CORO6 438

Name: CORO6	Sequence: fasta or formatted (472aa)		NCBI GI: 109627650
Description: coronin 6		Referenced in: Cytoskeleton WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 29 2 C cysteine 1.7 8 1 D aspartate 7.2 34 2 E glutamate 6.1 29 2 F phenylalanine 3.6 17 1 G glycine 6.4 30 4 H histidine 2.8 13 1 I isoleucine 6.1 29 3 K lysine 4.2 20 1 L leucine 8.5 40 2 M methionine 2.5 12 1 N asparagine 3.4 16 2 P proline 7.0 33 2 Q glutamine 3.6 17 2 R arginine 7.0 33 2 S serine 6.6 31 2 T threonine 5.9 28 2 V valine 7.4 35 2 W tryptophan 1.7 8 1 Y tyrosine 2.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coronin 6 CORO1C 0.715 coronin, actin binding protein, 1C isoform 1 CORO1B 0.707 coronin, actin binding protein, 1B CORO1B 0.707 coronin, actin binding protein, 1B CORO1A 0.650 coronin, actin binding protein, 1A CORO2B 0.409 coronin, actin binding protein, 2B CORO2A 0.397 coronin, actin binding protein, 2A CORO2A 0.397 coronin, actin binding protein, 2A CORO7 0.206 coronin 7 RBBP4 0.053 retinoblastoma binding protein 4 isoform c RBBP4 0.053 retinoblastoma binding protein 4 isoform b RBBP4 0.053 retinoblastoma binding protein 4 isoform a RBBP7 0.049 retinoblastoma binding protein 7 WSB1 0.048 WD repeat and SOCS box-containing 1 isoform 1 WSB1 0.048 WD repeat and SOCS box-containing 1 isoform 2 WDR5B 0.045 WD repeat domain 5B WDR17 0.044 WD repeat domain 17 isoform 2 WDR17 0.044 WD repeat domain 17 isoform 1 WDR26 0.044 WD repeat domain 26 isoform b WDR26 0.044 WD repeat domain 26 isoform a PEX7 0.041 peroxisomal biogenesis factor 7 TBL1XR1 0.040 transducin (beta)-like 1 X-linked receptor 1 CHAF1B 0.038 chromatin assembly factor 1 subunit B WDR51A 0.037 WD repeat domain 51A isoform 3 WDR51A 0.037 WD repeat domain 51A isoform 2 WDR51A 0.037 WD repeat domain 51A isoform 1 TAF5 0.036 TBP-associated factor 5 TBL1X 0.036 transducin beta-like 1X isoform b TBL1X 0.036 transducin beta-like 1X isoform b TBL1X 0.036 transducin beta-like 1X isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.