TRIM36 34248

Name: TRIM36	Sequence: fasta or formatted (728aa)		NCBI GI: 62865606
Description: tripartite motif-containing 36 isoform 1		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [61aa] tripartite motif-containing 36 isoform 3 alt prot [60aa] tripartite motif-containing 36 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 34 2 C cysteine 3.8 28 1 D aspartate 5.4 39 2 E glutamate 8.9 65 2 F phenylalanine 4.1 30 2 G glycine 5.1 37 2 H histidine 2.7 20 2 I isoleucine 5.6 41 2 K lysine 7.0 51 2 L leucine 9.1 66 3 M methionine 2.5 18 1 N asparagine 4.3 31 2 P proline 4.9 36 3 Q glutamine 3.8 28 1 R arginine 5.1 37 2 S serine 8.5 62 2 T threonine 5.2 38 2 V valine 4.7 34 2 W tryptophan 0.8 6 1 Y tyrosine 3.7 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 36 isoform 1 TRIM46 0.404 tripartite motif-containing 46 MID1 0.139 midline 1 MID1 0.139 midline 1 MID1 0.139 midline 1 MID2 0.131 midline 2 isoform 2 MID2 0.131 midline 2 isoform 1 TRIM9 0.120 tripartite motif protein 9 isoform 1 TRIM9 0.112 tripartite motif protein 9 isoform 2 TRIM67 0.095 tripartite motif-containing 67 TRIM55 0.088 tripartite motif-containing 55 isoform 3 TRIM55 0.088 tripartite motif-containing 55 isoform 1 TRIM55 0.088 tripartite motif-containing 55 isoform 2 TRIM54 0.085 ring finger protein 30 isoform 2 TRIM63 0.082 muscle specific ring finger protein 1 TRIM54 0.071 ring finger protein 30 isoform 1 FSD1L 0.061 fibronectin type III and SPRY domain containing 1-li... FSD1L 0.061 fibronectin type III and SPRY domain containing 1-l... TRIM55 0.058 tripartite motif-containing 55 isoform 4 TRIM42 0.056 tripartite motif-containing 42 FSD1 0.052 fibronectin type III and SPRY domain containing 1 [H... TRIM45 0.049 tripartite motif-containing 45 isoform 2 TRIM45 0.049 tripartite motif-containing 45 isoform 1 TRIM8 0.048 tripartite motif-containing 8 FSD2 0.039 fibronectin type III and SPRY domain containing 2 [H... CMYA5 0.036 cardiomyopathy associated 5 TRIM24 0.035 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.035 transcriptional intermediary factor 1 alpha isoform ... TRIM23 0.032 ADP-ribosylation factor domain protein 1 isoform gam... TRIM23 0.032 ADP-ribosylation factor domain protein 1 isoform bet... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.