TRIM8 4535

Name: TRIM8	Sequence: fasta or formatted (551aa)		NCBI GI: 148596968
Description: tripartite motif-containing 8		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 36 2 C cysteine 4.9 27 2 D aspartate 3.3 18 2 E glutamate 7.3 40 3 F phenylalanine 2.9 16 1 G glycine 6.0 33 2 H histidine 4.2 23 1 I isoleucine 1.8 10 1 K lysine 6.2 34 2 L leucine 9.6 53 2 M methionine 1.5 8 1 N asparagine 3.3 18 1 P proline 7.8 43 2 Q glutamine 7.8 43 2 R arginine 4.4 24 2 S serine 8.2 45 3 T threonine 3.4 19 1 V valine 6.9 38 1 W tryptophan 0.9 5 1 Y tyrosine 3.3 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 8 TRIM25 0.089 tripartite motif-containing 25 MID2 0.071 midline 2 isoform 2 MID2 0.071 midline 2 isoform 1 MID1 0.064 midline 1 MID1 0.064 midline 1 MID1 0.064 midline 1 TRIM47 0.063 tripartite motif-containing 47 TRIM36 0.062 tripartite motif-containing 36 isoform 1 TRIM62 0.061 tripartite motif-containing 62 TRIM11 0.058 tripartite motif-containing 11 LOC642446 0.052 PREDICTED: tripartite motif-containing protein 64B-... TRIM31 0.050 tripartite motif protein 31 TRIM63 0.050 muscle specific ring finger protein 1 LOC283116 0.050 PREDICTED: similar to ring finger protein 18 isofor... TRIM64 0.050 tripartite motif-containing 64 TRIM4 0.050 tripartite motif protein TRIM4 isoform beta TRIM27 0.049 ret finger protein LOC283116 0.049 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.049 PREDICTED: similar to ring finger protein 18 LOC283116 0.049 PREDICTED: similar to ring finger protein 18 TRIM4 0.049 tripartite motif protein TRIM4 isoform alpha TRIM39 0.048 tripartite motif-containing 39 isoform 1 TRIM50 0.048 tripartite motif protein 50A LOC653192 0.047 PREDICTED: Tripartite motif-containing protein 43-li... TRIM55 0.045 tripartite motif-containing 55 isoform 3 TRIM55 0.045 tripartite motif-containing 55 isoform 1 TRIM55 0.045 tripartite motif-containing 55 isoform 2 LOC120824 0.044 PREDICTED: similar to hCG1802386 LOC120824 0.044 PREDICTED: similar to hCG1802386 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.