Guide to the Human Genome
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Search of human proteins with 169215823

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169215823 PREDICTED: hypothetical protein [Homo sapiens]
         (104 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169216028 PREDICTED: hypothetical protein [Homo sapiens]           209   4e-55
gi|169215823 PREDICTED: hypothetical protein [Homo sapiens]           209   4e-55
gi|169215622 PREDICTED: hypothetical protein [Homo sapiens]           209   4e-55
gi|169215620 PREDICTED: hypothetical protein [Homo sapiens]           209   4e-55
gi|239756124 PREDICTED: hypothetical protein [Homo sapiens]            33   0.037
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  31   0.18 
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            31   0.24 
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              30   0.31 
gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]            30   0.41 
gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]            30   0.41 
gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]            30   0.41 
gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]      30   0.41 
gi|61699226 pulmonary surfactant-associated protein D precursor ...    30   0.53 
gi|169208819 PREDICTED: similar to kinase D-interacting substrat...    30   0.53 
gi|169208593 PREDICTED: similar to kinase D-interacting substrat...    30   0.53 
gi|169208169 PREDICTED: similar to kinase D-interacting substrat...    30   0.53 
gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]        29   0.69 
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]            29   0.69 
gi|58293779 hypothetical protein LOC196541 [Homo sapiens]              29   0.69 
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]            29   0.91 
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]            29   0.91 
gi|239508745 PREDICTED: hypothetical protein [Homo sapiens]            29   0.91 
gi|35493853 otoferlin isoform c [Homo sapiens]                         29   0.91 
gi|35493868 otoferlin isoform b [Homo sapiens]                         29   0.91 
gi|35493860 otoferlin isoform d [Homo sapiens]                         29   0.91 
gi|34740331 otoferlin isoform a [Homo sapiens]                         29   0.91 
gi|153285461 fibroblast growth factor 2 [Homo sapiens]                 28   1.2  
gi|7662162 ALEX2 protein [Homo sapiens]                                28   1.5  
gi|29540562 ALEX2 protein [Homo sapiens]                               28   1.5  
gi|41393599 coproporphyrinogen oxidase [Homo sapiens]                  28   2.0  

>gi|169216028 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 104

 Score =  209 bits (532), Expect = 4e-55
 Identities = 104/104 (100%), Positives = 104/104 (100%)

Query: 1   MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60
           MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG
Sbjct: 1   MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60

Query: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA 104
           TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA
Sbjct: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA 104


>gi|169215823 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 104

 Score =  209 bits (532), Expect = 4e-55
 Identities = 104/104 (100%), Positives = 104/104 (100%)

Query: 1   MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60
           MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG
Sbjct: 1   MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60

Query: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA 104
           TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA
Sbjct: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA 104


>gi|169215622 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 104

 Score =  209 bits (532), Expect = 4e-55
 Identities = 104/104 (100%), Positives = 104/104 (100%)

Query: 1   MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60
           MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG
Sbjct: 1   MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60

Query: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA 104
           TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA
Sbjct: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA 104


>gi|169215620 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 104

 Score =  209 bits (532), Expect = 4e-55
 Identities = 104/104 (100%), Positives = 104/104 (100%)

Query: 1   MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60
           MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG
Sbjct: 1   MTGEGDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60

Query: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA 104
           TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA
Sbjct: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLAA 104


>gi|239756124 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 348

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 29  AAAAQSRFSSPAGTRLAGKF-----VSSSRNGMAGRGTETALAEEKLGVPKARGPGRRGE 83
           A +A    S P   RLAG F       SSR   +G+G  +  A    G P+ R P  R  
Sbjct: 64  ARSAPELASGPPRPRLAGHFDPECSTRSSRTDSSGKGQSSLRASP--GPPRRRPPSLRSA 121

Query: 84  APQQPGFSLAGQRLGAPRL 102
            P+ P       +L APR+
Sbjct: 122 VPRIPRLRPERYQLVAPRV 140


>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 653

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 8/94 (8%)

Query: 9   KTCGGGAAGSWS-----TESL---PRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60
           ++CG G   SW+     ++SL   P  E+   QS  S P     +  + + +R      G
Sbjct: 385 ESCGFGVRLSWAQGVSDSQSLCSGPSSESDCVQSHLSLPLCFAESHMWETEARQSWGLLG 444

Query: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAG 94
              AL  E L V +A G       PQ P   +AG
Sbjct: 445 AVPALVPEALAVTRALGCPILAWPPQPPAHLVAG 478


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 9/106 (8%)

Query: 5   GDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNG--------- 55
           G K ++ GG        ++  +   A A+SR     G + A    + SR G         
Sbjct: 439 GGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKN 498

Query: 56  MAGRGTETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPR 101
           +  RG +   A EK     A+  GR+    Q+P  + A  R+G  +
Sbjct: 499 LWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSK 544


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 13/54 (24%)

Query: 37  SSPAGTRLAGKFVSSSRNGMAGRGTETALAEEKLGVP------KARGPGRRGEA 84
           S+P   RLA         G    G E AL  EK GVP      K RGPG+ GE+
Sbjct: 658 STPLRDRLAAL-------GKLKTGPEGALGSEKNGVPARPGTEKTRGPGKSGES 704


>gi|169167808 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 12  GGGAAGSWSTESL-PRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRGTETALAEEKL 70
           G   AG+  +  L PR + + +++  S+  G R+       +  G  GRG E+A      
Sbjct: 29  GASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAP--GRTCRGGPGRGYESAAGNSLP 86

Query: 71  GVPKARGPGRRGEAPQQPG 89
            VP   G    G A  QPG
Sbjct: 87  SVPGGGGRDPGGGAASQPG 105


>gi|113417039 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 12  GGGAAGSWSTESL-PRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRGTETALAEEKL 70
           G   AG+  +  L PR + + +++  S+  G R+       +  G  GRG E+A      
Sbjct: 29  GASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAP--GRTCRGGPGRGYESAAGNSLP 86

Query: 71  GVPKARGPGRRGEAPQQPG 89
            VP   G    G A  QPG
Sbjct: 87  SVPGGGGRDPGGGAASQPG 105


>gi|113416520 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 12  GGGAAGSWSTESL-PRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRGTETALAEEKL 70
           G   AG+  +  L PR + + +++  S+  G R+       +  G  GRG E+A      
Sbjct: 29  GASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAP--GRTCRGGPGRGYESAAGNSLP 86

Query: 71  GVPKARGPGRRGEAPQQPG 89
            VP   G    G A  QPG
Sbjct: 87  SVPGGGGRDPGGGAASQPG 105


>gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]
          Length = 1185

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 12/94 (12%)

Query: 5   GDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRGTETA 64
           G  G    GGAAG+   E  P+    AA    S+P G          +  G AG G E  
Sbjct: 119 GGPGAGAAGGAAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASPGLGAGAGAAGCGGE-- 176

Query: 65  LAEEKLGVPKARG----PGRRGEAPQQPGFSLAG 94
                 G+P  RG         E   Q GF L+G
Sbjct: 177 ------GLPFRRGIRLLDSGSVENVLQVGFHLSG 204


>gi|61699226 pulmonary surfactant-associated protein D precursor
           [Homo sapiens]
          Length = 375

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 5   GDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTR-LAGKFVSSSRNGMAGRGTET 63
           G +GK    G AG       P M+ +A     + P G R + G+       G AG    +
Sbjct: 130 GPQGKPGPKGEAGPKGEVGAPGMQGSAGARGLAGPKGERGVPGERGVPGNTGAAG----S 185

Query: 64  ALAEEKLGVPKARG-PGRRGEAPQQPGFSLAGQRLGAPRLAA 104
           A A    G P ARG PG +G+    PG   A    G P +A+
Sbjct: 186 AGAMGPQGSPGARGPPGLKGD-KGIPGDKGAKGESGLPDVAS 226


>gi|169208819 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 20/76 (26%), Positives = 30/76 (39%)

Query: 5   GDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRGTETA 64
           G  G+     AA   +++S P   A AA      P+  RL    ++       G G E  
Sbjct: 175 GPWGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLARFARAAGGHGGEAG 234

Query: 65  LAEEKLGVPKARGPGR 80
            A +  G  +A+G  R
Sbjct: 235 SAGKNSGRHRAQGSER 250


>gi|169208593 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 20/76 (26%), Positives = 30/76 (39%)

Query: 5   GDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRGTETA 64
           G  G+     AA   +++S P   A AA      P+  RL    ++       G G E  
Sbjct: 175 GPWGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLARFARAAGGHGGEAG 234

Query: 65  LAEEKLGVPKARGPGR 80
            A +  G  +A+G  R
Sbjct: 235 SAGKNSGRHRAQGSER 250


>gi|169208169 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 20/76 (26%), Positives = 30/76 (39%)

Query: 5   GDKGKTCGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRGTETA 64
           G  G+     AA   +++S P   A AA      P+  RL    ++       G G E  
Sbjct: 175 GPWGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLARFARAAGGHGGEAG 234

Query: 65  LAEEKLGVPKARGPGR 80
            A +  G  +A+G  R
Sbjct: 235 SAGKNSGRHRAQGSER 250


>gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
          Length = 993

 Score = 29.3 bits (64), Expect = 0.69
 Identities = 18/58 (31%), Positives = 24/58 (41%)

Query: 34  SRFSSPAGTRLAGKFVSSSRNGMAGRGTETALAEEKLGVPKARGPGRRGEAPQQPGFS 91
           S+ SS A T+  G   S+        G + A A  + G  K  G     EAP QP  +
Sbjct: 656 SQGSSHAATKPQGPATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQPSLN 713


>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 465

 Score = 29.3 bits (64), Expect = 0.69
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 11/96 (11%)

Query: 4   EGDKGKTCGGGA---AGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAGRG 60
           E   GKTCGGG     G    + L +       SR+         GK     +   AG  
Sbjct: 263 EAAAGKTCGGGGEKHRGGGDKKPLRK------NSRWRGQKAAAAGGK--KPQKAAAAGGE 314

Query: 61  TETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQR 96
               L  +K  V +A+ P +     Q  G  + GQR
Sbjct: 315 RRKKLRRQKAAVARAKSPKKPRWRGQNSGNGVEGQR 350


>gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
          Length = 264

 Score = 29.3 bits (64), Expect = 0.69
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 75  ARGPGRRGEAPQQPGFSLAGQRLGAPR 101
           A+ PGRRGE    PG  L  ++ GAP+
Sbjct: 8   AQQPGRRGEGLSSPGGWLEAEKKGAPQ 34


>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 330

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 38  SPAGTRLAGKFVSSSRNGMAGRGTETALAEEKLGV-----PKARG---PGRRGEAPQQPG 89
           SP G+R      S  R+G  G G   AL +E         P ARG   PGR   AP    
Sbjct: 135 SPRGSRQERGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARP 194

Query: 90  FSLAGQRLGAPRLAA 104
            +  G+R G  R A+
Sbjct: 195 STQPGRRPGLGRAAS 209


>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 330

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 38  SPAGTRLAGKFVSSSRNGMAGRGTETALAEEKLGV-----PKARG---PGRRGEAPQQPG 89
           SP G+R      S  R+G  G G   AL +E         P ARG   PGR   AP    
Sbjct: 135 SPRGSRQERGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARP 194

Query: 90  FSLAGQRLGAPRLAA 104
            +  G+R G  R A+
Sbjct: 195 STQPGRRPGLGRAAS 209


>gi|239508745 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 249

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 39  PAGTRLAGKFVSSSRNGMAGRGTETALAEEKLGVPKARGPGRRGEAPQQPG 89
           PAG+  A +F ++S    AGR  E A A    G   A GP    EAPQ  G
Sbjct: 132 PAGSLPAAQFAAASGAARAGRRRERACAGRSAG--DAAGP----EAPQPTG 176


>gi|35493853 otoferlin isoform c [Homo sapiens]
          Length = 1307

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 19  WSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAG--RGTETALA--EEKLGVPK 74
           W ++    ++    Q R   P+G  L  K    +  G+ G  +G E A A  EEK    +
Sbjct: 638 WWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQ 697

Query: 75  ARGPGRRGEAPQQ 87
           + G G+  EAP++
Sbjct: 698 SSGSGQGSEAPEK 710


>gi|35493868 otoferlin isoform b [Homo sapiens]
          Length = 1230

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 19  WSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAG--RGTETALA--EEKLGVPK 74
           W ++    ++    Q R   P+G  L  K    +  G+ G  +G E A A  EEK    +
Sbjct: 561 WWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQ 620

Query: 75  ARGPGRRGEAPQQ 87
           + G G+  EAP++
Sbjct: 621 SSGSGQGSEAPEK 633


>gi|35493860 otoferlin isoform d [Homo sapiens]
          Length = 1230

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 19  WSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAG--RGTETALA--EEKLGVPK 74
           W ++    ++    Q R   P+G  L  K    +  G+ G  +G E A A  EEK    +
Sbjct: 561 WWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQ 620

Query: 75  ARGPGRRGEAPQQ 87
           + G G+  EAP++
Sbjct: 621 SSGSGQGSEAPEK 633


>gi|34740331 otoferlin isoform a [Homo sapiens]
          Length = 1997

 Score = 28.9 bits (63), Expect = 0.91
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 19   WSTESLPRMEAAAAQSRFSSPAGTRLAGKFVSSSRNGMAG--RGTETALA--EEKLGVPK 74
            W ++    ++    Q R   P+G  L  K    +  G+ G  +G E A A  EEK    +
Sbjct: 1328 WWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQ 1387

Query: 75   ARGPGRRGEAPQQ 87
            + G G+  EAP++
Sbjct: 1388 SSGSGQGSEAPEK 1400


>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
          Length = 288

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 19/111 (17%)

Query: 1   MTGEGDKGKTCGG-GAAGSWSTESLPRMEAAAAQS---RFSSPAGTRLAGKFV----SSS 52
           ++G G +G  C G   A +W   +LPR       S   R  +    R  G+      S S
Sbjct: 21  ISGRGARG--CNGIPGAAAWEA-ALPRRRPRRHPSVNPRSRAAGSPRTRGRRTEERPSGS 77

Query: 53  RNGMAGRGTETALAEEKLGVPKARGPGRRGEAPQQPGFSLAGQRLGAPRLA 103
           R G  GRG   AL   +LG    RG   RG AP++ G    G+   APR A
Sbjct: 78  RLGDRGRGR--ALPGGRLG---GRG---RGRAPERVGGRGRGRGTAAPRAA 120


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 28.1 bits (61), Expect = 1.5
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 11/82 (13%)

Query: 14  GAAGSWSTESLPRMEAA---------AAQSRFSSPAGT--RLAGKFVSSSRNGMAGRGTE 62
           G +GS  T  +P   AA          A  + +S  G   +  GK V+ SRNG  G+G +
Sbjct: 240 GTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPKGGGKGVTRSRNGGKGKGKK 299

Query: 63  TALAEEKLGVPKARGPGRRGEA 84
           + +  ++LG+    G G    A
Sbjct: 300 SKVEVDELGMGFRPGDGAAAAA 321


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 28.1 bits (61), Expect = 1.5
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 11/82 (13%)

Query: 14  GAAGSWSTESLPRMEAA---------AAQSRFSSPAGT--RLAGKFVSSSRNGMAGRGTE 62
           G +GS  T  +P   AA          A  + +S  G   +  GK V+ SRNG  G+G +
Sbjct: 240 GTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPKGGGKGVTRSRNGGKGKGKK 299

Query: 63  TALAEEKLGVPKARGPGRRGEA 84
           + +  ++LG+    G G    A
Sbjct: 300 SKVEVDELGMGFRPGDGAAAAA 321


>gi|41393599 coproporphyrinogen oxidase [Homo sapiens]
          Length = 454

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 8/59 (13%)

Query: 11 CGGGAAGSWSTESLPRMEAAAAQSRFSSPAGTRLAGKF--VSSSRNG-MAGRGTETALA 66
          CGGG   +WS  S     AA    R   PAGT  +      S+SR G   G G   ALA
Sbjct: 30 CGGGGLRAWSQRS-----AAGRVCRPPGPAGTEQSRGLGHGSTSRGGPWVGTGLAAALA 83


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.128    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,748,269
Number of Sequences: 37866
Number of extensions: 227738
Number of successful extensions: 962
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 895
Number of HSP's gapped (non-prelim): 125
length of query: 104
length of database: 18,247,518
effective HSP length: 75
effective length of query: 29
effective length of database: 15,407,568
effective search space: 446819472
effective search space used: 446819472
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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