Guide to the Human Genome
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Name: OR52D1 Sequence: fasta or formatted (318aa) NCBI GI: 52353332
Description:

olfactory receptor, family 52, subfamily D, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         32           2
 C cysteine            2.8          9           1
 D aspartate           2.5          8           1
 E glutamate           1.9          6           1
 F phenylalanine       6.3         20           2
 G glycine             6.0         19           2
 H histidine           6.3         20           2
 I isoleucine          9.4         30           2
 K lysine              1.9          6           1
 L leucine            15.7         50           2
 M methionine          3.1         10           1
 N asparagine          3.1         10           1
 P proline             4.4         14           2
 Q glutamine           0.6          2           1
 R arginine            3.8         12           2
 S serine              6.3         20           2
 T threonine           4.7         15           2
 V valine              6.6         21           1
 W tryptophan          0.6          2           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily D, member 1... 
OR52E8                0.573   olfactory receptor, family 52, subfamily E, member 8...
OR52B2                0.565   olfactory receptor, family 52, subfamily B, member 2...
OR52J3                0.544   olfactory receptor, family 52, subfamily J, member ...
OR52E4                0.541   olfactory receptor, family 52, subfamily E, member 4...
OR52E6                0.532   olfactory receptor, family 52, subfamily E, member 6...
OR52H1                0.519   olfactory receptor, family 52, subfamily H, member 1...
OR52E2                0.519   olfactory receptor, family 52, subfamily E, member 2...
OR52N2                0.519   olfactory receptor, family 52, subfamily N, member 2...
OR52N4                0.518   olfactory receptor, family 52, subfamily N, member ...
OR52B6                0.515   olfactory receptor, family 52, subfamily B, member ...
OR52N1                0.505   olfactory receptor, family 52, subfamily N, member 1...
OR52L1                0.500   olfactory receptor, family 52, subfamily L, member ...
OR52R1                0.494   olfactory receptor, family 52, subfamily R, member ...
OR52K2                0.492   olfactory receptor, family 52, subfamily K, member 2...
OR52K1                0.485   olfactory receptor, family 52, subfamily K, member 1...
OR52B4                0.484   olfactory receptor, family 52, subfamily B, member 4...
OR52N5                0.479   olfactory receptor, family 52, subfamily N, member 5...
OR52M1                0.476   olfactory receptor, family 52, subfamily M, member 1...
OR51E2                0.474   olfactory receptor, family 51, subfamily E, member 2...
OR52A5                0.464   olfactory receptor, family 52, subfamily A, member 5...
OR51E1                0.463   olfactory receptor, family 51, subfamily E, member ...
OR51G2                0.459   olfactory receptor, family 51, subfamily G, member 2...
OR51L1                0.450   olfactory receptor, family 51, subfamily L, member 1...
OR52A1                0.450   olfactory receptor, family 52, subfamily A, member ...
OR51G1                0.448   olfactory receptor, family 51, subfamily G, member 1...
OR51M1                0.443   olfactory receptor, family 51, subfamily M, member 1...
OR52W1                0.443   olfactory receptor, family 52, subfamily W, member 1...
OR51I2                0.437   olfactory receptor, family 51, subfamily I, member 2...
OR51F2                0.429   olfactory receptor, family 51, subfamily F, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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