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Search of human proteins with 169208142
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169208142 PREDICTED: similar to FLJ00287 protein [Homo
sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169208142 PREDICTED: similar to FLJ00287 protein [Homo sapiens] 440 e-124
gi|169217537 PREDICTED: similar to FLJ00287 protein [Homo sapiens] 424 e-119
gi|169208152 PREDICTED: similar to FLJ00287 protein [Homo sapiens] 387 e-108
gi|52485606 formin-like 2 [Homo sapiens] 45 6e-05
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ... 43 2e-04
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ... 43 2e-04
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ... 43 2e-04
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 42 3e-04
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 42 3e-04
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 42 3e-04
gi|54860079 nadrin isoform 1 [Homo sapiens] 42 3e-04
gi|54860105 nadrin isoform 2 [Homo sapiens] 42 3e-04
gi|145207994 hairy and enhancer of split 7 [Homo sapiens] 42 3e-04
gi|11415052 retinoid X receptor, beta [Homo sapiens] 42 4e-04
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 41 6e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 8e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 41 8e-04
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 40 0.001
gi|40353727 synaptopodin isoform A [Homo sapiens] 40 0.001
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 40 0.001
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 40 0.001
gi|118402590 myosin XV [Homo sapiens] 39 0.002
gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo ... 39 0.002
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 39 0.002
gi|210032580 SET domain containing 1B [Homo sapiens] 39 0.002
gi|146134388 YLP motif containing 1 [Homo sapiens] 39 0.002
gi|33286436 gametogenetin [Homo sapiens] 39 0.002
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 39 0.003
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 39 0.003
gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 39 0.004
>gi|169208142 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
Length = 205
Score = 440 bits (1131), Expect = e-124
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MRERPSGSAECQRGRTGPKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGG 60
MRERPSGSAECQRGRTGPKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGG
Sbjct: 1 MRERPSGSAECQRGRTGPKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGG 60
Query: 61 LWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAP 120
LWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAP
Sbjct: 61 LWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAP 120
Query: 121 RLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLS 180
RLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLS
Sbjct: 121 RLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLS 180
Query: 181 RRSGVCRGADRRLWKLQGLPAGGRM 205
RRSGVCRGADRRLWKLQGLPAGGRM
Sbjct: 181 RRSGVCRGADRRLWKLQGLPAGGRM 205
>gi|169217537 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
Length = 205
Score = 424 bits (1091), Expect = e-119
Identities = 198/203 (97%), Positives = 199/203 (98%)
Query: 1 MRERPSGSAECQRGRTGPKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGG 60
MRERPSGSAECQRGRTGPKAGWQLLPTARSPAQHP ESTSVLLNWVIRALGPLVPPTEGG
Sbjct: 1 MRERPSGSAECQRGRTGPKAGWQLLPTARSPAQHPPESTSVLLNWVIRALGPLVPPTEGG 60
Query: 61 LWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAP 120
LWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPI SPDPAVSSAHSFPAP
Sbjct: 61 LWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIHSPDPAVSSAHSFPAP 120
Query: 121 RLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLS 180
RLAWSCVL+SPLSLPLSK P LYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLS
Sbjct: 121 RLAWSCVLHSPLSLPLSKLPPLYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLS 180
Query: 181 RRSGVCRGADRRLWKLQGLPAGG 203
RRSGVCRGADRRLWKLQGLPAGG
Sbjct: 181 RRSGVCRGADRRLWKLQGLPAGG 203
>gi|169208152 PREDICTED: similar to FLJ00287 protein [Homo sapiens]
Length = 347
Score = 387 bits (993), Expect = e-108
Identities = 180/184 (97%), Positives = 181/184 (98%)
Query: 20 AGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEP 79
AGWQLLPTARSPAQHP ESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEP
Sbjct: 162 AGWQLLPTARSPAQHPPESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEP 221
Query: 80 GEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSKP 139
GEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVL+SPLSLPLSK
Sbjct: 222 GEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLHSPLSLPLSKL 281
Query: 140 PALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLSRRSGVCRGADRRLWKLQGL 199
P LYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLSRRSGVCRGADRRLWKLQGL
Sbjct: 282 PPLYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLSRRSGVCRGADRRLWKLQGL 341
Query: 200 PAGG 203
PAGG
Sbjct: 342 PAGG 345
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 44.7 bits (104), Expect = 6e-05
Identities = 35/100 (35%), Positives = 40/100 (40%), Gaps = 22/100 (22%)
Query: 51 GPLVPPTEGGLWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPA 110
GPL PP PL TPE + G P P PP PP P PP P P
Sbjct: 524 GPLPPPPP----------PLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPP 573
Query: 111 V--SSAHSFPAPRLAWSCVLYSPLSLPLSKPPALYLTHSP 148
+ +A + PAP PL+ PL P L T SP
Sbjct: 574 LPGPAAETVPAP----------PLAPPLPSAPPLPGTSSP 603
Score = 32.0 bits (71), Expect = 0.38
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 77 PEPGEPGSPLPASPHPPLQPPA---FPDPPIRSPDPAVSSAHSFPAPRLAWS 125
P P P P P P PPL PA P PP+ P P+ +P + ++
Sbjct: 557 PPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPGTSSPTVVFN 608
>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
sapiens]
Length = 218
Score = 42.7 bits (99), Expect = 2e-04
Identities = 35/92 (38%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 60 GLWSDQVSWPLWEDVKTPEPGEPGSPLPASP-HPPLQPPAFPDPPIRSPDPAVSSAHSFP 118
GLWS P K P P +P PLP +P PPL PP P PP+ P P P
Sbjct: 20 GLWSPPPPLP---PRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKP-----P 71
Query: 119 AP-RLAWSCVLYSPLSLPLSKPPALYLTHSPL 149
+P LA S V P P S L S L
Sbjct: 72 SPLGLAQSKVTLFPSISPSSMASLAALASSSL 103
Score = 36.6 bits (83), Expect = 0.015
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSP----------DPAVSSAHSFPAPRLAWSC 126
P P P P P P PPL PP P PP SP P++S + LA S
Sbjct: 45 PNPPRPPLPPPRPPKPPLPPPRPPKPP--SPLGLAQSKVTLFPSISPSSMASLAALASSS 102
Query: 127 VLYSPLSLPLSKPPALYLT 145
+L S PL P + +T
Sbjct: 103 LLKSTKPNPLEDPVSRSVT 121
>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
sapiens]
Length = 218
Score = 42.7 bits (99), Expect = 2e-04
Identities = 35/92 (38%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 60 GLWSDQVSWPLWEDVKTPEPGEPGSPLPASP-HPPLQPPAFPDPPIRSPDPAVSSAHSFP 118
GLWS P K P P +P PLP +P PPL PP P PP+ P P P
Sbjct: 20 GLWSPPPPLP---PRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKP-----P 71
Query: 119 AP-RLAWSCVLYSPLSLPLSKPPALYLTHSPL 149
+P LA S V P P S L S L
Sbjct: 72 SPLGLAQSKVTLFPSISPSSMASLAALASSSL 103
Score = 36.6 bits (83), Expect = 0.015
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSP----------DPAVSSAHSFPAPRLAWSC 126
P P P P P P PPL PP P PP SP P++S + LA S
Sbjct: 45 PNPPRPPLPPPRPPKPPLPPPRPPKPP--SPLGLAQSKVTLFPSISPSSMASLAALASSS 102
Query: 127 VLYSPLSLPLSKPPALYLT 145
+L S PL P + +T
Sbjct: 103 LLKSTKPNPLEDPVSRSVT 121
>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
sapiens]
Length = 218
Score = 42.7 bits (99), Expect = 2e-04
Identities = 35/92 (38%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 60 GLWSDQVSWPLWEDVKTPEPGEPGSPLPASP-HPPLQPPAFPDPPIRSPDPAVSSAHSFP 118
GLWS P K P P +P PLP +P PPL PP P PP+ P P P
Sbjct: 20 GLWSPPPPLP---PRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKP-----P 71
Query: 119 AP-RLAWSCVLYSPLSLPLSKPPALYLTHSPL 149
+P LA S V P P S L S L
Sbjct: 72 SPLGLAQSKVTLFPSISPSSMASLAALASSSL 103
Score = 36.6 bits (83), Expect = 0.015
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSP----------DPAVSSAHSFPAPRLAWSC 126
P P P P P P PPL PP P PP SP P++S + LA S
Sbjct: 45 PNPPRPPLPPPRPPKPPLPPPRPPKPP--SPLGLAQSKVTLFPSISPSSMASLAALASSS 102
Query: 127 VLYSPLSLPLSKPPALYLT 145
+L S PL P + +T
Sbjct: 103 LLKSTKPNPLEDPVSRSVT 121
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 79 PGEPGSPLPASPH--PPLQPPAFPDPPIRSP------DPAVSSAHSFPAP 120
PGEP S +PA+P PPLQPP PDP R P D A SS+ S P
Sbjct: 798 PGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPP 847
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 79 PGEPGSPLPASPH--PPLQPPAFPDPPIRSP------DPAVSSAHSFPAP 120
PGEP S +PA+P PPLQPP PDP R P D A SS+ S P
Sbjct: 798 PGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPP 847
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 79 PGEPGSPLPASPH--PPLQPPAFPDPPIRSP------DPAVSSAHSFPAP 120
PGEP S +PA+P PPLQPP PDP R P D A SS+ S P
Sbjct: 798 PGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPP 847
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 42.4 bits (98), Expect = 3e-04
Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 25/122 (20%)
Query: 77 PEPGEPGSPLPASP----------HPPLQPPAFPDPPIRSPDPAV----------SSAHS 116
P P +PG+P P P HP P P PP RSP P S+
Sbjct: 638 PAPPKPGNPPPGHPGGQSSSGTSQHP---PSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQ 694
Query: 117 FPAPRLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQ 176
APR S + SP+ P PP +PL H +Q P + + G + +
Sbjct: 695 LSAPRRYSSSL--SPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSH 752
Query: 177 TP 178
TP
Sbjct: 753 TP 754
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 42.4 bits (98), Expect = 3e-04
Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 25/122 (20%)
Query: 77 PEPGEPGSPLPASP----------HPPLQPPAFPDPPIRSPDPAV----------SSAHS 116
P P +PG+P P P HP P P PP RSP P S+
Sbjct: 560 PAPPKPGNPPPGHPGGQSSSGTSQHP---PSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQ 616
Query: 117 FPAPRLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQ 176
APR S + SP+ P PP +PL H +Q P + + G + +
Sbjct: 617 LSAPRRYSSSL--SPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSH 674
Query: 177 TP 178
TP
Sbjct: 675 TP 676
>gi|145207994 hairy and enhancer of split 7 [Homo sapiens]
Length = 225
Score = 42.4 bits (98), Expect = 3e-04
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 75 KTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSL 134
K P P +P P P +P P L P A P P V H P+PR AWS L SP +
Sbjct: 129 KPPRP-KPVDPRPPAPRPSLDPAAPALGPALHQRPPVHQGH--PSPRCAWSPSLCSPRAG 185
Query: 135 PLSKPPAL--YLTHSPLRHQ---STQAQVPAPHLYSQTW 168
P L L P H+ + +A +P P + + W
Sbjct: 186 DSGAPAPLTGLLPPPPPPHRQDGAPKAPLPPPPAFWRPW 224
Score = 28.9 bits (63), Expect = 3.2
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 19/86 (22%)
Query: 29 RSPAQHPSESTSVLLNWVIRALGPLV---PPTEGGLWSDQVSWPLWEDVKTPEPGEPGSP 85
R PA PS L+ ALGP + PP G S + +W + +P G+ G+P
Sbjct: 139 RPPAPRPS------LDPAAPALGPALHQRPPVHQGHPSPRCAWS--PSLCSPRAGDSGAP 190
Query: 86 LPAS--------PHPPLQPPAFPDPP 103
P + PH P P PP
Sbjct: 191 APLTGLLPPPPPPHRQDGAPKAPLPP 216
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 42.0 bits (97), Expect = 4e-04
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 77 PEPGEPGSPLPASPHPPL------QPPAFPDPPIRSPDPAVSSAHSFP 118
P P PG PLP S P L PP P PP+ SP P +SS+ P
Sbjct: 96 PPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSP 143
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 41.2 bits (95), Expect = 6e-04
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPL 136
P P EP SP A P P + PAFP P + +P+ + S+A + P P + S P
Sbjct: 1125 PTPEEPASPAAAVPTP--EEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAES 1182
Query: 137 SKPPALYLTHSPLRHQSTQAQVPAPHLYSQTWE 169
+ A+ T S A VP P T E
Sbjct: 1183 ASFAAVVATLE--EPTSPAASVPTPAAMVATLE 1213
Score = 34.7 bits (78), Expect = 0.058
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPL 136
P P EP SP A+ PP + P P + +P+ S A + P P S P
Sbjct: 1021 PTPEEPTSP--AAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEP 1078
Query: 137 SKPPALYLTHSPLRHQSTQAQVPAP 161
+ P A T P S A VP P
Sbjct: 1079 TSPAAAVPT--PEEPTSPAAAVPTP 1101
Score = 34.7 bits (78), Expect = 0.058
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 22/116 (18%)
Query: 16 TGPKAGWQLLPTARSPAQ------HPSESTSVLLNWVIRALGPLVPPTEGG---LWSDQV 66
T P A +PT+ PA +P E TS A+ L PT L +++
Sbjct: 1216 TSPAAS---VPTSEEPASLAAAVSNPEEPTSPAA-----AVPTLEEPTSSAAAVLTPEEL 1267
Query: 67 SWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRL 122
S P P P EP SP A + L+ PA P + +P+ A A S P P +
Sbjct: 1268 SSPA---ASVPTPEEPASPAAAVSN--LEEPASPAAAVPTPEVAAIPAASVPTPEV 1318
Score = 33.1 bits (74), Expect = 0.17
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSP-LSLP 135
P P EP SP A P P + PA P + +P+ S A + P P +P + P
Sbjct: 1099 PTPEEPTSPAAAVPTP--EEPASPAAAVPTPEEPASPAAAVPTPE---EPAFPAPAVPTP 1153
Query: 136 LSKPPALYLTHSPLRHQSTQAQVPAP 161
A +P S A VP P
Sbjct: 1154 EESASAAVAVPTPEESASPAAAVPTP 1179
Score = 31.2 bits (69), Expect = 0.64
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 74 VKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLS 133
V+ P EP SP A+ P + P P + +P+ S A + P P S P
Sbjct: 992 VRVSTPEEPASP--AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTP 1049
Query: 134 LPLSKPPALYLTHSPLRHQSTQAQVPAP 161
+ P A T P S A VP P
Sbjct: 1050 EEPTSPAAAVPT--PEEPTSPAAAVPTP 1075
Score = 30.4 bits (67), Expect = 1.1
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 11/94 (11%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSP----- 131
P P EP SP A+ P + P P + +P+ S A + P P S P
Sbjct: 1073 PTPEEPTSP--AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEP 1130
Query: 132 ----LSLPLSKPPALYLTHSPLRHQSTQAQVPAP 161
++P + PA P +S A V P
Sbjct: 1131 ASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVP 1164
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 40.8 bits (94), Expect = 8e-04
Identities = 60/193 (31%), Positives = 78/193 (40%), Gaps = 44/193 (22%)
Query: 2 RERPSGSAECQR----------------GRTGPKAGWQLLPTARSPAQHPSESTSVLLNW 45
R RPS QR R+GP A T R+PA HPS+ L
Sbjct: 225 RRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG----TPRAPA-HPSQPKPKGL-- 277
Query: 46 VIRALGP--LVPPTE------GGLWSDQVSWPLWEDVKT---PEPGEPGSPLPAS--PHP 92
+AL P + PP + G L S ++ P K P P +PLPA+ P P
Sbjct: 278 --QALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSP 335
Query: 93 PLQPPAFPDPPIRSPDPAVSSAHSFPA--PRLAWSCVLYSPLSLP--LSKPPALYLTHSP 148
PL P PP S P++ + S PA P A + P+ P L P + + HS
Sbjct: 336 PLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHS- 394
Query: 149 LRHQSTQAQVPAP 161
L S QA P+P
Sbjct: 395 LTSPSLQAP-PSP 406
Score = 34.7 bits (78), Expect = 0.058
Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 22/126 (17%)
Query: 18 PKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTP 77
P A + P+A P+Q P + L VPP S S P+ P
Sbjct: 679 PPASPPVSPSATPPSQAPPSLAAPPLQ---------VPP------SPPASPPMSPSATPP 723
Query: 78 EPGEP---GSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSL 134
P PL P PP PP P +P P V + P ++ S P+S
Sbjct: 724 PQAPPPLAAPPLQVPPSPPASPPMSPS---ATPPPRVPPLLAAPPLQVPPSPPASLPMS- 779
Query: 135 PLSKPP 140
PL+KPP
Sbjct: 780 PLAKPP 785
Score = 33.5 bits (75), Expect = 0.13
Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 12/133 (9%)
Query: 35 PSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEPGEPGS----PLPASP 90
P E+ S + +A L P GL S +S + TP P P PL A P
Sbjct: 580 PPETPSSIATPPPQAPPALASPPLQGLPSPPLS-----PLATPPPQAPPXLALPPLQAPP 634
Query: 91 HPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSKPPALYLTHSPLR 150
PP PP P+ +P P +A + + +S P+ P S P + ++ S
Sbjct: 635 SPPASPPL---SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 691
Query: 151 HQSTQAQVPAPHL 163
+ AP L
Sbjct: 692 PSQAPPSLAAPPL 704
Score = 32.0 bits (71), Expect = 0.38
Identities = 45/155 (29%), Positives = 57/155 (36%), Gaps = 23/155 (14%)
Query: 5 PSGSAECQRGRTGPKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSD 64
PS +A + P A + P+A P Q P + L VPP S
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ---------VPP------SP 741
Query: 65 QVSWPLWEDVKTPEPGEPGSPLPASPH---PPLQPPAFPDPPIRSPDPAVSSAHSFPAPR 121
S P+ TP P P PL A+P PP P + P P+ P P A + P +
Sbjct: 742 PASPPMSPSA-TPPPRVP--PLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQ 798
Query: 122 LAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQA 156
S P P S P+ L SPL QA
Sbjct: 799 ALPSPPASFPGQAPFS--PSASLPMSPLATPPPQA 831
Score = 31.6 bits (70), Expect = 0.49
Identities = 35/128 (27%), Positives = 44/128 (34%), Gaps = 13/128 (10%)
Query: 18 PKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTP 77
P A L P A Q P+ LL P PP + +S S P+ P
Sbjct: 636 PPASPPLSPLATPSPQAPNALAVHLLQAPFSP--PPSPPVQAP-FSPPASPPVSPSATPP 692
Query: 78 EPGEPG---SPLPASPHPPLQPPAFPD--PPIRSPDPAVSSAHSFPAPRLAWSCVLYSPL 132
P PL P PP PP P PP ++P P + P A P+
Sbjct: 693 SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA-----SPPM 747
Query: 133 SLPLSKPP 140
S + PP
Sbjct: 748 SPSATPPP 755
Score = 30.0 bits (66), Expect = 1.4
Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 21/183 (11%)
Query: 18 PKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPL---VPPTEGGLWSDQVSWPLWEDV 74
P+ L + PA P +S + + A PL + P L S PL + +
Sbjct: 434 PRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPL-QAL 492
Query: 75 KTPEPGEPGSPLPASPHPPLQ------PPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVL 128
+ P +PL + PPL+ PP+ PP P + + S P L +
Sbjct: 493 SSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAP 552
Query: 129 YS---------PLSLPLSKPPALYLTHSPLRHQSTQAQVP--APHLYSQTWEGDDMKTQT 177
+ P PL PP+ T P S P P L S +G +
Sbjct: 553 LTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLS 612
Query: 178 PLS 180
PL+
Sbjct: 613 PLA 615
Score = 28.9 bits (63), Expect = 3.2
Identities = 30/109 (27%), Positives = 37/109 (33%), Gaps = 21/109 (19%)
Query: 18 PKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTP 77
P A + P A P Q P + LL VPP S S L + P
Sbjct: 815 PSASLPMSPLATPPPQAPPVLAAPLLQ---------VPP------SPPASPTLQAPRRPP 859
Query: 78 EPGE------PGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAP 120
PG P L +P PP P P + PD A S+ + P
Sbjct: 860 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTP 908
Score = 27.7 bits (60), Expect = 7.1
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 20/94 (21%)
Query: 74 VKTPEPGEPGSPLPASPHP----------------PLQPPAFPDPPIRS-PDPAVSSAHS 116
++TP P PL A P P P PPA PP++ P P +S +
Sbjct: 558 LETPPCPAP-CPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLAT 616
Query: 117 FP--APRLAWSCVLYSPLSLPLSKPPALYLTHSP 148
P AP L +P S P S P + T SP
Sbjct: 617 PPPQAPPXLALPPLQAPPSPPASPPLSPLATPSP 650
Score = 27.3 bits (59), Expect = 9.3
Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 9/122 (7%)
Query: 30 SPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEPGEPGSPLPAS 89
SP PS + + ++ A VPP S S P+ K P P P
Sbjct: 744 SPPMSPSATPPPRVPPLLAAPPLQVPP------SPPASLPMSPLAKPPPQAPPALATPPL 797
Query: 90 PHPPLQPPAFPDPPIRSPDPAV-SSAHSFPAPRLAWSCVLYSPLSLPLSKPPALYLTHSP 148
P P +FP SP ++ S + P P+ VL +PL PPA +P
Sbjct: 798 QALPSPPASFPGQAPFSPSASLPMSPLATPPPQA--PPVLAAPLLQVPPSPPASPTLQAP 855
Query: 149 LR 150
R
Sbjct: 856 RR 857
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 40.8 bits (94), Expect = 8e-04
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 22/165 (13%)
Query: 4 RPSGSAECQRGRTGPKAGWQLLPTARSPAQH-PSESTSVLLNWVIRALGPLVPPTEGGLW 62
RP+G + G+TG G +R+P+ P+++ S GPL+PP L
Sbjct: 110 RPAGQRDVAGGKTGQGPG------SRAPSPRLPNKTIS----------GPLIPPASPRLG 153
Query: 63 SDQVSWPLWEDVKT-PEPGEPGSPLPASPHPPLQPPAFPDPPIRSP---DPAVSSAHSFP 118
+ + P P P P P PPL PP PI++P P + + P
Sbjct: 154 NTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLP 213
Query: 119 APRLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAPHL 163
C P P PP L S L ++ + Q+ HL
Sbjct: 214 VVAPPVPCAPPPPPPPPPPTPPPL-PPASVLSDKAVKPQLAPLHL 257
Score = 32.0 bits (71), Expect = 0.38
Identities = 43/139 (30%), Positives = 52/139 (37%), Gaps = 20/139 (14%)
Query: 26 PTARSPAQHPSESTSVLLNWVIRA-LGPL-VPPTEGGLWSDQVSWPLWEDVKTPE-PGEP 82
P P P SVL + ++ L PL +PP L PL P EP
Sbjct: 227 PPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPL-------PLLPPCGYPGLKAEP 279
Query: 83 GSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSKPPAL 142
SP + PP PP P PP S P S PAP L + S P PP
Sbjct: 280 ASPAQDAQEPPAPPP--PLPPYASCSPRA----SLPAPPLPG---VNSSSETPPPLPPKS 330
Query: 143 YLTHSPLRHQSTQAQVPAP 161
+P + QA +PAP
Sbjct: 331 PSFQAPPQKAGAQA-LPAP 348
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 85 PLPASPHPPLQPPAFPDPPIRSPDPAVSSA 114
P+P P PPL P P PP+ +P P SA
Sbjct: 2 PVPPPPPPPLPP---PPPPLGAPPPPPPSA 28
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 40.4 bits (93), Expect = 0.001
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 23/116 (19%)
Query: 52 PLVPPTEGGLWS----DQVSWPLWEDVKTPEPGEPGSP-LPASPHPPLQP-PAFPDPPIR 105
PL P+ L S + SW + + PG P SP P SP P+ P P FP I
Sbjct: 777 PLPDPSNEELQSSTSLEHRSWTAFS-TSSSSPGTPLSPGNPFSPGTPISPGPIFP---IT 832
Query: 106 SPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAP 161
SP H P+P +SP+S +S P+ + T SPL S+ + P P
Sbjct: 833 SPP-----CHPSPSP--------FSPISSQVSSNPSPHPTSSPLPFSSSTPEFPVP 875
Score = 30.0 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPP 103
PEPG P + +P +P PP P P+ P
Sbjct: 535 PEPGPPPATVPMAPGPPSVFPPEPEEP 561
Score = 30.0 bits (66), Expect = 1.4
Identities = 43/145 (29%), Positives = 53/145 (36%), Gaps = 24/145 (16%)
Query: 30 SPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEPGEPGSPLPAS 89
SP HPS S ++ + + P PT S PL TPE P S P S
Sbjct: 833 SPPCHPSPSPFSPISSQVSS-NPSPHPT---------SSPLPFSSSTPEFPVPLSQCPWS 882
Query: 90 PHPPLQPPAFP--------DPPIRSPDPAVSSAHSFPAPRL-----AWSCVLYSPLSLPL 136
P PP F P P P+ SS S A L A+S + + L
Sbjct: 883 SLPTTSPPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAAPLLSLASAFSLAVMTVAQSLL 942
Query: 137 SKPPALYLTHSPLRHQSTQAQVPAP 161
S P L L+ SP S +P P
Sbjct: 943 SPSPGL-LSQSPPAPPSPLPSLPLP 966
Score = 28.9 bits (63), Expect = 3.2
Identities = 33/121 (27%), Positives = 44/121 (36%), Gaps = 31/121 (25%)
Query: 22 WQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPP----------TEGGLWSDQVSWPLW 71
W LPT P P+ S L + P PP T L S ++ L
Sbjct: 881 WSSLPTTSPPTFSPTCSQVTLSS-------PFFPPCPSTSSFPSTTAAPLLSLASAFSLA 933
Query: 72 -----EDVKTPEPG-------EPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPA 119
+ + +P PG P SPLP+ P PP P + P SP A + + P
Sbjct: 934 VMTVAQSLLSPSPGLLSQSPPAPPSPLPSLPLPPPVAPGGQESP--SPHTAEVESEASPP 991
Query: 120 P 120
P
Sbjct: 992 P 992
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 40.4 bits (93), Expect = 0.001
Identities = 42/121 (34%), Positives = 52/121 (42%), Gaps = 21/121 (17%)
Query: 44 NWVIRALGPLVPPTEGGLWSDQVSWPLWEDV------KTPEPGEPGS--PLPASPH---P 92
+W R++ PL P TE S Q+ L ++ K+ P G+ P P SP P
Sbjct: 731 SWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPP 790
Query: 93 PLQPPAFPDPPIRSPDP------AVSSAHSFPAPRL---AWSCVLYSPLSLPLSKPPALY 143
P PP P P +RSP P AV A P PR A SP S PL PP +
Sbjct: 791 PPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRS-PLPAPPRPF 849
Query: 144 L 144
L
Sbjct: 850 L 850
Score = 27.7 bits (60), Expect = 7.1
Identities = 27/101 (26%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 7 GSAECQRGRTGPKAGWQLLPTARSPAQHPSESTSVLLNWVIRALG----------PLVPP 56
G Q P G + P + S A P + ++ R G P PP
Sbjct: 628 GQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPP 687
Query: 57 TEGGLWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPP 97
G S W +P P EPG S PPL PP
Sbjct: 688 WTPGASRPPSSLDGWV---SPGPWEPGRGSSMSSPPPLPPP 725
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 40.4 bits (93), Expect = 0.001
Identities = 40/125 (32%), Positives = 48/125 (38%), Gaps = 19/125 (15%)
Query: 10 ECQRGRTGPKAGWQLLPTARS-PAQHPSESTSVLLNWVIRALGPLVPPTEG--------- 59
E +R R G AG +LL R P + SVL+ + P PP G
Sbjct: 4 EAERRRGGGAAGARLLERYRRVPGVRALRADSVLIIETVPGFPP-APPAPGAAQIRAAEV 62
Query: 60 ---GLWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHS 116
G +VS L P GSP A P PP PPA P PP +P P +
Sbjct: 63 LVYGAPPGRVSRLLERFDPPAAPRRRGSPERARPPPPPPPPAPPRPPPAAPSPPAA---- 118
Query: 117 FPAPR 121
P PR
Sbjct: 119 -PGPR 122
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 40.4 bits (93), Expect = 0.001
Identities = 40/125 (32%), Positives = 48/125 (38%), Gaps = 19/125 (15%)
Query: 10 ECQRGRTGPKAGWQLLPTARS-PAQHPSESTSVLLNWVIRALGPLVPPTEG--------- 59
E +R R G AG +LL R P + SVL+ + P PP G
Sbjct: 4 EAERRRGGGAAGARLLERYRRVPGVRALRADSVLIIETVPGFPP-APPAPGAAQIRAAEV 62
Query: 60 ---GLWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHS 116
G +VS L P GSP A P PP PPA P PP +P P +
Sbjct: 63 LVYGAPPGRVSRLLERFDPPAAPRRRGSPERARPPPPPPPPAPPRPPPAAPSPPAA---- 118
Query: 117 FPAPR 121
P PR
Sbjct: 119 -PGPR 122
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 39.3 bits (90), Expect = 0.002
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 80 GEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSS-AHSFPAPRLAWSCVLYSPLSLPLSK 138
G PGSPLP SP PP P P RS S H++ + + + LP +
Sbjct: 834 GPPGSPLPGSPRPPSPPLGLCHSPRRSSLNLPSRLPHTWRRLSEPPTRAVKPQVRLPFHR 893
Query: 139 PPALYLTHSPLRHQST-----QAQVP--APHLYSQTWEGDDMKTQTPLS 180
PP +PL H+ + ++ P P L + +W+ D TQ P S
Sbjct: 894 PPRAGAWRAPLEHRESPREPEDSETPWTVPPL-APSWDVDMPPTQRPPS 941
Score = 35.4 bits (80), Expect = 0.034
Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 17/103 (16%)
Query: 48 RALGPLVPPTEGGLWSDQVSWPLWEDVKTPEPGEPGSPLPASPHPPLQP-------PAFP 100
R P P WS +S P+ P P G P P PPL P PA P
Sbjct: 643 RPPAPQPAPRTLSHWSALLSPPV-----PPRPPSSGPP----PAPPLSPALSGLPRPASP 693
Query: 101 DPPIRS-PDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSKPPAL 142
+R P P + AH PAP+ +W + P P P L
Sbjct: 694 YGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSPEVPPDLL 736
Score = 27.7 bits (60), Expect = 7.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 80 GEPGSPLPASPHPPLQPPAFPDPPIR-SPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSK 138
G PG+ AS P A P P +R SP S + P+P+L+ + P LP ++
Sbjct: 756 GFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPPAR 815
Query: 139 PP 140
P
Sbjct: 816 RP 817
>gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo
sapiens]
Length = 220
Score = 39.3 bits (90), Expect = 0.002
Identities = 41/127 (32%), Positives = 48/127 (37%), Gaps = 33/127 (25%)
Query: 46 VIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEPGEPGS------------PLPASPHPP 93
V+R +VPP G V P D P PG P S P P SP
Sbjct: 76 VLRVGAKVVPPP--GSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSV 133
Query: 94 LQPPAFPD---PPIRSPD-------------PAVSSAHSFPAPRLAWSCV--LYSPLSLP 135
+ PP PD PP RSPD PA + A P W V SP +P
Sbjct: 134 VLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVP 193
Query: 136 LSKPPAL 142
S+PP+L
Sbjct: 194 -SRPPSL 199
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 39.3 bits (90), Expect = 0.002
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 69 PLWEDVKTPEPGEPGSPLPASPHPP-----LQPPAFPDPPIRSPDPAVSSAHSFPAPRLA 123
P W +P PG PGSP P+SP+ P + P P P + +P ++ +P +
Sbjct: 1563 PAW----SPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSP--AYEPRSPGGYTPQSPSYS 1616
Query: 124 WSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAPHLYSQT 167
+ YSP S S Y SP ++ + P YS T
Sbjct: 1617 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Score = 28.9 bits (63), Expect = 3.2
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 82 PGSP--LPASP-HPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSK 138
P SP P SP + P P P P +P S +S +P + + YSP S S
Sbjct: 1750 PTSPNYTPTSPSYSPTSPSYSPTSPNYTP---TSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Query: 139 PPALYLTHSPLRHQSTQAQVPAPHLYSQT 167
Y SP S+ + P+ YS T
Sbjct: 1807 SSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Score = 27.7 bits (60), Expect = 7.1
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 82 PGSP--LPASP-HPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSK 138
P SP P SP + P P P P SP S ++S +PR Y+P S S
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSP---TSPSYSPSSPRYTPQSPTYTPSSPSYSP 1827
Query: 139 PPALYLTHSPLRHQSTQAQVPAPHLYSQT 167
Y SP ++ + P+ Y+ T
Sbjct: 1828 SSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 39.3 bits (90), Expect = 0.002
Identities = 36/106 (33%), Positives = 40/106 (37%), Gaps = 18/106 (16%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFP-DPPIRSPDPAVSSAHSF----PAPRLAWSCVLYSP 131
P PG P PLP P PP P FP PP+ P P AH P P A V P
Sbjct: 683 PPPGFP--PLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAVTVPPPPLPAPPGVPPPP 740
Query: 132 LSLPLSK-PPALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQ 176
+ PL PP L+ QV H+ W G M Q
Sbjct: 741 ILPPLPPFPPGLF----------PVMQVDMSHVLGGQWGGMPMSFQ 776
Score = 32.7 bits (73), Expect = 0.22
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 81 EPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSA 114
EP LP PPL PP P PP P+P + A
Sbjct: 1269 EPPMMLPLPLQPPLPPPRPPRPPSPPPEPETTDA 1302
Score = 30.8 bits (68), Expect = 0.84
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 12/66 (18%)
Query: 51 GPLVPPTEGG-------LWSDQVSWPLWEDVKTPEP-----GEPGSPLPASPHPPLQPPA 98
GPLV P G L Q P++ P G P P P PP PP
Sbjct: 1491 GPLVRPPAGAALGRELLLLPGQPQTPVFPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPP 1550
Query: 99 FPDPPI 104
P PP+
Sbjct: 1551 PPPPPV 1556
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 39.3 bits (90), Expect = 0.002
Identities = 45/144 (31%), Positives = 57/144 (39%), Gaps = 14/144 (9%)
Query: 26 PTARSPAQHPSESTSVLLNWV---IRALGP---LVPPTEGGLWSDQVSWPLWEDVKTPEP 79
P P PS TSV + + + GP L PP+ V P P P
Sbjct: 558 PGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPP 617
Query: 80 GEPGSPLP-ASPHPPLQPPAFPD--PP--IRSPDPAVSSAHSFPAPRLAWSCVLYSPLSL 134
P PL A+P P + PP P PP +P P SS+ S P +L +P+S
Sbjct: 618 VMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSF 677
Query: 135 PLSKPPALYLTHSPLRHQSTQAQV 158
S PP Y H PL+ QV
Sbjct: 678 G-SAPPTTY--HPPLQSAGPSEQV 698
Score = 34.3 bits (77), Expect = 0.076
Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Query: 71 WEDVKTPEPGEPGSPLPASPHPPLQPPAFPD--PPIRSPDPAV--SSAHSFPAPRLAWSC 126
+ + P P P LP S PP+ PPA P PP P P + S S P P + S
Sbjct: 523 YSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPS- 581
Query: 127 VLYSPLSLPLSKPPALYLTHSP--LRHQSTQAQVPAP 161
L S P+ PP+L P L S + P P
Sbjct: 582 -LSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPP 617
Score = 29.6 bits (65), Expect = 1.9
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 15/85 (17%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPL 136
P P P S P + P PPA P P P + S+ AP ++S S S
Sbjct: 166 PPPQPPPSYYPPTSSQPYLPPAQPSPSQSPP------SQSYLAPTPSYSSSSSSSQS--- 216
Query: 137 SKPPALYLTHSPLRHQSTQAQVPAP 161
YL+HS S+QA P
Sbjct: 217 ------YLSHSQSYLPSSQASPSRP 235
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 39.3 bits (90), Expect = 0.002
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 79 PGEPG----SPLPA-SPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLS 133
PG PG PLP +P P LQPPA P+ P P L +P +
Sbjct: 429 PGPPGLQELPPLPPPTPPPTLQPPALQPTPLPVAPPL--------TPGLGHKESALAPTA 480
Query: 134 LPLSKPPALYLTHSPLRHQSTQAQV--PAPHLYSQTWEGDDMKTQTPLSRRSGVCRGADR 191
P + PPAL +P + V P+P + + +KT+T ++ S RGA R
Sbjct: 481 AP-ALPPALAADQAPAPSPAPAPTVAEPSPPVSAPAPAAAPIKTRTRRNKGSRAARGATR 539
Query: 192 R 192
+
Sbjct: 540 K 540
Score = 28.9 bits (63), Expect = 3.2
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 14/101 (13%)
Query: 15 RTGPKAGWQLLPTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSW------ 68
R GP G Q LP P P+ L + P+ PP GL + +
Sbjct: 428 RPGPP-GLQELPPLPPPTPPPTLQPPALQPTPL----PVAPPLTPGLGHKESALAPTAAP 482
Query: 69 ---PLWEDVKTPEPGEPGSPLPASPHPPLQPPAFPDPPIRS 106
P + P P +P A P PP+ PA PI++
Sbjct: 483 ALPPALAADQAPAPSPAPAPTVAEPSPPVSAPAPAAAPIKT 523
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 38.9 bits (89), Expect = 0.003
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 75 KTPEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSL 134
+TPEP P P P P P P P I + P ++S PA L P+ L
Sbjct: 2035 QTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAPAQPSVPLTQLSMPMEL 2094
Query: 135 PLSKPPALYLTHSPLRHQSTQAQVP 159
P+ P L + PL Q+ AQ+P
Sbjct: 2095 PIFSP--LMMQTMPL--QTLPAQLP 2115
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 38.9 bits (89), Expect = 0.003
Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 26 PTARSPAQHPSESTSVLLNWVIRALGPLVPPTEGGLWSDQVSWPLWEDVKTPEP-GEPGS 84
P +P+ P+ +TS ++RA P P+E L ++E V TP P G P +
Sbjct: 626 PPPPAPSPPPAPATSSRRPLLLRA--PQFTPSEAHL-------KIYESVLTPPPLGAPEA 676
Query: 85 PLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSKPPALYL 144
P P +PP D P AV + PR A V+ +P+ +S A L
Sbjct: 677 PEP-------EPPPADDSPAEPEPRAVGRTNHLSLPRFA--PVVTTPVKAEVSPHGAPAL 727
Query: 145 THSPLRHQSTQAQVPAPHLYSQT 167
++ P TQAQ+ P QT
Sbjct: 728 SNGP----QTQAQLLQPLQALQT 746
Score = 37.4 bits (85), Expect = 0.009
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 72 EDVKTPEPGEPGSPLPASPHPPLQPPA-FPDPPIRSPDPAVSSAHSFPAP 120
E+ K P P P +P SP PPL PP+ P PP+ P P S P+P
Sbjct: 397 EEAKLPPP--PLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSP 444
Score = 37.0 bits (84), Expect = 0.012
Identities = 30/108 (27%), Positives = 38/108 (35%), Gaps = 21/108 (19%)
Query: 77 PEPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPL 136
P P PL P PP+ PP P PP P PA P P + +C S
Sbjct: 419 PPSTSPPPPLCPPPPPPVSPPPLPSPP---PPPAQEEQEESPPPVVPATC------SRKR 469
Query: 137 SKPPALYLTHSPLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLSRRSG 184
+PP +P + +A P EG T TP + G
Sbjct: 470 GRPPL-----TPSQRAEREAARAGP-------EGTSPPTPTPSTATGG 505
Score = 30.8 bits (68), Expect = 0.84
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 90 PHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYSPLSLPLSKPPALYLTHSPL 149
P PPL PPA P PP P P+ S P P L P P+S PP P
Sbjct: 402 PPPPLTPPA-PSPPPPLPPPSTS-----PPPPLC------PPPPPPVSPPPLPSPPPPPA 449
Query: 150 RHQSTQAQVP 159
+ + ++ P
Sbjct: 450 QEEQEESPPP 459
Score = 30.4 bits (67), Expect = 1.1
Identities = 39/168 (23%), Positives = 56/168 (33%), Gaps = 33/168 (19%)
Query: 5 PSGSAECQRGRTGPKAGWQLLPTARSPAQHPSE--------STSVLLNWVIRALGPLVPP 56
PS AE + R GP+ PT + P E ST+ L N + + + P+V
Sbjct: 476 PSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTVAPKSTTFLKN-IRQFIMPVVSA 534
Query: 57 TEGGLWSDQVSWPLWEDVKTPE---PGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSS 113
+ +KTP +P P P L+PP PP+ V S
Sbjct: 535 RSSRV------------IKTPRRFMDEDPPKPPKVEVSPVLRPPITTSPPVPQEPAPVPS 582
Query: 114 AHSFPAPRLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQVPAP 161
P P +PL + L R S ++P P
Sbjct: 583 PPRAPTP---------PSTPVPLPEKRRSILREPTFRWTSLTRELPPP 621
Score = 29.3 bits (64), Expect = 2.4
Identities = 39/142 (27%), Positives = 51/142 (35%), Gaps = 16/142 (11%)
Query: 51 GPLVPPTEGGLWSDQVSWPLWEDVKTPEPG-------EPGSPLPASPH-PPLQPPAFPDP 102
G PP ++ P + + P G PGSP + H P + P FP P
Sbjct: 1850 GSAPPPAPRSFSGARIKVPNYSPSRRPLGGVSFGPLPSPGSPSSLTHHIPTVGDPDFPAP 1909
Query: 103 PIRSPDPAVSSAHSFP----APRLAWSCVLYSPLSLPLSKPPALYLTHSPLRHQSTQAQV 158
P RS P+ + P +P L S L P P S AL T L
Sbjct: 1910 PRRSRRPSPLAPRPPPSRWASPPLKTSPQLRVP--PPTSVVTALTPTSGELAPPGPAPSP 1967
Query: 159 PAPHLYSQTWEGDDMKTQTPLS 180
P P +E DM+ + LS
Sbjct: 1968 PPPEDLGPDFE--DMEVVSGLS 1987
>gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform 3
[Homo sapiens]
Length = 462
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 8/111 (7%)
Query: 77 PEPGEPGSPLPASPHPPLQPPA------FPDPPIRSPDPAVSSAHSFPAPRLAWSCVLYS 130
P P P PL +S P PP P PP P AV + P P L + +
Sbjct: 230 PPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIP-PALHLNPAFFP 288
Query: 131 PLSLPLSKPPALYLTHS-PLRHQSTQAQVPAPHLYSQTWEGDDMKTQTPLS 180
P + + PP Y+ S P H ++ P P S+ D MK +S
Sbjct: 289 PPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAIS 339
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,295,317
Number of Sequences: 37866
Number of extensions: 837146
Number of successful extensions: 10512
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 677
Number of HSP's that attempted gapping in prelim test: 5602
Number of HSP's gapped (non-prelim): 3739
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.