Guide to the Human Genome
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Search of human proteins with 169215637

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]
         (318 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169216044 PREDICTED: similar to hCG2041320 [Homo sapiens]          652   0.0  
gi|169215838 PREDICTED: similar to hCG2041320 [Homo sapiens]          652   0.0  
gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]          652   0.0  
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ...   240   1e-63
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ...   240   1e-63
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ...   240   1e-63
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ...   240   1e-63
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s...   240   1e-63
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso...   234   8e-62
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof...   234   8e-62
gi|47132519 Ras association and pleckstrin homology domains 1 is...    38   0.010
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]               37   0.018
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]        37   0.030
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]        37   0.030
gi|126352608 elastin isoform e precursor [Homo sapiens]                36   0.040
gi|126352700 elastin isoform b precursor [Homo sapiens]                36   0.040
gi|126352440 elastin isoform a precursor [Homo sapiens]                36   0.040
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       36   0.052
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      35   0.067
gi|121114296 caudal type homeobox 1 [Homo sapiens]                     35   0.067
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s...    35   0.088
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ...    35   0.088
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ...    35   0.088
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s...    35   0.088
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    35   0.11 
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    35   0.11 
gi|38569466 ROD1 regulator of differentiation 1 [Homo sapiens]         35   0.11 
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]      34   0.15 
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                34   0.15 
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                34   0.15 

>gi|169216044 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score =  652 bits (1682), Expect = 0.0
 Identities = 318/318 (100%), Positives = 318/318 (100%)

Query: 1   MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK 60
           MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK
Sbjct: 1   MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK 60

Query: 61  PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA 120
           PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA
Sbjct: 61  PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA 120

Query: 121 LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD 180
           LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD
Sbjct: 121 LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD 180

Query: 181 KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV 240
           KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV
Sbjct: 181 KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV 240

Query: 241 PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS 300
           PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS
Sbjct: 241 PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS 300

Query: 301 THQDRGLHPHLLAEQPHL 318
           THQDRGLHPHLLAEQPHL
Sbjct: 301 THQDRGLHPHLLAEQPHL 318


>gi|169215838 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score =  652 bits (1682), Expect = 0.0
 Identities = 318/318 (100%), Positives = 318/318 (100%)

Query: 1   MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK 60
           MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK
Sbjct: 1   MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK 60

Query: 61  PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA 120
           PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA
Sbjct: 61  PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA 120

Query: 121 LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD 180
           LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD
Sbjct: 121 LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD 180

Query: 181 KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV 240
           KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV
Sbjct: 181 KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV 240

Query: 241 PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS 300
           PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS
Sbjct: 241 PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS 300

Query: 301 THQDRGLHPHLLAEQPHL 318
           THQDRGLHPHLLAEQPHL
Sbjct: 301 THQDRGLHPHLLAEQPHL 318


>gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score =  652 bits (1682), Expect = 0.0
 Identities = 318/318 (100%), Positives = 318/318 (100%)

Query: 1   MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK 60
           MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK
Sbjct: 1   MGISAHASKGELVGALLFRKASVSPICIHGTQNHNASSSSFRGQTRPVLLSLGPWAQMFK 60

Query: 61  PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA 120
           PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA
Sbjct: 61  PVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA 120

Query: 121 LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD 180
           LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD
Sbjct: 121 LRFRLRAGSGGTLELRQLFKELWQSRLWARVARLQQHIDYRMKCILQEGTIFFGIFKAFD 180

Query: 181 KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV 240
           KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV
Sbjct: 181 KHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARV 240

Query: 241 PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS 300
           PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS
Sbjct: 241 PLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRALLEPQHS 300

Query: 301 THQDRGLHPHLLAEQPHL 318
           THQDRGLHPHLLAEQPHL
Sbjct: 301 THQDRGLHPHLLAEQPHL 318


>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score =  240 bits (612), Expect = 1e-63
 Identities = 118/141 (83%), Positives = 124/141 (87%)

Query: 152 ARLQQHIDYRMKCILQEGTIFFGIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHF 211
           +++ QHIDYRM+CILQ+G IF G FKAFDKH+NLILCDCDEFRKIKPKN KQPE EEK  
Sbjct: 7   SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRV 66

Query: 212 WGLVLLHGENLVSMTVEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGG 271
            GLVLL GENLVSMTVEG PPK TGIARVPLAGAAGGPGV RAAGRGV AGVPIPQAP G
Sbjct: 67  LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAG 126

Query: 272 LAGPVPGVGGPSQQVMTPQRR 292
           LAGPV GVGGPSQQVMTPQ R
Sbjct: 127 LAGPVRGVGGPSQQVMTPQGR 147



 Score = 35.4 bits (80), Expect = 0.067
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGV----SAGVPIPQAPGGLAGPVPGVGGPSQ 284
           G PP   G A  P    A  PG+    G  +    + G PI   P G+  P PG+ GP  
Sbjct: 173 GTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPP 232

Query: 285 QVMTPQR 291
             M P R
Sbjct: 233 PGMRPPR 239


>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score =  240 bits (612), Expect = 1e-63
 Identities = 118/141 (83%), Positives = 124/141 (87%)

Query: 152 ARLQQHIDYRMKCILQEGTIFFGIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHF 211
           +++ QHIDYRM+CILQ+G IF G FKAFDKH+NLILCDCDEFRKIKPKN KQPE EEK  
Sbjct: 7   SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRV 66

Query: 212 WGLVLLHGENLVSMTVEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGG 271
            GLVLL GENLVSMTVEG PPK TGIARVPLAGAAGGPGV RAAGRGV AGVPIPQAP G
Sbjct: 67  LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAG 126

Query: 272 LAGPVPGVGGPSQQVMTPQRR 292
           LAGPV GVGGPSQQVMTPQ R
Sbjct: 127 LAGPVRGVGGPSQQVMTPQGR 147



 Score = 35.4 bits (80), Expect = 0.067
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGV----SAGVPIPQAPGGLAGPVPGVGGPSQ 284
           G PP   G A  P    A  PG+    G  +    + G PI   P G+  P PG+ GP  
Sbjct: 173 GTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPP 232

Query: 285 QVMTPQR 291
             M P R
Sbjct: 233 PGMRPPR 239


>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score =  240 bits (612), Expect = 1e-63
 Identities = 118/141 (83%), Positives = 124/141 (87%)

Query: 152 ARLQQHIDYRMKCILQEGTIFFGIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHF 211
           +++ QHIDYRM+CILQ+G IF G FKAFDKH+NLILCDCDEFRKIKPKN KQPE EEK  
Sbjct: 7   SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRV 66

Query: 212 WGLVLLHGENLVSMTVEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGG 271
            GLVLL GENLVSMTVEG PPK TGIARVPLAGAAGGPGV RAAGRGV AGVPIPQAP G
Sbjct: 67  LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAG 126

Query: 272 LAGPVPGVGGPSQQVMTPQRR 292
           LAGPV GVGGPSQQVMTPQ R
Sbjct: 127 LAGPVRGVGGPSQQVMTPQGR 147



 Score = 35.4 bits (80), Expect = 0.067
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGV----SAGVPIPQAPGGLAGPVPGVGGPSQ 284
           G PP   G A  P    A  PG+    G  +    + G PI   P G+  P PG+ GP  
Sbjct: 173 GTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPP 232

Query: 285 QVMTPQR 291
             M P R
Sbjct: 233 PGMRPPR 239


>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score =  240 bits (612), Expect = 1e-63
 Identities = 118/141 (83%), Positives = 124/141 (87%)

Query: 152 ARLQQHIDYRMKCILQEGTIFFGIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHF 211
           +++ QHIDYRM+CILQ+G IF G FKAFDKH+NLILCDCDEFRKIKPKN KQPE EEK  
Sbjct: 7   SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRV 66

Query: 212 WGLVLLHGENLVSMTVEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGG 271
            GLVLL GENLVSMTVEG PPK TGIARVPLAGAAGGPGV RAAGRGV AGVPIPQAP G
Sbjct: 67  LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAG 126

Query: 272 LAGPVPGVGGPSQQVMTPQRR 292
           LAGPV GVGGPSQQVMTPQ R
Sbjct: 127 LAGPVRGVGGPSQQVMTPQGR 147



 Score = 35.4 bits (80), Expect = 0.067
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGV----SAGVPIPQAPGGLAGPVPGVGGPSQ 284
           G PP   G A  P    A  PG+    G  +    + G PI   P G+  P PG+ GP  
Sbjct: 173 GTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPP 232

Query: 285 QVMTPQR 291
             M P R
Sbjct: 233 PGMRPPR 239


>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score =  240 bits (612), Expect = 1e-63
 Identities = 118/141 (83%), Positives = 124/141 (87%)

Query: 152 ARLQQHIDYRMKCILQEGTIFFGIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHF 211
           +++ QHIDYRM+CILQ+G IF G FKAFDKH+NLILCDCDEFRKIKPKN KQPE EEK  
Sbjct: 7   SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRV 66

Query: 212 WGLVLLHGENLVSMTVEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGG 271
            GLVLL GENLVSMTVEG PPK TGIARVPLAGAAGGPGV RAAGRGV AGVPIPQAP G
Sbjct: 67  LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAG 126

Query: 272 LAGPVPGVGGPSQQVMTPQRR 292
           LAGPV GVGGPSQQVMTPQ R
Sbjct: 127 LAGPVRGVGGPSQQVMTPQGR 147



 Score = 35.4 bits (80), Expect = 0.067
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGV----SAGVPIPQAPGGLAGPVPGVGGPSQ 284
           G PP   G A  P    A  PG+    G  +    + G PI   P G+  P PG+ GP  
Sbjct: 173 GTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPPP 232

Query: 285 QVMTPQR 291
             M P R
Sbjct: 233 PGMRPPR 239


>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
           isoform B' [Homo sapiens]
          Length = 240

 Score =  234 bits (597), Expect = 8e-62
 Identities = 114/141 (80%), Positives = 123/141 (87%)

Query: 152 ARLQQHIDYRMKCILQEGTIFFGIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHF 211
           +++ QHIDYRM+CILQ+G IF G FKAFDKH+NLILCDCDEFRKIKPKN KQ E EEK  
Sbjct: 7   SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRV 66

Query: 212 WGLVLLHGENLVSMTVEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGG 271
            GLVLL GENLVSMTVEG PPK TGIARVPLAGAAGGPG+ RAAGRG+ AGVP+PQAP G
Sbjct: 67  LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAG 126

Query: 272 LAGPVPGVGGPSQQVMTPQRR 292
           LAGPV GVGGPSQQVMTPQ R
Sbjct: 127 LAGPVRGVGGPSQQVMTPQGR 147



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)

Query: 248 GPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQR 291
           GP +    GRG   G+P    P G+  P PG+ GP    M P R
Sbjct: 200 GPPMGIPPGRGTPMGMP----PPGMRPPPPGMRGPPPPGMRPPR 239


>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
           B [Homo sapiens]
          Length = 231

 Score =  234 bits (597), Expect = 8e-62
 Identities = 114/141 (80%), Positives = 123/141 (87%)

Query: 152 ARLQQHIDYRMKCILQEGTIFFGIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHF 211
           +++ QHIDYRM+CILQ+G IF G FKAFDKH+NLILCDCDEFRKIKPKN KQ E EEK  
Sbjct: 7   SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRV 66

Query: 212 WGLVLLHGENLVSMTVEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGG 271
            GLVLL GENLVSMTVEG PPK TGIARVPLAGAAGGPG+ RAAGRG+ AGVP+PQAP G
Sbjct: 67  LGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAG 126

Query: 272 LAGPVPGVGGPSQQVMTPQRR 292
           LAGPV GVGGPSQQVMTPQ R
Sbjct: 127 LAGPVRGVGGPSQQVMTPQGR 147


>gi|47132519 Ras association and pleckstrin homology domains 1
           isoform 1 [Homo sapiens]
          Length = 1250

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 30  GTQNHNASSSSFRGQTRP---VLLSLGPWAQMFKPVCPGKADPGLPPPSLNFGAPAPTPA 86
           GTQ   +S +      RP   ++  L P  ++  P    +  P LPPP      P P P 
Sbjct: 584 GTQLEESSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPP----PPPPPPP 639

Query: 87  PHIPASAQLTPAQSISFSGTSGP 109
           P  P      P+QS   +G++ P
Sbjct: 640 PPPPPPPPPLPSQSAPSAGSAAP 662



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/73 (27%), Positives = 28/73 (38%)

Query: 44  QTRPVLLSLGPWAQMFKPVCPGKADPGLPPPSLNFGAPAPTPAPHIPASAQLTPAQSISF 103
           Q+ P + +   W     PV      P  P  SL F  P P+P P  P     T + +   
Sbjct: 893 QSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDK 952

Query: 104 SGTSGPNRKRLIS 116
           SG+ G    +  S
Sbjct: 953 SGSPGKKTSKTSS 965


>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
          Length = 1714

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 228  EGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
            +GLP    G  R  LAGA G PGV  ++G   S G+  P+   GL G  PG+ G
Sbjct: 1314 QGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQ-PGIQG 1366



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAG-RGVSA-----GVPIPQAPGGLAGPVPGVGGP 282
           GLP +      +   G  G PG +   G +GV       GVP P  P GL G V   G P
Sbjct: 858 GLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPP 917

Query: 283 SQQVMTPQR 291
             Q    QR
Sbjct: 918 GSQGPKGQR 926


>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 17/80 (21%)

Query: 227 VEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVP-IPQAPG--------------G 271
           ++G P K   +  V   G  G PG +   G     GVP +P  PG              G
Sbjct: 433 LQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQG 492

Query: 272 LAGP--VPGVGGPSQQVMTP 289
           L GP  +PG+GGPS  +  P
Sbjct: 493 LQGPPGIPGIGGPSGPIGPP 512



 Score = 35.8 bits (81), Expect = 0.052
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 231 PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAG-----PVPGVGGPSQ 284
           PP   G+  V   G  G PG     G+  + G P PQ P G+ G      +PG+G P Q
Sbjct: 262 PPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQ 320



 Score = 35.4 bits (80), Expect = 0.067
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 231 PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPS 283
           PP + GI +  +AG  G PG   A G     G+P P  P G  GP P V  P+
Sbjct: 526 PPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGP-PAVMPPT 577



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 232 PKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPV--PGVGGP 282
           P   G   +P  G  G PG     G G   GVP    P G  GP+  PG+GGP
Sbjct: 339 PGLPGPPGLPGIGKPGFPGPKGDRGMG---GVPGALGPRGEKGPIGAPGIGGP 388



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%)

Query: 231 PPKYTGIARVPLAGAAGGPGV---------VRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
           P  Y G+ +  + G  G PG          +   G     G+P PQ P G  G +PG+G 
Sbjct: 151 PQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHG-LPGIGK 209

Query: 282 P 282
           P
Sbjct: 210 P 210



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 242 LAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGGP 282
           L G  G PG+   +G     G+P P+   GL GP   PG+G P
Sbjct: 493 LQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKP 535



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 7/74 (9%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP-----VPGVGGPS 283
           G PP   G+  +P  G  G PG +   G     G+  PQ P G  G       PG  G  
Sbjct: 386 GGPPGEPGLPGIP--GPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFL 443

Query: 284 QQVMTPQRRALLEP 297
            +V  P  R L  P
Sbjct: 444 GEVGPPGMRGLPGP 457


>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 17/80 (21%)

Query: 227 VEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVP-IPQAPG--------------G 271
           ++G P K   +  V   G  G PG +   G     GVP +P  PG              G
Sbjct: 433 LQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQG 492

Query: 272 LAGP--VPGVGGPSQQVMTP 289
           L GP  +PG+GGPS  +  P
Sbjct: 493 LQGPPGIPGIGGPSGPIGPP 512



 Score = 35.8 bits (81), Expect = 0.052
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 231 PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAG-----PVPGVGGPSQ 284
           PP   G+  V   G  G PG     G+  + G P PQ P G+ G      +PG+G P Q
Sbjct: 262 PPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQ 320



 Score = 35.4 bits (80), Expect = 0.067
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 231 PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPS 283
           PP + GI +  +AG  G PG   A G     G+P P  P G  GP P V  P+
Sbjct: 526 PPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGP-PAVMPPT 577



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 232 PKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPV--PGVGGP 282
           P   G   +P  G  G PG     G G   GVP    P G  GP+  PG+GGP
Sbjct: 339 PGLPGPPGLPGIGKPGFPGPKGDRGMG---GVPGALGPRGEKGPIGAPGIGGP 388



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%)

Query: 231 PPKYTGIARVPLAGAAGGPGV---------VRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
           P  Y G+ +  + G  G PG          +   G     G+P PQ P G  G +PG+G 
Sbjct: 151 PQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHG-LPGIGK 209

Query: 282 P 282
           P
Sbjct: 210 P 210



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 242 LAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGGP 282
           L G  G PG+   +G     G+P P+   GL GP   PG+G P
Sbjct: 493 LQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKP 535



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 7/74 (9%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP-----VPGVGGPS 283
           G PP   G+  +P  G  G PG +   G     G+  PQ P G  G       PG  G  
Sbjct: 386 GGPPGEPGLPGIP--GPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFL 443

Query: 284 QQVMTPQRRALLEP 297
            +V  P  R L  P
Sbjct: 444 GEVGPPGMRGLPGP 457


>gi|126352608 elastin isoform e precursor [Homo sapiens]
          Length = 705

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 243 AGAAGGPGVVRAAGRGVSAGVPIPQAPGGL-AGPVPGVGGP 282
           AG  G PGV    G GVSAG  +PQ   G+  G VPGVG P
Sbjct: 110 AGLGGVPGV---GGLGVSAGAVVPQPGAGVKPGKVPGVGLP 147



 Score = 32.7 bits (73), Expect = 0.44
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 233 KYTGIARVPLAGAAGGPGVVRAAGRGV------SAGVPIPQAPGGLAGPVPGVGGP 282
           KY   A +   G   GPGVV   G GV       AG+P+    G     VPGV  P
Sbjct: 315 KYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSP 370



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 11/56 (19%)

Query: 229 GLPPKYTGIARVPLAGAAGG----PGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVG 280
           GL P   G+   P  G A G    PGV  A G GV+ GV +  APG   G  PG+G
Sbjct: 453 GLVP---GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV--APG--VGVAPGIG 501



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 9/63 (14%)

Query: 227 VEGLPPKYTGIARVPLAG----AAGGPGVVRAAGRGVSAGVPIPQAPG---GLAGPVPGV 279
           V G+P    GI  +   G    AA      +AA  G +AG+ +P  PG   G+ G VPG 
Sbjct: 282 VPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL-VPGGPGFGPGVVG-VPGA 339

Query: 280 GGP 282
           G P
Sbjct: 340 GVP 342



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 9/50 (18%)

Query: 240 VPLAGAAGGPGVVRAAGRGVSA---------GVPIPQAPGGLAGPVPGVG 280
           VP A   G PG V   G G+ A         G P+   PGGLAG   G G
Sbjct: 29  VPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAG 78



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPG-GLA---GPVPGVG 280
           G+ P+    A    A     PGV  A G GV+ GV +  APG GLA   G  PGVG
Sbjct: 436 GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV--APGVGLAPGVGVAPGVG 489


>gi|126352700 elastin isoform b precursor [Homo sapiens]
          Length = 677

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 243 AGAAGGPGVVRAAGRGVSAGVPIPQAPGGL-AGPVPGVGGP 282
           AG  G PGV    G GVSAG  +PQ   G+  G VPGVG P
Sbjct: 100 AGLGGVPGV---GGLGVSAGAVVPQPGAGVKPGKVPGVGLP 137



 Score = 32.7 bits (73), Expect = 0.44
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 233 KYTGIARVPLAGAAGGPGVVRAAGRGV------SAGVPIPQAPGGLAGPVPGVGGP 282
           KY   A +   G   GPGVV   G GV       AG+P+    G     VPGV  P
Sbjct: 305 KYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSP 360



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 11/56 (19%)

Query: 229 GLPPKYTGIARVPLAGAAGG----PGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVG 280
           GL P   G+   P  G A G    PGV  A G GV+ GV +  APG   G  PG+G
Sbjct: 443 GLVP---GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV--APG--VGVAPGIG 491



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 9/63 (14%)

Query: 227 VEGLPPKYTGIARVPLAG----AAGGPGVVRAAGRGVSAGVPIPQAPG---GLAGPVPGV 279
           V G+P    GI  +   G    AA      +AA  G +AG+ +P  PG   G+ G VPG 
Sbjct: 272 VPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL-VPGGPGFGPGVVG-VPGA 329

Query: 280 GGP 282
           G P
Sbjct: 330 GVP 332



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPG-GLA---GPVPGVG 280
           G+ P+    A    A     PGV  A G GV+ GV +  APG GLA   G  PGVG
Sbjct: 426 GISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGV--APGVGLAPGVGVAPGVG 479


>gi|126352440 elastin isoform a precursor [Homo sapiens]
          Length = 724

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 243 AGAAGGPGVVRAAGRGVSAGVPIPQAPGGL-AGPVPGVGGP 282
           AG  G PGV    G GVSAG  +PQ   G+  G VPGVG P
Sbjct: 110 AGLGGVPGV---GGLGVSAGAVVPQPGAGVKPGKVPGVGLP 147



 Score = 32.7 bits (73), Expect = 0.44
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 233 KYTGIARVPLAGAAGGPGVVRAAGRGV------SAGVPIPQAPGGLAGPVPGVGGP 282
           KY   A +   G   GPGVV   G GV       AG+P+    G     VPGV  P
Sbjct: 315 KYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSP 370



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 11/56 (19%)

Query: 229 GLPPKYTGIARVPLAGAAGG----PGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVG 280
           GL P   G+   P  G A G    PGV  A G GV+ GV +  APG   G  PG+G
Sbjct: 472 GLVP---GVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGV--APG--VGVAPGIG 520



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 9/63 (14%)

Query: 227 VEGLPPKYTGIARVPLAG----AAGGPGVVRAAGRGVSAGVPIPQAPG---GLAGPVPGV 279
           V G+P    GI  +   G    AA      +AA  G +AG+ +P  PG   G+ G VPG 
Sbjct: 282 VPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGL-VPGGPGFGPGVVG-VPGA 339

Query: 280 GGP 282
           G P
Sbjct: 340 GVP 342



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 9/50 (18%)

Query: 240 VPLAGAAGGPGVVRAAGRGVSA---------GVPIPQAPGGLAGPVPGVG 280
           VP A   G PG V   G G+ A         G P+   PGGLAG   G G
Sbjct: 29  VPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAG 78


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 227  VEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPV--PGVGGPSQ 284
            + G+P +        L G AG PG V   G     G P P  P G  GPV  PG  GP+ 
Sbjct: 994  IVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAG 1053

Query: 285  QVMTPQR 291
               TP R
Sbjct: 1054 NDGTPGR 1060



 Score = 32.0 bits (71), Expect = 0.75
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
           GL P  TGI   P  G AG PG     G     G P P+ P G+ G  PGV G
Sbjct: 119 GLVPVVTGIRGRP--GPAGPPGSQGPRGERGPKGRPGPRGPQGIDGE-PGVPG 168



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 227 VEGLPPKYTGIARVPLA----GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           ++G+P +  GIA  P      G  G  G    AG   + G+P P  P G AGP    G P
Sbjct: 760 LQGMPGE-RGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEP 818



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 244  GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTP 289
            G  G PG     G   SAG+P P  P G  GPV    GPS +   P
Sbjct: 1149 GLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPV----GPSGKEGNP 1190


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 231 PPKYTGIARVPLA----GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           PP   G A  P A    GA G PG   A G    AG P P  P G  GP+  VG P
Sbjct: 807 PPGPAGFAGPPGADGQPGAKGEPGDAGAKG---DAGPPGPAGPAGPPGPIGNVGAP 859



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 235  TGIARVPLA-GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTPQRRA 293
            TG A  P A GA G PG V  AG+    G   P  P G  GPV G  GP+     PQ   
Sbjct: 1039 TGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPV-GARGPA----GPQGPR 1093

Query: 294  LLEPQHSTHQDRGLHPH 310
              + +     DRG+  H
Sbjct: 1094 GDKGETGEQGDRGIKGH 1110



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 227  VEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
            V GLP +        L G +G PG    +G     G P P  P GLAGP PG  G
Sbjct: 960  VVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGP-PGESG 1013



 Score = 32.7 bits (73), Expect = 0.44
 Identities = 17/39 (43%), Positives = 19/39 (48%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           GA G PG+  A G   + G   PQ PGG  GP    G P
Sbjct: 398 GANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEP 436



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQ 284
           G+ G PG+    G   +AG+P P+   G AGP    G P +
Sbjct: 719 GSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGK 759



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 231 PPKYTGIARVPLA-GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPS 283
           PP   G    P A GA G  G   A G   +AG   P  P G AGP PG  GP+
Sbjct: 849 PPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGP-PGPPGPA 901



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPS 283
           G  G PG V  AG+   AG   P  P G AG   G  GP+
Sbjct: 599 GVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGE-RGEQGPA 637



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 243 AGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
           +G +G  G   A G     G P P  P G AGP PG  G
Sbjct: 784 SGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGP-PGADG 821



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQVMTP 289
           G  G  G    AGR    G P P  P G  G  PG  GP+    TP
Sbjct: 905 GGKGPRGETGPAGRPGEVGPPGPPGPAGEKGS-PGADGPAGAPGTP 949


>gi|121114296 caudal type homeobox 1 [Homo sapiens]
          Length = 265

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 64  PGKADPGLPPPSLNFGAP---APTPAPHIPASAQLTPAQSISFSGTSGPNRKRLISMAEA 120
           PG A P   P SL FG P   +P PAP  P    L  AQ +   GT      +  +  E 
Sbjct: 78  PGPAAPAASPASLAFGPPPDFSPVPAPPGPGPGLL--AQPLGGPGTPSSPGAQRPTPYEW 135

Query: 121 LRFRLRAGSGG 131
           +R  + AG GG
Sbjct: 136 MRRSVAAGGGG 146


>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 11/61 (18%)

Query: 55  WAQMFKPVCPGKADPGLPPPSLNFGAPAPTPAPHIPAS------AQLTPAQSISFSGTSG 108
           W +M +P  P       P P     AP PTP P  P S      AQ T  Q  S   TSG
Sbjct: 572 WTRMARPAAPALTSVPAPAP-----APTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG 626

Query: 109 P 109
           P
Sbjct: 627 P 627


>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 11/61 (18%)

Query: 55  WAQMFKPVCPGKADPGLPPPSLNFGAPAPTPAPHIPAS------AQLTPAQSISFSGTSG 108
           W +M +P  P       P P     AP PTP P  P S      AQ T  Q  S   TSG
Sbjct: 572 WTRMARPAAPALTSVPAPAP-----APTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG 626

Query: 109 P 109
           P
Sbjct: 627 P 627


>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 11/61 (18%)

Query: 55  WAQMFKPVCPGKADPGLPPPSLNFGAPAPTPAPHIPAS------AQLTPAQSISFSGTSG 108
           W +M +P  P       P P     AP PTP P  P S      AQ T  Q  S   TSG
Sbjct: 572 WTRMARPAAPALTSVPAPAP-----APTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG 626

Query: 109 P 109
           P
Sbjct: 627 P 627


>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 11/61 (18%)

Query: 55  WAQMFKPVCPGKADPGLPPPSLNFGAPAPTPAPHIPAS------AQLTPAQSISFSGTSG 108
           W +M +P  P       P P     AP PTP P  P S      AQ T  Q  S   TSG
Sbjct: 433 WTRMARPAAPALTSVPAPAP-----APTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSG 487

Query: 109 P 109
           P
Sbjct: 488 P 488


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 231 PPKYTGIARVPLA-GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGGP 282
           PP   G A  P A G  G  G    AG+   AG P PQ P G  GP    GV GP
Sbjct: 829 PPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGP 883



 Score = 32.0 bits (71), Expect = 0.75
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 8/64 (12%)

Query: 227  VEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPV--------PG 278
            + GLP +        L G +G PG   A G     G P P  P GL GP         PG
Sbjct: 982  IVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPG 1041

Query: 279  VGGP 282
              GP
Sbjct: 1042 ADGP 1045



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGG 281
           GAAG PG    AG     G P P    GL GP   PG GG
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGG 678



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/39 (41%), Positives = 18/39 (46%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           G+AG PG+  A G     G P PQ   G  GP    G P
Sbjct: 420 GSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEP 458



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 231  PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
            PP  TG A  P  G  G PG     GR  +AGV   +   G  G  PG  GP
Sbjct: 1024 PPGLTGPAGEP--GREGSPGADGPPGRDGAAGVKGDRGETGAVG-APGAPGP 1072



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 17/41 (41%), Positives = 18/41 (43%)

Query: 242 LAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           L G  G  G   AAG   + G P P  P G  GP  G G P
Sbjct: 328 LPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFP 368



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP-----VPGVGGPS 283
           G AGGPG   A G    AG    + P G  GP      PG  GP+
Sbjct: 360 GPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPA 404



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/44 (40%), Positives = 20/44 (45%)

Query: 242 LAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQ 285
           L G AG PG     G    +G   P  P GLAG    VG P Q+
Sbjct: 946 LQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQR 989


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 231 PPKYTGIARVPLA-GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGGP 282
           PP   G A  P A G  G  G    AG+   AG P PQ P G  GP    GV GP
Sbjct: 760 PPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGP 814



 Score = 32.0 bits (71), Expect = 0.75
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 8/64 (12%)

Query: 227 VEGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPV--------PG 278
           + GLP +        L G +G PG   A G     G P P  P GL GP         PG
Sbjct: 913 IVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPG 972

Query: 279 VGGP 282
             GP
Sbjct: 973 ADGP 976



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGG 281
           GAAG PG    AG     G P P    GL GP   PG GG
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGG 609



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 16/39 (41%), Positives = 18/39 (46%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           G+AG PG+  A G     G P PQ   G  GP    G P
Sbjct: 351 GSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEP 389



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 231  PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
            PP  TG A  P  G  G PG     GR  +AGV   +   G  G  PG  GP
Sbjct: 955  PPGLTGPAGEP--GREGSPGADGPPGRDGAAGVKGDRGETGAVG-APGAPGP 1003



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 17/41 (41%), Positives = 18/41 (43%)

Query: 242 LAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           L G  G  G   AAG   + G P P  P G  GP  G G P
Sbjct: 259 LPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFP 299



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP-----VPGVGGPS 283
           G AGGPG   A G    AG    + P G  GP      PG  GP+
Sbjct: 291 GPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPA 335



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/44 (40%), Positives = 20/44 (45%)

Query: 242 LAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQ 285
           L G AG PG     G    +G   P  P GLAG    VG P Q+
Sbjct: 877 LQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQR 920


>gi|38569466 ROD1 regulator of differentiation 1 [Homo sapiens]
          Length = 552

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 16/94 (17%)

Query: 192 EFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPKYTGIARVPLAGAAGGPGV 251
           +F K+   NVK    + + F  L L  G+   S+               P+A A G PG+
Sbjct: 254 DFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-------------EPPMAAAFGAPGI 300

Query: 252 VR---AAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           +    A   G +  +  PQA G     VPG  GP
Sbjct: 301 ISSPYAGAAGFAPAIGFPQATGLSVPAVPGALGP 334


>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
          Length = 1073

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 9/51 (17%)

Query: 231 PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
           PP   GIA     GAAG PG+  + G+    G P PQ P GL G +PG  G
Sbjct: 649 PPGADGIA-----GAAGPPGIQGSPGK---EGPPGPQGPSGLPG-IPGEEG 690



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 231 PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           PP   G+  +P  G  G  GV    GR  + G      P GL GP PG+ GP
Sbjct: 565 PPGPPGLPGLP--GFKGDKGVPGKPGREGTEGKKGEAGPPGLPGP-PGIAGP 613



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 9/59 (15%)

Query: 244 GAAGGPGVVRAAGRGVSAGVP-IPQAPG-------GLAGPVPGVGGPSQQVMTPQRRAL 294
           G  G PG+    G     G P IP +PG       G+AGP PG  GP     +P  R L
Sbjct: 472 GLRGSPGLPGPLGTKGDRGAPGIPGSPGSRGDPGIGVAGP-PGPSGPPGDKGSPGSRGL 529


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 231 PPKYTGIARVP-LAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGGPS 283
           PP  TG    P   G  GGPGV  A G+    G+P      GL GP  +PG+ GP+
Sbjct: 419 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLP---GQPGLRGPSGIPGLQGPA 471



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 229 GLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVP---IPQAPGGLAGPVPGVGG 281
           G PP   G A +P  G  G PG    AG G   GVP     Q P GLAG  PGV G
Sbjct: 357 GGPPGLPGSAGLP--GRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGK-PGVPG 409



 Score = 32.7 bits (73), Expect = 0.44
 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 228 EGLPPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
           E  PP   G    P A    GP  V   G   +AG+P PQ P G  G  PG  GP
Sbjct: 253 ESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE-PGTRGP 306



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPG--GLAGPVPGVGGP 282
           GA G PG+   AG G      +P APG  G +GP PGV GP
Sbjct: 223 GAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGP-PGVPGP 262



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 236 GIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGGPS 283
           G +R+  AG  G PG V   G+    G P  +   GL GP   PG+ GPS
Sbjct: 118 GFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPS 167



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 7/51 (13%)

Query: 236 GIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP----VPGVGGP 282
           G+  V + GAAG PG    +G   + G P  + P GL GP    +PG+ GP
Sbjct: 276 GVDGVGVPGAAGLPGPQGPSG---AKGEPGTRGPPGLIGPTGYGMPGLPGP 323



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 231 PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGG 281
           PP   G A +   G  G PG     G     GVP P+   G  GP   PGV G
Sbjct: 227 PPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG 279



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
           G AG PG++   G     G P  Q P GL GP PG+ G
Sbjct: 328 GPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGP-PGLPG 364



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGP--VPGVGG 281
           G  G PG+  +AG     G P P+   G  GP  VPG+ G
Sbjct: 355 GLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRG 394


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 9/51 (17%)

Query: 231  PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGG 281
            PP   GIA     GAAG PG+  + G+    G P PQ P GL G +PG  G
Sbjct: 1202 PPGADGIA-----GAAGPPGIQGSPGK---EGPPGPQGPSGLPG-IPGEEG 1243



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 244 GAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGPSQQ 285
           G  G PG +   G     G+  PQ P GL GP   VG P  Q
Sbjct: 548 GMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQ 589



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 231 PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVP----IPQAPG--GLAGPVPGVGGPS 283
           PP   G+  + L G  G PGV    G G S G+P     P  PG  G  GP PG  GP+
Sbjct: 703 PPGIPGL--LGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGP-PGKDGPN 758



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 231  PPKYTGIARVPLAGAAGGPGVVRAAGRGVSAGVPIPQAPGGLAGPVPGVGGP 282
            PP   G+  +P  G  G  GV    GR  + G      P GL GP PG+ GP
Sbjct: 1118 PPGPPGLPGLP--GFKGDKGVPGKPGREGTEGKKGEAGPPGLPGP-PGIAGP 1166


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,976,423
Number of Sequences: 37866
Number of extensions: 900204
Number of successful extensions: 8751
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 220
Number of HSP's that attempted gapping in prelim test: 6419
Number of HSP's gapped (non-prelim): 2513
length of query: 318
length of database: 18,247,518
effective HSP length: 102
effective length of query: 216
effective length of database: 14,385,186
effective search space: 3107200176
effective search space used: 3107200176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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