Guide to the Human Genome
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Name: LOC100131303 Sequence: fasta or formatted (123aa) NCBI GI: 169209989
Description:

PREDICTED: hypothetical protein LOC100131303

Not currently referenced in the text

Other entries for this name:
alt mRNA {123aa} PREDICTED: hypothetical protein LOC100131303
alt mRNA {123aa} PREDICTED: hypothetical protein LOC100131303
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         13           4
 C cysteine            2.4          3           1
 D aspartate           3.3          4           1
 E glutamate           5.7          7           1
 F phenylalanine       0.0          0           0
 G glycine             9.8         12           2
 H histidine           4.1          5           1
 I isoleucine          3.3          4           1
 K lysine              4.9          6           1
 L leucine             6.5          8           1
 M methionine          1.6          2           1
 N asparagine          0.8          1           1
 P proline             9.8         12           2
 Q glutamine           2.4          3           1
 R arginine            9.8         12           2
 S serine              6.5          8           2
 T threonine           7.3          9           1
 V valine              5.7          7           1
 W tryptophan          1.6          2           1
 Y tyrosine            4.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC100131303 
LOC100131303          1.000   PREDICTED: hypothetical protein LOC100131303 
LOC100131303          1.000   PREDICTED: hypothetical protein LOC100131303 
SAMD1                 0.030   sterile alpha motif domain containing 1 
LOC100133001          0.026   PREDICTED: similar to hCG30082, partial 
OSBP                  0.021   oxysterol binding protein 
WNK1                  0.021   WNK lysine deficient protein kinase 1 
LOC730183             0.021   PREDICTED: hypothetical protein 
SIPA1L3               0.017   signal-induced proliferation-associated 1 like 3 [Ho...
SYN2                  0.013   synapsin II isoform IIa 
C19orf55              0.013   hypothetical protein LOC148137 
RBBP6                 0.013   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.013   retinoblastoma-binding protein 6 isoform 1 
FOXL1                 0.013   forkhead box L1 
TANC2                 0.013   tetratricopeptide repeat, ankyrin repeat and coiled...
PHLDB3                0.013   pleckstrin homology-like domain, family B, member 3...
HCN4                  0.009   hyperpolarization activated cyclic nucleotide-gated p...
AKNA                  0.009   AT-hook transcription factor 
MAPT                  0.009   microtubule-associated protein tau isoform 5 
LOC100293233          0.009   PREDICTED: hypothetical protein 
LOC100291125          0.009   PREDICTED: hypothetical protein XP_002347660 
LOC100288349          0.009   PREDICTED: hypothetical protein XP_002342169 
EIF4G1                0.009   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.009   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.009   eukaryotic translation initiation factor 4 gamma, 1 ...
SYAP1                 0.009   SYAP1 protein 
DNAH2                 0.009   dynein heavy chain domain 3 
RANBP9                0.009   RAN binding protein 9 
SETD1A                0.009   SET domain containing 1A 
AMOT                  0.009   angiomotin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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