OTOF 26479

Name: OTOF	Sequence: fasta or formatted (1997aa)		NCBI GI: 34740331
Description: otoferlin isoform a		Referenced in: Auditory and Vestibular Functions Additional Membrane Functions
Other entries for this name: alt prot [1307aa] otoferlin isoform c alt prot [1230aa] otoferlin isoform d alt prot [1230aa] otoferlin isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 110 2 C cysteine 1.4 28 2 D aspartate 7.4 148 3 E glutamate 8.2 163 4 F phenylalanine 4.3 85 2 G glycine 6.5 129 2 H histidine 1.9 37 2 I isoleucine 4.5 89 2 K lysine 7.1 142 6 L leucine 9.7 193 11 M methionine 2.4 47 2 N asparagine 3.8 75 2 P proline 6.0 120 2 Q glutamine 3.3 65 2 R arginine 6.1 122 3 S serine 6.2 124 3 T threonine 4.5 89 2 V valine 7.1 142 3 W tryptophan 1.6 32 2 Y tyrosine 2.9 57 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 otoferlin isoform a OTOF 0.632 otoferlin isoform c OTOF 0.614 otoferlin isoform b OTOF 0.606 otoferlin isoform d FER1L6 0.441 fer-1-like 6 DYSF 0.173 dysferlin isoform 1 DYSF 0.173 dysferlin isoform 5 DYSF 0.173 dysferlin isoform 6 DYSF 0.173 dysferlin isoform 14 DYSF 0.173 dysferlin isoform 11 DYSF 0.173 dysferlin isoform 10 DYSF 0.170 dysferlin isoform 2 DYSF 0.170 dysferlin isoform 8 DYSF 0.170 dysferlin isoform 3 DYSF 0.170 dysferlin isoform 4 DYSF 0.170 dysferlin isoform 7 DYSF 0.170 dysferlin isoform 13 DYSF 0.170 dysferlin isoform 12 DYSF 0.170 dysferlin isoform 9 MYOF 0.163 myoferlin isoform b MYOF 0.163 myoferlin isoform a FER1L5 0.100 fer-1-like 5 isoform 1 FER1L5 0.098 fer-1-like 5 isoform 2 RASAL1 0.010 RAS protein activator like 1 LOC100132214 0.007 PREDICTED: similar to calcium-promoted Ras inactiva... LOC100132214 0.007 PREDICTED: similar to calcium-promoted Ras inactiva... LOC100132214 0.007 PREDICTED: similar to calcium-promoted Ras inactiva... LOC100132214 0.007 PREDICTED: similar to calcium-promoted Ras inactiva... RASA4 0.007 RAS p21 protein activator 4 isoform 2 RASA4 0.007 RAS p21 protein activator 4 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.