Guide to the Human Genome
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Name: LOC653073 Sequence: fasta or formatted (602aa) NCBI GI: 169208014
Description:

PREDICTED: Golgin subfamily A member 8-like protein 3 isoform 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [632aa] PREDICTED: Golgin subfamily A member 8-like protein 3 isoform 1
alt prot [580aa] PREDICTED: Golgin subfamily A member 8-like protein 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         52           3
 C cysteine            1.8         11           2
 D aspartate           2.7         16           1
 E glutamate          11.6         70           3
 F phenylalanine       1.3          8           1
 G glycine             5.3         32           3
 H histidine           4.0         24           2
 I isoleucine          2.0         12           1
 K lysine              9.8         59           3
 L leucine            10.0         60           2
 M methionine          1.5          9           1
 N asparagine          4.3         26           2
 P proline             5.0         30           2
 Q glutamine           9.1         55           2
 R arginine            6.6         40           4
 S serine              7.5         45           3
 T threonine           2.7         16           1
 V valine              4.0         24           2
 W tryptophan          1.0          6           1
 Y tyrosine            1.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: Golgin subfamily A member 8-like protein... 
LOC728498             0.977   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.966   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.960   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.899   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728080             0.884   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.884   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.881   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.876   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.872   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653720             0.866   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.865   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.828   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.816   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.809   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728080             0.803   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.803   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.800   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.790   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653061             0.776   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8A               0.674   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.673   golgi autoantigen, golgin subfamily a, 8B 
LOC390561             0.658   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.648   PREDICTED: similar to hect domain and RLD 2 
LOC653061             0.647   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.642   PREDICTED: similar to hect domain and RLD 2 
GOLGA8G               0.471   golgi autoantigen, golgin subfamily a, 8G 
GOLGA8E               0.463   golgi autoantigen, golgin subfamily a, 8E 
LOC100292334          0.336   PREDICTED: similar to GOLGA8B protein, partial [Hom...
GOLGA6                0.330   golgi autoantigen, golgin subfamily a, 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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