NWD1 9301

Name: NWD1	Sequence: fasta or formatted (1429aa)		NCBI GI: 169234742
Description: NACHT and WD repeat domain containing 1		Referenced in: WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 108 3 C cysteine 2.4 35 1 D aspartate 5.2 75 2 E glutamate 5.9 85 2 F phenylalanine 3.1 45 2 G glycine 6.4 91 2 H histidine 3.4 48 2 I isoleucine 3.5 50 2 K lysine 4.4 63 2 L leucine 13.9 199 3 M methionine 1.9 27 1 N asparagine 2.1 30 2 P proline 4.5 65 3 Q glutamine 4.7 67 2 R arginine 5.9 84 2 S serine 8.0 115 3 T threonine 5.0 72 2 V valine 7.9 113 2 W tryptophan 2.1 30 1 Y tyrosine 1.9 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NACHT and WD repeat domain containing 1 KIAA1239 0.069 hypothetical protein LOC57495 WDR69 0.015 WD repeat domain 69 SNRNP40 0.015 WD repeat domain 57 (U5 snRNP specific) PAFAH1B1 0.014 platelet-activating factor acetylhydrolase, isoform I... FBXW7 0.013 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.013 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.013 F-box and WD repeat domain containing 7 isoform 2 [H... WDR5 0.012 WD repeat domain 5 WDR5 0.012 WD repeat domain 5 ATG16L1 0.012 APG16 autophagy 16-like isoform 1 ATG16L1 0.012 APG16 autophagy 16-like isoform 2 GNB4 0.012 guanine nucleotide-binding protein, beta-4 subunit [... GNB3 0.012 guanine nucleotide-binding protein, beta-3 subunit [H... GNB2 0.012 guanine nucleotide-binding protein, beta-2 subunit [... WDR51A 0.011 WD repeat domain 51A isoform 2 WDR51A 0.011 WD repeat domain 51A isoform 1 WDR5B 0.011 WD repeat domain 5B PAK1IP1 0.011 PAK1 interacting protein 1 TBL3 0.011 transducin beta-like 3 GNB1 0.010 guanine nucleotide-binding protein, beta-1 subunit [... TEP1 0.010 telomerase-associated protein 1 WDR38 0.010 WD repeat domain 38 WDR86 0.010 WD repeat domain 86 APAF1 0.009 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.009 apoptotic peptidase activating factor 1 isoform b [Ho... WDR48 0.009 WD repeat domain 48 FBXW11 0.009 F-box and WD repeat domain containing 11 isoform C [... PLRG1 0.009 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... FBXW11 0.009 F-box and WD repeat domain containing 11 isoform A [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.