Guide to the Human Genome
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Name: ANKRD46 Sequence: fasta or formatted (228aa) NCBI GI: 38257146
Description:

ankyrin repeat domain 46

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         13           3
 C cysteine            1.8          4           1
 D aspartate           5.3         12           1
 E glutamate           6.1         14           2
 F phenylalanine       4.8         11           1
 G glycine             7.9         18           1
 H histidine           3.5          8           1
 I isoleucine          4.4         10           1
 K lysine              3.1          7           1
 L leucine            14.5         33           3
 M methionine          1.3          3           1
 N asparagine          5.7         13           1
 P proline             2.6          6           1
 Q glutamine           5.3         12           2
 R arginine            4.8         11           2
 S serine              7.5         17           2
 T threonine           4.8         11           2
 V valine              7.9         18           1
 W tryptophan          0.9          2           1
 Y tyrosine            2.2          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 46 
ANKRD54               0.111   ankyrin repeat domain 54 
LOC100131244          0.104   PREDICTED: similar to kinase D-interacting substrat...
LOC100131244          0.104   PREDICTED: similar to kinase D-interacting substrat...
LOC100131244          0.104   PREDICTED: similar to kinase D-interacting substrat...
TANC1                 0.100   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.100   tetratricopeptide repeat, ankyrin repeat and coiled...
DAPK1                 0.100   death-associated protein kinase 1 
ANKRD39               0.097   ankyrin repeat domain 39 
ANK2                  0.093   ankyrin 2 isoform 3 
ANK2                  0.093   ankyrin 2 isoform 2 
ANK2                  0.093   ankyrin 2 isoform 1 
LOC441869             0.093   hypothetical protein LOC441869 
ANKK1                 0.093   ankyrin repeat and kinase domain containing 1 
PPP1R12A              0.093   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.093   protein phosphatase 1, regulatory (inhibitor) subunit...
ANKRD27               0.090   ankyrin repeat domain 27 (VPS9 domain) 
ANK3                  0.090   ankyrin 3 isoform 1 
ANKRD17               0.088   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.088   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.086   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.086   ANKHD1-EIF4EBP3 protein 
ANK1                  0.086   ankyrin 1 isoform 9 
ANK1                  0.086   ankyrin 1 isoform 1 
ANK1                  0.086   ankyrin 1 isoform 3 
ANK1                  0.086   ankyrin 1 isoform 2 
ANK1                  0.086   ankyrin 1 isoform 4 
TANC2                 0.086   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD44               0.083   ankyrin repeat domain 44 
UACA                  0.083   uveal autoantigen with coiled-coil domains and ankyr...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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