapiens] 33 0.25
gi|4505787 elafin preproprotein [Homo sapiens] 33 0.25
gi|32307177 forkhead box G1 [Homo sapiens] 33 0.25
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 32 0.33
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 32 0.33
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 32 0.33
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 32 0.33
gi|188219563 hypothetical protein LOC126731 [Homo sapiens] 32 0.33
gi|32483397 dopamine receptor D4 [Homo sapiens] 32 0.43
gi|153946389 WAP four-disulfide core domain 8 precursor [Homo sa... 32 0.43
gi|153946387 WAP four-disulfide core domain 8 precursor [Homo sa... 32 0.43
gi|116235485 delta-notch-like EGF repeat-containing transmembran... 32 0.43
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 32 0.56
gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 32 0.56
gi|20069858 WAP four-disulfide core domain 12 precursor [Homo sa... 32 0.56
gi|223941923 OTU domain containing 1 [Homo sapiens] 31 0.73
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 31 0.73
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 31 0.73
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 31 0.73
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 31 0.73
>gi|18379353 WAP four-disulfide core domain 1 precursor [Homo
sapiens]
Length = 220
Score = 476 bits (1225), Expect = e-135
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MPLTGVGPGSCRRQIIRALCLLLLLLHAGSAKNIWKRALPARLAEKSRAEEAGAPGGPRQ 60
MPLTGVGPGSCRRQIIRALCLLLLLLHAGSAKNIWKRALPARLAEKSRAEEAGAPGGPRQ
Sbjct: 1 MPLTGVGPGSCRRQIIRALCLLLLLLHAGSAKNIWKRALPARLAEKSRAEEAGAPGGPRQ 60
Query: 61 PRADRCPPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQP 120
PRADRCPPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQP
Sbjct: 61 PRADRCPPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQP 120
Query: 121 KPRWLGGNGWLLDGPEEVLQAEACSTTEDGAEPLLCPSGYECHILSPGDVAEGIPNRGQC 180
KPRWLGGNGWLLDGPEEVLQAEACSTTEDGAEPLLCPSGYECHILSPGDVAEGIPNRGQC
Sbjct: 121 KPRWLGGNGWLLDGPEEVLQAEACSTTEDGAEPLLCPSGYECHILSPGDVAEGIPNRGQC 180
Query: 181 VKQRRQADGRILRHKLYKEYPEGDSKNVAEPGRGQQKHFQ 220
VKQRRQADGRILRHKLYKEYPEGDSKNVAEPGRGQQKHFQ
Sbjct: 181 VKQRRQADGRILRHKLYKEYPEGDSKNVAEPGRGQQKHFQ 220
>gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens]
Length = 680
Score = 40.0 bits (92), Expect = 0.002
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 66 CPPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYAC 104
CP P + A C+ D+EC ++CC NGC + C
Sbjct: 134 CPAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTC 172
>gi|4507065 secretory leukocyte peptidase inhibitor precursor [Homo
sapiens]
Length = 132
Score = 38.5 bits (88), Expect = 0.005
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 56 GGPRQPRADRCPPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPP 111
G + +A CPP ++ + CQ+D +CP +RCC + C CL+ V P
Sbjct: 25 GSGKSFKAGVCPPK-KSAQCLRYKKPECQSDWQCPGKKRCCPDTCGIKCLDPVDTP 79
Score = 30.8 bits (68), Expect = 0.95
Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 11/52 (21%)
Query: 68 PPPRTLPPGACQAAR-----------CQADSECPRHRRCCYNGCAYACLEAV 108
P P PG C C+ D +C R +CC C +C+ V
Sbjct: 79 PNPTRRKPGKCPVTYGQCLMLNPPNFCEMDGQCKRDLKCCMGMCGKSCVSPV 130
>gi|21717822 WAP four-disulfide core domain 5 precursor [Homo
sapiens]
Length = 123
Score = 37.4 bits (85), Expect = 0.010
Identities = 29/95 (30%), Positives = 37/95 (38%), Gaps = 27/95 (28%)
Query: 17 RALCLLLLLLHAGSAKNIWKRALPARLAEKSRAEEAGAPGGPRQPRADRCPPPPRTLPPG 76
++L LL LL GS LPA K + G CPP G
Sbjct: 4 QSLLLLGALLAVGSQ-------LPAVFGRKKGEKSGG------------CPPDD-----G 39
Query: 77 ACQAA---RCQADSECPRHRRCCYNGCAYACLEAV 108
C + +C DS+CP R+CCY C C+ V
Sbjct: 40 PCLLSVPDQCVEDSQCPLTRKCCYRACFRQCVPRV 74
Score = 30.4 bits (67), Expect = 1.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 83 CQADSECPRHRRCCYNGCAYAC 104
C DS+C +RCC++ C C
Sbjct: 96 CHKDSDCSGKKRCCHSACGRDC 117
>gi|56699495 WAP four-disulfide core domain 2 precursor [Homo
sapiens]
Length = 124
Score = 36.2 bits (82), Expect = 0.023
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 66 CPPPPRTLPPGACQAARCQADSECPRHRRCCYNGC 100
CP P +CQ DS+CP +CC NGC
Sbjct: 80 CPQVNINFPQLGLCRDQCQVDSQCPGQMKCCRNGC 114
Score = 30.8 bits (68), Expect = 0.95
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 83 CQADSECPRHRRCCYNGCAYAC 104
C +DSEC + +CC GCA C
Sbjct: 49 CVSDSECADNLKCCSAGCATFC 70
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 35.0 bits (79), Expect = 0.050
Identities = 45/141 (31%), Positives = 52/141 (36%), Gaps = 36/141 (25%)
Query: 41 ARLAEKSRAEEAGAPGGPRQPRADRCPPPPRTLPPG-----------ACQAARCQAD--- 86
A A + A A A PR + PPPP T PG A AA D
Sbjct: 101 AAAAAAAAAAAAAAATATAGPRGEAPPPPPPTARPGERPDGAGAAAAAAAAAAAAWDTLK 160
Query: 87 -SECP-----RHRRCCYNGCAYACLEAVPPPPVLDWL------VQPKPRWLGGNGWLLDG 134
S+ P R + NG + VPPPP LD L P+ R LG G G
Sbjct: 161 ISQAPQVSISRSKSYRENGAPF-----VPPPPALDELGGPGGVTHPEER-LGVAG----G 210
Query: 135 PEEVLQAEACSTTEDGAEPLL 155
P A + TED E LL
Sbjct: 211 PGSAPAAGGGTGTEDDEEELL 231
>gi|58082087 late cornified envelope-like proline-rich 1 [Homo
sapiens]
Length = 98
Score = 35.0 bits (79), Expect = 0.050
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 10/53 (18%)
Query: 64 DRCPPPPRTLP-----PGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPP 111
++CP PP+ LP P +C C CP C + C +AC PPP
Sbjct: 50 EKCPAPPKCLPCPSQSPSSCPPQPC--TKPCPPK---CPSSCPHACPPPCPPP 97
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 34.7 bits (78), Expect = 0.066
Identities = 16/51 (31%), Positives = 19/51 (37%)
Query: 55 PGGPRQPRADRCPPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYACL 105
PG P CPPPP + P AC A + H C+ CL
Sbjct: 96 PGPAAAPTPPPCPPPPASPAPPACAAEPVPGVAGLRNHGNTCFMNATLQCL 146
>gi|32307109 WAP four-disulfide core domain 3 precursor [Homo
sapiens]
Length = 231
Score = 34.3 bits (77), Expect = 0.086
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 66 CPPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYACL 105
CP P LP C+ C D+ CP+ +CC GC CL
Sbjct: 126 CPADP--LP---CEEL-CDGDASCPQGHKCCSTGCGRTCL 159
Score = 32.3 bits (72), Expect = 0.33
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 83 CQADSECPRHRRCCYNGCAYAC 104
CQ D CP ++CC GC C
Sbjct: 44 CQGDELCPAEQKCCTTGCGRIC 65
Score = 32.3 bits (72), Expect = 0.33
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 20/93 (21%)
Query: 70 PRTLPPGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQPKPRWLGGNG 129
PR + +C RC D CP ++CC GC +C+ + + ++ GG
Sbjct: 77 PRVIRKQSC-LKRCITDETCPGVKKCCTLGCNKSCVVPISKQKLAEF---------GG-- 124
Query: 130 WLLDGPEEVLQAEACSTTEDGAEPLLCPSGYEC 162
+ P + L C DG CP G++C
Sbjct: 125 ---ECPADPL---PCEELCDG--DASCPQGHKC 149
Score = 32.3 bits (72), Expect = 0.33
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 83 CQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQPKPRW 124
C D C +CC +GC C+ PPVL + P W
Sbjct: 182 CVMDENCQAGEKCCKSGCGRFCV-----PPVLPPKLTMNPNW 218
>gi|203096856 kinesin family member 7 [Homo sapiens]
Length = 1343
Score = 33.1 bits (74), Expect = 0.19
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 25 LLHAGSAKNIWKRALPARLAEKSRAEEAGAPG--GPRQPRAD-------RCPPPPRTLPP 75
L +A A+NI RA E R E A G GP + R++ R P P T
Sbjct: 340 LNYASRAQNIRNRATVNWRPEAERPPEETASGARGPPRHRSETRIIHRGRRAPGPAT--- 396
Query: 76 GACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQPKPR-WL 125
A AA + +EC R+R C AY+ L + P L K R WL
Sbjct: 397 -ASAAAAMRLGAECARYRAC--TDAAYSLLRELQAEPGLPGAAARKVRDWL 444
>gi|23397672 homeobox D4 [Homo sapiens]
Length = 255
Score = 32.7 bits (73), Expect = 0.25
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 38 ALPARLAEKSRAEEAGAPGGPRQPRADRCPPPPRTLPPGACQAARCQADSE 88
ALPAR +E G PGG + CP PP PP AR + S+
Sbjct: 72 ALPAR----GHGQEPGGPGGHYAAPGEPCPAPPAP-PPAPLPGARAYSQSD 117
>gi|4505787 elafin preproprotein [Homo sapiens]
Length = 117
Score = 32.7 bits (73), Expect = 0.25
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 11/46 (23%)
Query: 70 PRTLPPGACQAA-----------RCQADSECPRHRRCCYNGCAYAC 104
P + PG+C RC D++CP ++CC C AC
Sbjct: 68 PVSTKPGSCPIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMAC 113
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 32.7 bits (73), Expect = 0.25
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 11/86 (12%)
Query: 54 APGGPRQPRADRCPPPPRTLP-PGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPP 112
AP P P+ + PPPP P P + A D + P+ L PPPP
Sbjct: 62 APQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQ----------LLLPPPPPPP 111
Query: 113 VLDWLVQPKPRWLGGNGWLLDGPEEV 138
L K LGG G GP E+
Sbjct: 112 PAAALDGAKADGLGGKGEPGGGPGEL 137
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 32.3 bits (72), Expect = 0.33
Identities = 56/241 (23%), Positives = 77/241 (31%), Gaps = 34/241 (14%)
Query: 7 GPGSCRRQIIRALCLLLLLLHAGSAKNIWKRALPARLAEKSRAEEAGAPGGPRQPRA--- 63
G + R ++ AL L LL + ++ P + + + E PG +PRA
Sbjct: 1473 GQPATREHLLMALADLDELLIRATFSSV-----PLAASISAVSLEVAQPGPSNRPRALEV 1527
Query: 64 --DRCPP-----------PPRT-----LPPGACQAARCQADSEC--PRHRRC--CYNGCA 101
RCPP P T L G C+ C S+ P C C + A
Sbjct: 1528 EECRCPPGYIGLSCQDCAPGYTRTGSGLYLGHCELCECNGHSDLCHPETGACSQCQHNAA 1587
Query: 102 YACLEAVPPPPVLDWLVQPKPRWLGGNGWLLDGPEEVLQAEACSTTEDGAEPLLCPSGYE 161
E P D P L PE + S G C GY
Sbjct: 1588 GEFCELCAPGYYGD-ATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYT 1646
Query: 162 ---CHILSPGDVAEGIPNRGQCVKQRRQADGRILRHKLYKEYPEGDSKNVAEPGRGQQKH 218
C PG V GQC+ + QA + H P+G S ++ G H
Sbjct: 1647 GQYCEQCGPGYVGNPSVQGGQCLPETNQAPLVVEVHPARSIVPQGGSHSLRCQVSGSPPH 1706
Query: 219 F 219
+
Sbjct: 1707 Y 1707
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 32.3 bits (72), Expect = 0.33
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 42 RLAEKSRAEEAGAPGGPRQPRADRCPPPPRT----LPPGACQAARCQADSECPRHRRCCY 97
R ++R + G P R+PRA R P P +P G C + S PR RR
Sbjct: 110 REGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRLRV 169
Query: 98 NG 99
+G
Sbjct: 170 SG 171
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 32.3 bits (72), Expect = 0.33
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 42 RLAEKSRAEEAGAPGGPRQPRADRCPPPPRT----LPPGACQAARCQADSECPRHRRCCY 97
R ++R + G P R+PRA R P P +P G C + S PR RR
Sbjct: 110 REGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRLRV 169
Query: 98 NG 99
+G
Sbjct: 170 SG 171
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 32.3 bits (72), Expect = 0.33
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 42 RLAEKSRAEEAGAPGGPRQPRADRCPPPPRT----LPPGACQAARCQADSECPRHRRCCY 97
R ++R + G P R+PRA R P P +P G C + S PR RR
Sbjct: 110 REGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRLRV 169
Query: 98 NG 99
+G
Sbjct: 170 SG 171
>gi|188219563 hypothetical protein LOC126731 [Homo sapiens]
Length = 270
Score = 32.3 bits (72), Expect = 0.33
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 9 GSCRRQIIRALCLLLLLLHAGSAKNIWKRALPARLAEKSRAEEAGAPGGPRQPRADRCPP 68
G C R+++ L LL A +W PA +E S + E+ GGP A PP
Sbjct: 24 GPCYRELLHYR-LGRRLLEQAHAPWLWDDWGPAGSSEDSASSESSGAGGPAPRCAPPSPP 82
Query: 69 PP 70
PP
Sbjct: 83 PP 84
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 32.0 bits (71), Expect = 0.43
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 20 CLLLLLLHAGSAKNI--WKRALPARLAEKSRAEEAG---------APGGPRQPRADRCPP 68
C L+LLL+ + + + W+ A A+L ++ +G AP P+ P C P
Sbjct: 205 CPLMLLLYWATFRGLQRWEVARRAKLHGRAPRRPSGPGPPSPTPPAPRLPQDPCGPDCAP 264
Query: 69 PPRTLPPGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPP 112
P LP G C A P+ C CA +PP P
Sbjct: 265 PAPGLPRGPCGPDCAPAAPSLPQDP--CGPDCAPPA-PGLPPDP 305
>gi|153946389 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 32.0 bits (71), Expect = 0.43
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 10/50 (20%)
Query: 75 PGACQAAR----------CQADSECPRHRRCCYNGCAYACLEAVPPPPVL 114
PG C R C D +C +++CC+ C C++ P +L
Sbjct: 48 PGLCPKERLTCTTELPDSCNTDFDCKEYQKCCFFACQKKCMDPFQEPCML 97
Score = 31.6 bits (70), Expect = 0.56
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 83 CQADSECPRHRRCCYNGCAYACLEA 107
C +D +CP+ +CC + C + C A
Sbjct: 169 CHSDIDCPQTDKCCESRCGFVCARA 193
>gi|153946387 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 32.0 bits (71), Expect = 0.43
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 10/50 (20%)
Query: 75 PGACQAAR----------CQADSECPRHRRCCYNGCAYACLEAVPPPPVL 114
PG C R C D +C +++CC+ C C++ P +L
Sbjct: 48 PGLCPKERLTCTTELPDSCNTDFDCKEYQKCCFFACQKKCMDPFQEPCML 97
Score = 31.6 bits (70), Expect = 0.56
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 83 CQADSECPRHRRCCYNGCAYACLEA 107
C +D +CP+ +CC + C + C A
Sbjct: 169 CHSDIDCPQTDKCCESRCGFVCARA 193
>gi|116235485 delta-notch-like EGF repeat-containing transmembrane
[Homo sapiens]
Length = 737
Score = 32.0 bits (71), Expect = 0.43
Identities = 40/154 (25%), Positives = 54/154 (35%), Gaps = 33/154 (21%)
Query: 2 PLTGVGPGSCRRQIIRALCLLLLLLHAGSAKNIWKRALPAR--LAEKSRAEEAGAPGG-- 57
P PG+ Q++ AL LLLLLL AG + +PA A A + GG
Sbjct: 3 PRRAQAPGA---QLLPALALLLLLLGAGPRGSSLANPVPAAPLSAPGPCAAQPCRNGGVC 59
Query: 58 PRQPRADRCPPPPRTLP------PGACQAARCQADSECPRHRRCCYNGCA---------Y 102
+P D P P P P A CQ ++ C + C+ Y
Sbjct: 60 TSRPEPDPQHPAPAGEPGYSCTCPAGISGANCQLVADPCASNPCHHGNCSSSSSSSSDGY 119
Query: 103 ACL-----------EAVPPPPVLDWLVQPKPRWL 125
C+ +A+P P W PR L
Sbjct: 120 LCICNEGYEGPNCEQALPSLPATGWTESMAPRQL 153
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 31.6 bits (70), Expect = 0.56
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 42 RLAEKSRAEEAGAPGGPRQPRADRCPPPPRTLPPGACQAAR 82
R A + R GA GGPR+ + R PP + PG+ + AR
Sbjct: 263 RGAGQPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAR 303
>gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo
sapiens]
Length = 402
Score = 31.6 bits (70), Expect = 0.56
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 39 LPARLAEKSRAEEAGAPGGPRQPR---ADRCPPPPRTLPPGACQAARCQADSECPR 91
LPA RA P G PR AD PPPP L P + A E PR
Sbjct: 52 LPASPETPERAAGPSEPLGEVAPRCRGADELPPPPLPLQPAGQEVAAAGDSGEGPR 107
Score = 28.5 bits (62), Expect = 4.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 53 GAPGGPRQPRADRCPPPPRTLPPG 76
GA G +P PPPP T PPG
Sbjct: 14 GAESGDAEPPPQPPPPPPPTPPPG 37
>gi|20069858 WAP four-disulfide core domain 12 precursor [Homo
sapiens]
Length = 111
Score = 31.6 bits (70), Expect = 0.56
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 82 RCQADSECPRHRRCCYNGCAYACL 105
+C D +C R+CCY C + C+
Sbjct: 48 QCHTDQDCLGERKCCYLHCGFKCV 71
>gi|223941923 OTU domain containing 1 [Homo sapiens]
Length = 481
Score = 31.2 bits (69), Expect = 0.73
Identities = 38/143 (26%), Positives = 46/143 (32%), Gaps = 23/143 (16%)
Query: 46 KSRAEEAGAPGGPRQPRADRCPPPPRT--LPPGACQAARCQADSECPRHRRCCYNGCAYA 103
K + GA G +P C P A AA+ A S C A A
Sbjct: 33 KVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPAAKMPAFSSC---FEVVSGAAAPA 89
Query: 104 CLEAVPP--------PPVLDWLVQPKPRWLGGNGWLLDGPEEVLQAEACSTTEDGAEPLL 155
A PP PP Q R LG + LL GP+ V A + G
Sbjct: 90 SAAAGPPGASCKPPLPPHYTSTAQITVRALGADRLLLHGPDPVPGAAGSAAAPRG----- 144
Query: 156 CPSGYECHILSPGDVAEGIPNRG 178
C +L+P A P RG
Sbjct: 145 -----RCLLLAPAPAAPVPPRRG 162
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 31.2 bits (69), Expect = 0.73
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 9/67 (13%)
Query: 52 AGAPGGPR--QPRADRCPPPPRTLPPGACQAA-----RCQADSECPRHRRCCYNGCAYAC 104
A P PR QPRA PPPP PP +A RCQ+ PR C A A
Sbjct: 109 APPPPPPRLAQPRAGPAPPPPG--PPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAP 166
Query: 105 LEAVPPP 111
+P P
Sbjct: 167 ASQLPRP 173
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 31.2 bits (69), Expect = 0.73
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 10/56 (17%)
Query: 67 PPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQPKP 122
PPPPR PP +A C PR R Y PPPP WL P P
Sbjct: 45 PPPPRLFPPHPA-SAFCPPRLSVPRRRDFLPAAAFY------PPPP---WLFAPLP 90
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 31.2 bits (69), Expect = 0.73
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 9/67 (13%)
Query: 52 AGAPGGPR--QPRADRCPPPPRTLPPGACQAA-----RCQADSECPRHRRCCYNGCAYAC 104
A P PR QPRA PPPP PP +A RCQ+ PR C A A
Sbjct: 109 APPPPPPRLAQPRAGPAPPPPG--PPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAP 166
Query: 105 LEAVPPP 111
+P P
Sbjct: 167 ASQLPRP 173
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 31.2 bits (69), Expect = 0.73
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 40 PARLAEKSRAEEAGAPGGPRQPRADRCPPPPRTLPPGACQAAR 82
PA S +P P PR R PPPP L AC+AAR
Sbjct: 453 PAATPHLSLPPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAAR 495
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,038,108
Number of Sequences: 37866
Number of extensions: 795128
Number of successful extensions: 4682
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 4435
Number of HSP's gapped (non-prelim): 378
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.