LOC100133001 8077

Name: LOC100133001	Sequence: fasta or formatted (299aa)		NCBI GI: 169177031
Description: PREDICTED: similar to hCG30082, partial		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 18 2 C cysteine 7.0 21 2 D aspartate 9.7 29 1 E glutamate 2.7 8 1 F phenylalanine 0.3 1 1 G glycine 7.4 22 1 H histidine 5.7 17 1 I isoleucine 3.7 11 1 K lysine 1.3 4 1 L leucine 5.0 15 3 M methionine 0.7 2 1 N asparagine 0.0 0 0 P proline 16.7 50 1 Q glutamine 1.0 3 1 R arginine 18.1 54 2 S serine 2.0 6 2 T threonine 10.0 30 1 V valine 2.0 6 1 W tryptophan 0.3 1 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG30082, partial LOC100133636 0.093 PREDICTED: similar to hCG1806822 C2orf16 0.079 hypothetical protein LOC84226 KPRP 0.077 keratinocyte proline-rich protein LOC100290496 0.060 PREDICTED: hypothetical protein XP_002348126 LOC645971 0.045 PREDICTED: similar to hCG2036794 LOC645971 0.045 PREDICTED: similar to hCG2036794 LOC645971 0.045 PREDICTED: similar to hCG2036794 MUC2 0.042 mucin 2 precursor TBKBP1 0.042 TBK1 binding protein 1 OGFR 0.040 opioid growth factor receptor SPRR3 0.040 small proline-rich protein 3 SPRR3 0.040 small proline-rich protein 3 PRG4 0.037 proteoglycan 4 isoform D PRG4 0.037 proteoglycan 4 isoform C PRG4 0.037 proteoglycan 4 isoform B PRG4 0.037 proteoglycan 4 isoform A BUD13 0.037 BUD13 homolog isoform 2 LOC100134147 0.036 PREDICTED: hypothetical protein NACA 0.034 nascent polypeptide-associated complex alpha subuni... DIDO1 0.032 death inducer-obliterator 1 isoform c LDB3 0.029 LIM domain binding 3 isoform 1 RBM12B 0.029 RNA binding motif protein 12B SRRM2 0.023 splicing coactivator subunit SRm300 SRRM1 0.023 serine/arginine repetitive matrix 1 MADCAM1 0.022 mucosal vascular addressin cell adhesion molecule 1... TRIOBP 0.022 TRIO and F-actin binding protein isoform 6 LDB3 0.022 LIM domain binding 3 isoform 2 LOC100287723 0.022 PREDICTED: hypothetical protein XP_002342271 TROAP 0.020 tastin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.