Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ANKRD33B Sequence: fasta or formatted (494aa) NCBI GI: 169167742
Description:

PREDICTED: ankyrin repeat domain 33B

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [1006aa] PREDICTED: ankyrin repeat domain 33B
alt mRNA [494aa] PREDICTED: ankyrin repeat domain 33B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         57           2
 C cysteine            2.0         10           1
 D aspartate           4.7         23           2
 E glutamate           8.9         44           3
 F phenylalanine       2.0         10           1
 G glycine             7.9         39           3
 H histidine           1.4          7           1
 I isoleucine          1.8          9           2
 K lysine              3.8         19           2
 L leucine             7.5         37           2
 M methionine          1.8          9           1
 N asparagine          1.8          9           2
 P proline             9.5         47           4
 Q glutamine           4.0         20           1
 R arginine           10.3         51           3
 S serine              5.5         27           2
 T threonine           5.3         26           2
 V valine              7.3         36           3
 W tryptophan          1.0          5           1
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              1.000   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              0.921   PREDICTED: ankyrin repeat domain 33B 
ANKRD33               0.209   ankyrin repeat domain 33 isoform 2 
ANKRD33               0.193   ankyrin repeat domain 33 isoform 1 
LOC100291911          0.073   PREDICTED: similar to Putative uncharacterized prot...
LOC100287484          0.073   PREDICTED: hypothetical protein XP_002343105 
ANKRD50               0.051   ankyrin repeat domain 50 
FEM1A                 0.047   fem-1 homolog a 
ANKDD1A               0.047   ankyrin repeat and death domain containing 1A 
ANKHD1                0.045   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.045   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.045   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.045   ANKHD1-EIF4EBP3 protein 
LOC100131244          0.042   PREDICTED: similar to kinase D-interacting substrat...
LOC100131244          0.042   PREDICTED: similar to kinase D-interacting substrat...
KIDINS220             0.042   kinase D-interacting substrate of 220 kDa 
ANKRD29               0.041   ankyrin repeat domain 29 
LOC100131244          0.040   PREDICTED: similar to kinase D-interacting substrat...
RAI14                 0.039   retinoic acid induced 14 isoform d 
RAI14                 0.039   retinoic acid induced 14 isoform c 
RAI14                 0.039   retinoic acid induced 14 isoform b 
RAI14                 0.039   retinoic acid induced 14 isoform a 
RAI14                 0.039   retinoic acid induced 14 isoform a 
RAI14                 0.039   retinoic acid induced 14 isoform a 
ESPN                  0.038   espin 
ANKRD17               0.036   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.036   ankyrin repeat domain protein 17 isoform b 
DAPK1                 0.035   death-associated protein kinase 1 
FEM1C                 0.034   feminization 1 homolog a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press