Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GOLGA8G Sequence: fasta or formatted (434aa) NCBI GI: 60218910
Description:

golgi autoantigen, golgin subfamily a, 8G

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         35           2
 C cysteine            1.4          6           2
 D aspartate           3.5         15           1
 E glutamate          14.1         61           2
 F phenylalanine       1.6          7           2
 G glycine             8.1         35           3
 H histidine           3.9         17           2
 I isoleucine          1.2          5           1
 K lysine              7.4         32           2
 L leucine            10.6         46           2
 M methionine          1.8          8           1
 N asparagine          2.1          9           2
 P proline             6.7         29           2
 Q glutamine           9.7         42           2
 R arginine            6.0         26           4
 S serine              5.5         24           1
 T threonine           1.6          7           1
 V valine              4.4         19           1
 W tryptophan          0.9          4           1
 Y tyrosine            1.6          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi autoantigen, golgin subfamily a, 8G 
GOLGA8E               0.963   golgi autoantigen, golgin subfamily a, 8E 
LOC653061             0.823   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.767   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.756   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.750   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.742   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.741   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.739   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.733   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.721   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653061             0.694   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.687   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8A               0.669   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.667   golgi autoantigen, golgin subfamily a, 8B 
LOC653073             0.664   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.660   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.657   PREDICTED: similar to hect domain and RLD 2 
LOC653073             0.650   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.644   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.635   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.635   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.634   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.632   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.618   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC390561             0.537   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.534   PREDICTED: similar to hect domain and RLD 2 
LOC100292334          0.491   PREDICTED: similar to GOLGA8B protein, partial [Hom...
LOC653061             0.434   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA6B               0.417   golgi autoantigen, golgin subfamily a, 6B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press