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Search of human proteins with 169211552
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211552 PREDICTED: hypothetical protein [Homo sapiens]
(211 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211552 PREDICTED: hypothetical protein [Homo sapiens] 461 e-130
gi|113427091 PREDICTED: hypothetical protein [Homo sapiens] 458 e-129
gi|124430557 a disintegrin-like and metalloprotease with thrombo... 33 0.14
gi|239755001 PREDICTED: hypothetical protein [Homo sapiens] 33 0.23
gi|239749563 PREDICTED: hypothetical protein XP_002347087 [Homo ... 33 0.23
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 33 0.23
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ... 32 0.30
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ... 32 0.39
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ... 32 0.51
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ... 32 0.51
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 30 1.5
gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo ... 30 1.5
gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo sap... 30 1.5
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 30 1.5
gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo s... 30 1.5
gi|40254982 hypothetical protein LOC83641 [Homo sapiens] 30 2.0
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 29 2.6
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 29 2.6
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 29 2.6
gi|13128992 hypothetical protein MGC2803 [Homo sapiens] 29 2.6
gi|210147453 nuclear localized factor 3 [Homo sapiens] 29 2.6
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 29 3.3
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 29 3.3
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 29 3.3
gi|222831614 hypothetical protein LOC388963 [Homo sapiens] 28 4.4
gi|222831660 family with sequence similarity 171, member A2 [Hom... 28 4.4
gi|239753576 PREDICTED: hypothetical protein [Homo sapiens] 28 4.4
gi|239748084 PREDICTED: hypothetical protein [Homo sapiens] 28 4.4
gi|239741982 PREDICTED: hypothetical protein [Homo sapiens] 28 4.4
gi|38683827 ADAM metallopeptidase with thrombospondin type 1 mot... 28 4.4
>gi|169211552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 461 bits (1186), Expect = e-130
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP 60
MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP
Sbjct: 1 MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP 60
Query: 61 RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPR 120
RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPR
Sbjct: 61 RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPR 120
Query: 121 HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL 180
HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL
Sbjct: 121 HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL 180
Query: 181 QERNLEEGILAWQKVVGSAPNCTCSHQALCI 211
QERNLEEGILAWQKVVGSAPNCTCSHQALCI
Sbjct: 181 QERNLEEGILAWQKVVGSAPNCTCSHQALCI 211
>gi|113427091 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 458 bits (1178), Expect = e-129
Identities = 210/211 (99%), Positives = 210/211 (99%)
Query: 1 MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP 60
MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP
Sbjct: 1 MPLLQEPTAGLKAVHMPGFLEHQRQEEGSWGTWSRMPFPRINVGLPEALHLQGATLSHIP 60
Query: 61 RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPR 120
RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGT R
Sbjct: 61 RPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTSR 120
Query: 121 HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL 180
HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL
Sbjct: 121 HPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWCMGRGLWAVGAASGL 180
Query: 181 QERNLEEGILAWQKVVGSAPNCTCSHQALCI 211
QERNLEEGILAWQKVVGSAPNCTCSHQALCI
Sbjct: 181 QERNLEEGILAWQKVVGSAPNCTCSHQALCI 211
>gi|124430557 a disintegrin-like and metalloprotease with
thrombospondin type 1 motifs 20 [Homo sapiens]
Length = 1910
Score = 33.5 bits (75), Expect = 0.14
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 57 SHIPRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVAC 101
+H+PRP+ W F C W G D S S+ G G+ QV C
Sbjct: 1193 AHLPRPAEIWDCFTPCGEWQAG---DWSPCSASCGHGKTTRQVLC 1234
>gi|239755001 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 32.7 bits (73), Expect = 0.23
Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 35/114 (30%)
Query: 60 PRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGR-------GTQPS 112
P P R W F +W GF S+GG G AWG GT P
Sbjct: 144 PAPPRGWPLFLRADIW----GFSSRKQPSLGGAG----------AWGSRARGCVLGTVPI 189
Query: 113 GAEKGTPR-------HPE----LPGMDDMGGTGVRGLQL---GCPMAQPEGNIS 152
G+ +G PR HP P + V+ +QL G P P+G +S
Sbjct: 190 GSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQGTLS 243
>gi|239749563 PREDICTED: hypothetical protein XP_002347087 [Homo
sapiens]
Length = 261
Score = 32.7 bits (73), Expect = 0.23
Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 35/114 (30%)
Query: 60 PRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGR-------GTQPS 112
P P R W F +W GF S+GG G AWG GT P
Sbjct: 144 PAPPRGWPLFLRADIW----GFSSRKQPSLGGAG----------AWGSRARGCVLGTVPI 189
Query: 113 GAEKGTPR-------HPE----LPGMDDMGGTGVRGLQL---GCPMAQPEGNIS 152
G+ +G PR HP P + V+ +QL G P P+G +S
Sbjct: 190 GSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQGTLS 243
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 32.7 bits (73), Expect = 0.23
Identities = 31/99 (31%), Positives = 34/99 (34%), Gaps = 9/99 (9%)
Query: 60 PRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTP 119
PRP A SS G W G GE RGT P E+
Sbjct: 621 PRPFPAQSSAS-------GSFLLSGWDPEGRGAGETLAGDPAEVLGERGTAPWVEEEEEE 673
Query: 120 RHPELPGMDD--MGGTGVRGLQLGCPMAQPEGNISQLPL 156
PG D +GG R L CP+ EG S LPL
Sbjct: 674 EEGSSPGEDSSSLGGGPSRRGPLPCPLCSREGACSCLPL 712
>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
sapiens]
Length = 800
Score = 32.3 bits (72), Expect = 0.30
Identities = 41/148 (27%), Positives = 58/148 (39%), Gaps = 31/148 (20%)
Query: 35 RMPFPRINVGLPEALHLQGATLSHIPRPSRAWSSFPC------CCLWDLGGGFDKSWSSS 88
R+P PR L A H G P P R S+ PC CLW + G + S
Sbjct: 295 RLP-PRSPPRLGRAPHFNGPPAH--PGPGRP-STSPCPLPPSLLCLW-VESGTPRGRQSL 349
Query: 89 VGGEGEIQGQ----VACSPAWGRGTQPSGAEKGTPRHPE-----------LPGMDDMGGT 133
G GQ V +P G + +G E+G+P E PG+ + GGT
Sbjct: 350 AEGVKRDGGQGLPDVEGAPDMGSSGEGAGLEEGSPLRRERAWPPPSLRTPTPGLTEGGGT 409
Query: 134 GV-----RGLQLGCPMAQPEGNISQLPL 156
G+ RG + P+G++ + L
Sbjct: 410 GLPSKQRRGPSPKTELGGPQGSLGRASL 437
>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 32.0 bits (71), Expect = 0.39
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 107 RGTQPSGAEKGTPRHPELPGMDDM-----GGTGVRGLQLGCPMAQPEGNISQLPLVLWHP 161
R QP+G E +HP+ P G G R L P P+G++ + L HP
Sbjct: 125 RTAQPAGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGLCCAHP 184
Query: 162 RR---DWCMGRGLW----------AVGAASG 179
R G G+W AVGAA+G
Sbjct: 185 VRPAGHLACGAGIWTRAQAGPHKRAVGAAAG 215
>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 31.6 bits (70), Expect = 0.51
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 107 RGTQPSGAEKGTPRHPELPGMDDM-----GGTGVRGLQLGCPMAQPEGNISQLPLVLWHP 161
R QP+G E +HP+ P G G R L P P+G++ + L HP
Sbjct: 125 RTAQPAGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGLCCAHP 184
Query: 162 RR---DWCMGRGLW----------AVGAASG 179
R G G+W AVGAA+G
Sbjct: 185 VRPAGHVACGAGIWTRAQAGPHKRAVGAAAG 215
>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 31.6 bits (70), Expect = 0.51
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 107 RGTQPSGAEKGTPRHPELPGMDDM-----GGTGVRGLQLGCPMAQPEGNISQLPLVLWHP 161
R QP+G E +HP+ P G G R L P P+G++ + L HP
Sbjct: 125 RTAQPAGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLSGSSPWRGPQGSLCKSGLCCAHP 184
Query: 162 RR---DWCMGRGLW----------AVGAASG 179
R G G+W AVGAA+G
Sbjct: 185 VRPAGHVACGAGIWTRAQAGPHKRAVGAAAG 215
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 30.0 bits (66), Expect = 1.5
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 15/68 (22%)
Query: 78 GGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPR------HPELPGMDDMG 131
GGG + S + +G V +PA R +P G + P+ P LPG+ G
Sbjct: 128 GGGLEPSPGA--------RGAVGAAPAAARHRKPRGRSRRAPQMPLRVLPPILPGLSRAG 179
Query: 132 G-TGVRGL 138
G TG RGL
Sbjct: 180 GATGGRGL 187
>gi|148536823 type IV alpha 6 collagen isoform A precursor [Homo
sapiens]
Length = 1691
Score = 30.0 bits (66), Expect = 1.5
Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 10/92 (10%)
Query: 107 RGTQPSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWC 166
RG + G P P LPG+ GG G G E + LP HP
Sbjct: 569 RGVIGEPGKDGVPGLPGLPGLPGDGGQGFPG----------EKGLPGLPGEKGHPGPPGL 618
Query: 167 MGRGLWAVGAASGLQERNLEEGILAWQKVVGS 198
G GL + GL ++G+ Q + GS
Sbjct: 619 PGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGS 650
>gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo
sapiens]
Length = 913
Score = 30.0 bits (66), Expect = 1.5
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 12/80 (15%)
Query: 60 PRPSRAWSSFPCCCLW-DLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGT 118
P P+ SS P + D+ GG+D W + GG G A T P+G+ GT
Sbjct: 617 PSPTVHASSTPAVNIQPDVSGGWD--WHAKPGGFGMGSKSAA--------TSPTGSSHGT 666
Query: 119 PRHPELP-GMDDMGGTGVRG 137
P H P +D G G
Sbjct: 667 PTHQSKPQTLDPFADLGTLG 686
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 30.0 bits (66), Expect = 1.5
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 74 LWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPRHPELPGMDDMGGT 133
L +LGG D GG G + + +P G+QPS +P P G
Sbjct: 2118 LKNLGGPGD-------GGAGPREESLPPAPPLANGSQPSQGLTASPADPTRTFAWLPGAP 2170
Query: 134 GVRGLQLGCPMAQPEGNISQLPLV 157
GVR L LG P+ S++ LV
Sbjct: 2171 GVRVLSLGPAPEPPKPATSKIILV 2194
>gi|16357503 type IV alpha 6 collagen isoform B precursor [Homo
sapiens]
Length = 1690
Score = 30.0 bits (66), Expect = 1.5
Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 10/92 (10%)
Query: 107 RGTQPSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLWHPRRDWC 166
RG + G P P LPG+ GG G G E + LP HP
Sbjct: 568 RGVIGEPGKDGVPGLPGLPGLPGDGGQGFPG----------EKGLPGLPGEKGHPGPPGL 617
Query: 167 MGRGLWAVGAASGLQERNLEEGILAWQKVVGS 198
G GL + GL ++G+ Q + GS
Sbjct: 618 PGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGS 649
>gi|40254982 hypothetical protein LOC83641 [Homo sapiens]
Length = 306
Score = 29.6 bits (65), Expect = 2.0
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 8/65 (12%)
Query: 62 PSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPRH 121
PSR+ FPC L G +S S + G + V P G Q PRH
Sbjct: 15 PSRSMHPFPCSALLACFGNTRESASFNQSGVADTHSTVRVQPVAKAGRQ--------PRH 66
Query: 122 PELPG 126
P G
Sbjct: 67 PSAEG 71
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 29.3 bits (64), Expect = 2.6
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 100 ACSPA-WGRGTQPSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLV- 157
AC PA W RG P A +G P P LP G GL C + + EG S P
Sbjct: 665 ACHPAAWSRGPAPPLAFRGAPGAP-LPWPPATGPGSADGL---CTIYETEGPESATPAPG 720
Query: 158 LWHPRRDWCMGRGLWAVGAASGLQERNLEEGIL 190
P G A GA +G R+ ++ L
Sbjct: 721 ALDPGPSPGTSGGKAAAGAGAGASSRSPKQARL 753
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 29.3 bits (64), Expect = 2.6
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 100 ACSPA-WGRGTQPSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLV- 157
AC PA W RG P A +G P P LP G GL C + + EG S P
Sbjct: 934 ACHPAAWSRGPAPPLAFRGAPGAP-LPWPPATGPGSADGL---CTIYETEGPESATPAPG 989
Query: 158 LWHPRRDWCMGRGLWAVGAASGLQERNLEEGIL 190
P G A GA +G R+ ++ L
Sbjct: 990 ALDPGPSPGTSGGKAAAGAGAGASSRSPKQARL 1022
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 29.3 bits (64), Expect = 2.6
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 100 ACSPA-WGRGTQPSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLV- 157
AC PA W RG P A +G P P LP G GL C + + EG S P
Sbjct: 626 ACHPAAWSRGPAPPLAFRGAPGAP-LPWPPATGPGSADGL---CTIYETEGPESATPAPG 681
Query: 158 LWHPRRDWCMGRGLWAVGAASGLQERNLEEGIL 190
P G A GA +G R+ ++ L
Sbjct: 682 ALDPGPSPGTSGGKAAAGAGAGASSRSPKQARL 714
>gi|13128992 hypothetical protein MGC2803 [Homo sapiens]
Length = 176
Score = 29.3 bits (64), Expect = 2.6
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 90 GGEGEIQGQVACSPAWGRGTQPSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEG 149
G E QG+ A PA G G AE G+ PE G +++ G G + G + +G
Sbjct: 5 GRRAEPQGREAPGPAGGGGGGSRWAESGSGTSPE-SGDEEVSGAGSSPVSGGVNLFANDG 63
Query: 150 NISQL 154
+ +L
Sbjct: 64 SFLEL 68
>gi|210147453 nuclear localized factor 3 [Homo sapiens]
Length = 421
Score = 29.3 bits (64), Expect = 2.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 91 GEGEIQGQVACSPAWGRGTQPSGAEKGTPRHPELP 125
G E +GQ A P+ S A + TPR P LP
Sbjct: 59 GPAEGEGQAALGPSTSEQNLASAAPRQTPRSPRLP 93
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 28.9 bits (63), Expect = 3.3
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 11/44 (25%)
Query: 98 QVACSPAWGRGTQPSGAEKG-------TPRHPELPGMDDMGGTG 134
+ A PAW RG P GAE+ +P P P GG+G
Sbjct: 2381 EAAACPAWERGAWPEGAERSSRPDTLLSPEQPVCPA----GGSG 2420
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 28.9 bits (63), Expect = 3.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 92 EGEIQGQVACSPAWGRGTQPSGAEKGTPRHPELPGMDD 129
EGE++G+V G G + G E+G R E G ++
Sbjct: 1018 EGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 1055
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 28.9 bits (63), Expect = 3.3
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Query: 92 EGEIQGQVA-CSPAWGRGTQPSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEG 149
EG + Q A C P WG+ QP E PG GG+ + GC AQP G
Sbjct: 404 EGPPEPQAAGCRPQWGKPAQPK---------LEGPGAPTQGGS--KEAPAGCSDAQPVG 451
>gi|222831614 hypothetical protein LOC388963 [Homo sapiens]
Length = 588
Score = 28.5 bits (62), Expect = 4.4
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 13/86 (15%)
Query: 85 WSSSVGGEGEIQGQVACSPAWGRGTQPSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPM 144
W EGE VA P WG +PS + +P + G+ Q
Sbjct: 105 WRFLARDEGE--SAVAEDPTWGEDEEPSACTTDSWAQGSVPVLHASTSEGLENFQ----- 157
Query: 145 AQPEGNISQLPLVLWHPRRDWCMGRG 170
+ G + ++PL R W MGRG
Sbjct: 158 GEDPGGVDRIPL-----GRSW-MGRG 177
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 28.5 bits (62), Expect = 4.4
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 89 VGGEGEIQGQVACSPAWGRGTQPSGAE---KGTPRHPELPGMDDMGGTGVRG 137
+GGE G V PA GT P A + P+ P++PG GG G G
Sbjct: 549 LGGEAGAAG-VGDEPAPPEGTAPGPARAFPQPDPQRPQMPGHSGPGGEGGGG 599
>gi|239753576 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 28.5 bits (62), Expect = 4.4
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 111 PSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLW-HPRRDWC--M 167
PSGAE T LP GG+G RGL+ P LW H + C
Sbjct: 237 PSGAEAATLAGVRLPPPPGCGGSGARGLR---------------PEQLWSHVQHARCPQP 281
Query: 168 GRGLWAVGAA 177
GRG A GAA
Sbjct: 282 GRGPDASGAA 291
>gi|239748084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 28.5 bits (62), Expect = 4.4
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 111 PSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLW-HPRRDWC--M 167
PSGAE T LP GG+G RGL+ P LW H + C
Sbjct: 237 PSGAEAATLAGVRLPPPPGCGGSGARGLR---------------PEQLWSHVQHARCPQP 281
Query: 168 GRGLWAVGAA 177
GRG A GAA
Sbjct: 282 GRGPDASGAA 291
>gi|239741982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 28.5 bits (62), Expect = 4.4
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 111 PSGAEKGTPRHPELPGMDDMGGTGVRGLQLGCPMAQPEGNISQLPLVLW-HPRRDWC--M 167
PSGAE T LP GG+G RGL+ P LW H + C
Sbjct: 237 PSGAEAATLAGVRLPPPPGCGGSGARGLR---------------PEQLWSHVQHARCPQP 281
Query: 168 GRGLWAVGAA 177
GRG A GAA
Sbjct: 282 GRGPDASGAA 291
>gi|38683827 ADAM metallopeptidase with thrombospondin type 1 motif,
7 preproprotein [Homo sapiens]
Length = 1686
Score = 28.5 bits (62), Expect = 4.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 42 NVGLPEALHLQGATLSHIPRP---SRAWSSFPCCCLWDLGGGFDKSWS--SSVGGEGEIQ 96
+VGL E L+ H+PRP + PC W +G +WS S GEG +
Sbjct: 910 SVGLDEQSALEPPACEHLPRPPTETPCNRHVPCPATWAVG-----NWSQCSVTCGEGTQR 964
Query: 97 GQVACS 102
V C+
Sbjct: 965 RNVLCT 970
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,950,914
Number of Sequences: 37866
Number of extensions: 621125
Number of successful extensions: 1629
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1596
Number of HSP's gapped (non-prelim): 64
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.