Guide to the Human Genome
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Name: DNAH2 Sequence: fasta or formatted (4427aa) NCBI GI: 75677365
Description:

dynein heavy chain domain 3

Referenced in:

Dynein and Dynactin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2        276           3
 C cysteine            1.4         60           1
 D aspartate           5.3        236           2
 E glutamate           7.7        341           3
 F phenylalanine       4.2        187           2
 G glycine             4.8        212           3
 H histidine           2.1         93           2
 I isoleucine          6.1        272           2
 K lysine              6.2        273           3
 L leucine            11.6        512           3
 M methionine          3.0        132           2
 N asparagine          4.2        188           2
 P proline             4.3        192           2
 Q glutamine           4.9        217           3
 R arginine            5.5        245           3
 S serine              6.2        273           2
 T threonine           5.3        236           2
 V valine              6.0        267           2
 W tryptophan          1.9         84           1
 Y tyrosine            3.0        131           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynein heavy chain domain 3 
DNAH6                 0.291   dynein, axonemal, heavy polypeptide 6 
DNAH1                 0.282   dynein, axonemal, heavy chain 1 
DNAH7                 0.274   dynein, axonemal, heavy chain 7 
DNAH10                0.273   dynein, axonemal, heavy chain 10 
DNAH3                 0.271   dynein, axonemal, heavy chain 3 
DNAH9                 0.246   dynein, axonemal, heavy chain 9 isoform 2 
DNAH17                0.245   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.241   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.241   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH5                 0.239   dynein, axonemal, heavy chain 5 
DNAH11                0.238   dynein, axonemal, heavy chain 11 
DNAH8                 0.233   dynein, axonemal, heavy polypeptide 8 
DYNC1H1               0.158   cytoplasmic dynein 1 heavy chain 1 
DYNC2H1               0.151   dynein, cytoplasmic 2, heavy chain 1 
DNAH12                0.127   dynein heavy chain domain 2 isoform 1 
DNAH14                0.098   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
DNAH9                 0.052   dynein, axonemal, heavy chain 9 isoform 1 
DNHD1                 0.027   dynein heavy chain domain 1 isoform 1 
CENPE                 0.004   centromere protein E 
CALD1                 0.004   caldesmon 1 isoform 1 
CEP250                0.003   centrosomal protein 2 
CCDC158               0.003   coiled-coil domain containing 158 
TPR                   0.003   nuclear pore complex-associated protein TPR 
ERC1                  0.003   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.003   RAB6-interacting protein 2 isoform delta 
CGNL1                 0.003   cingulin-like 1 
KTN1                  0.003   kinectin 1 isoform a 
KTN1                  0.003   kinectin 1 isoform c 
KTN1                  0.003   kinectin 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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