LOC100291544 20728

Name: LOC100291544	Sequence: fasta or formatted (282aa)		NCBI GI: 239751227
Description: PREDICTED: hypothetical protein XP_002347761		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 24 3 C cysteine 6.4 18 2 D aspartate 6.7 19 2 E glutamate 8.5 24 3 F phenylalanine 3.2 9 2 G glycine 5.7 16 2 H histidine 3.2 9 2 I isoleucine 1.4 4 1 K lysine 2.8 8 1 L leucine 9.2 26 2 M methionine 1.1 3 1 N asparagine 2.5 7 1 P proline 9.9 28 2 Q glutamine 4.6 13 2 R arginine 4.3 12 2 S serine 9.2 26 2 T threonine 3.9 11 1 V valine 6.4 18 1 W tryptophan 1.1 3 1 Y tyrosine 1.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002347761 TRIM16 0.603 tripartite motif-containing 16 TRIM29 0.129 tripartite motif protein TRIM29 TRIM47 0.101 tripartite motif-containing 47 TRIM25 0.096 tripartite motif-containing 25 MID2 0.059 midline 2 isoform 2 MID2 0.059 midline 2 isoform 1 MID1 0.059 midline 1 MID1 0.059 midline 1 MID1 0.059 midline 1 TRIM8 0.047 tripartite motif-containing 8 RNF19B 0.042 ring finger protein 19B isoform a RNF19B 0.042 ring finger protein 19B isoform b TRIM42 0.042 tripartite motif-containing 42 TRIM39 0.038 tripartite motif-containing 39 isoform 2 TRIM39 0.038 tripartite motif-containing 39 isoform 1 TRIM45 0.033 tripartite motif-containing 45 isoform 2 TRIM45 0.033 tripartite motif-containing 45 isoform 1 TRIM27 0.031 ret finger protein BRD2 0.031 bromodomain containing 2 BRD2 0.031 bromodomain containing 2 TRIM34 0.028 tripartite motif protein 34 isoform 3 TRIM34 0.028 tripartite motif protein 34 isoform 1 TRIM34 0.028 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.028 tripartite motif-containing 6 and tripartite motif-c... TRIM46 0.028 tripartite motif-containing 46 TRIM11 0.026 tripartite motif-containing 11 TRIM5 0.026 tripartite motif protein TRIM5 isoform delta TRIM5 0.026 tripartite motif protein TRIM5 isoform gamma TRIM35 0.026 tripartite motif-containing 35 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.