TRIM29 9593

Name: TRIM29	Sequence: fasta or formatted (588aa)		NCBI GI: 17402909
Description: tripartite motif protein TRIM29		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 36 2 C cysteine 2.0 12 1 D aspartate 4.9 29 2 E glutamate 9.0 53 2 F phenylalanine 3.7 22 1 G glycine 7.5 44 2 H histidine 2.4 14 1 I isoleucine 2.9 17 2 K lysine 8.0 47 2 L leucine 7.8 46 2 M methionine 2.6 15 1 N asparagine 4.9 29 2 P proline 4.8 28 3 Q glutamine 4.9 29 1 R arginine 5.6 33 2 S serine 10.0 59 3 T threonine 4.8 28 2 V valine 4.3 25 2 W tryptophan 0.9 5 1 Y tyrosine 2.9 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif protein TRIM29 TRIM16 0.103 tripartite motif-containing 16 TRIM25 0.077 tripartite motif-containing 25 TRIM47 0.075 tripartite motif-containing 47 LOC100291544 0.063 PREDICTED: hypothetical protein XP_002347761 TRIM6 0.047 tripartite motif-containing 6 isoform 2 TRIM6 0.047 tripartite motif-containing 6 isoform 1 TRIM6-TRIM34 0.047 tripartite motif-containing 6 and tripartite motif-c... TRIM21 0.044 tripartite motif protein 21 TRIM5 0.042 tripartite motif protein TRIM5 isoform alpha TRIM34 0.041 tripartite motif protein 34 isoform 3 TRIM34 0.041 tripartite motif protein 34 isoform 1 TRIM34 0.041 tripartite motif protein 34 isoform 1 TRIM5 0.041 tripartite motif protein TRIM5 isoform delta TRIM5 0.041 tripartite motif protein TRIM5 isoform gamma TRIM22 0.040 tripartite motif-containing 22 MID2 0.039 midline 2 isoform 2 MID2 0.039 midline 2 isoform 1 MID1 0.039 midline 1 MID1 0.039 midline 1 MID1 0.039 midline 1 TRIM8 0.038 tripartite motif-containing 8 TRIM65 0.037 tripartite motif-containing 65 TRIM39 0.036 tripartite motif-containing 39 isoform 2 TRIM39 0.036 tripartite motif-containing 39 isoform 1 TRIM42 0.034 tripartite motif-containing 42 TRIM36 0.034 tripartite motif-containing 36 isoform 1 TRIM58 0.032 tripartite motif-containing 58 TRIM41 0.032 tripartite motif-containing 41 isoform 2 TRIM41 0.032 tripartite motif-containing 41 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.