FAM148C 12560

Name: FAM148C	Sequence: fasta or formatted (421aa)		NCBI GI: 210147453
Description: nuclear localized factor 3		Referenced in: Additional Host Defense Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 47 3 C cysteine 1.0 4 2 D aspartate 4.0 17 2 E glutamate 6.2 26 2 F phenylalanine 3.1 13 3 G glycine 10.7 45 2 H histidine 2.1 9 1 I isoleucine 1.7 7 1 K lysine 5.0 21 1 L leucine 10.7 45 2 M methionine 1.2 5 1 N asparagine 2.1 9 1 P proline 7.8 33 2 Q glutamine 3.6 15 1 R arginine 8.6 36 3 S serine 11.4 48 2 T threonine 3.6 15 1 V valine 4.5 19 2 W tryptophan 0.5 2 1 Y tyrosine 1.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear localized factor 3 FAM148B 0.176 nuclear localized factor 2 LOC100191040 0.166 hypothetical protein LOC100191040 FAM148A 0.163 nuclear localized factor 1 SYTL1 0.043 synaptotagmin-like 1 RPH3A 0.038 rabphilin 3A homolog isoform 1 RPH3A 0.038 rabphilin 3A homolog isoform 2 SYT16 0.030 synaptotagmin XIV-like ESYT2 0.025 family with sequence similarity 62 (C2 domain contai... DOC2B 0.025 double C2-like domains, beta HRNR 0.021 hornerin DOC2A 0.021 double C2-like domains, alpha DYSF 0.020 dysferlin isoform 8 DYSF 0.020 dysferlin isoform 14 DYSF 0.020 dysferlin isoform 13 DYSF 0.020 dysferlin isoform 12 DYSF 0.020 dysferlin isoform 11 DYSF 0.020 dysferlin isoform 10 DYSF 0.020 dysferlin isoform 9 SYT4 0.020 synaptotagmin IV SYT11 0.020 synaptotagmin XI RASA2 0.019 RAS p21 protein activator 2 COL9A2 0.017 alpha 2 type IX collagen PRR12 0.017 proline rich 12 AGAP2 0.017 centaurin, gamma 1 isoform PIKE-L KIAA0284 0.017 hypothetical protein LOC283638 isoform 2 KIAA0284 0.017 hypothetical protein LOC283638 isoform 1 CHERP 0.017 calcium homeostasis endoplasmic reticulum protein [... SYTL2 0.016 synaptotagmin-like 2 isoform a COL5A1 0.016 alpha 1 type V collagen preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.