Guide to the Human Genome
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Name: PHLDB3 Sequence: fasta or formatted (640aa) NCBI GI: 157266264
Description:

pleckstrin homology-like domain, family B, member 3

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         56           2
 C cysteine            2.0         13           3
 D aspartate           3.3         21           1
 E glutamate          11.9         76           4
 F phenylalanine       1.7         11           1
 G glycine             7.2         46           2
 H histidine           2.2         14           1
 I isoleucine          2.0         13           1
 K lysine              3.0         19           2
 L leucine            10.2         65           2
 M methionine          2.0         13           1
 N asparagine          1.2          8           1
 P proline             7.2         46           3
 Q glutamine           8.6         55           2
 R arginine           11.1         71           2
 S serine              7.0         45           2
 T threonine           3.8         24           1
 V valine              4.7         30           1
 W tryptophan          0.6          4           1
 Y tyrosine            1.6         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology-like domain, family B, member 3... 
PHLDB1                0.180   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.144   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.144   pleckstrin homology-like domain, family B, member 1 ...
PHLDB2                0.140   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.140   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.140   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.140   pleckstrin homology-like domain, family B, member 2 ...
LOC100133220          0.042   PREDICTED: hypothetical protein 
TCHH                  0.041   trichohyalin 
KIF7                  0.039   kinesin family member 7 
MAP4K4                0.038   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.038   mitogen-activated protein kinase kinase kinase kinas...
GIGYF2                0.038   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.038   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.038   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.038   GRB10 interacting GYF protein 2 isoform b 
LOC100133758          0.038   PREDICTED: hypothetical protein, partial 
MAP4K4                0.037   mitogen-activated protein kinase kinase kinase kinas...
CEP164                0.036   centrosomal protein 164kDa 
MAP7D1                0.036   MAP7 domain containing 1 
DEF6                  0.035   differentially expressed in FDCP 6 homolog 
LOC647042             0.035   PREDICTED: hypothetical protein isoform 1 
AKAP9                 0.034   A-kinase anchor protein 9 isoform 3 
CDC42BPG              0.034   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
PLEC1                 0.034   plectin 1 isoform 11 
PLEC1                 0.034   plectin 1 isoform 10 
PLEC1                 0.034   plectin 1 isoform 8 
PLEC1                 0.034   plectin 1 isoform 7 
PLEC1                 0.034   plectin 1 isoform 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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