Guide to the Human Genome
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Name: LOC728498 Sequence: fasta or formatted (602aa) NCBI GI: 239745132
Description:

PREDICTED: similar to Golgin subfamily A member 8-like protein 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [632aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 1 ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         53           3
 C cysteine            2.2         13           2
 D aspartate           3.0         18           1
 E glutamate          11.3         68           3
 F phenylalanine       1.0          6           1
 G glycine             5.5         33           3
 H histidine           3.8         23           2
 I isoleucine          1.8         11           1
 K lysine             10.0         60           3
 L leucine            10.3         62           2
 M methionine          1.5          9           1
 N asparagine          4.2         25           2
 P proline             5.0         30           2
 Q glutamine           9.3         56           2
 R arginine            6.3         38           4
 S serine              7.3         44           3
 T threonine           2.7         16           1
 V valine              4.2         25           2
 W tryptophan          1.0          6           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Golgin subfamily A member 8-l... 
LOC653073             0.977   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.966   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.948   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.899   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.884   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.884   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.881   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.876   PREDICTED: Golgin subfamily A member 8-like protein...
LOC643699             0.872   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653125             0.865   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.854   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.824   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.813   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.803   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.803   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.800   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.790   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.786   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653061             0.773   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8A               0.670   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.669   golgi autoantigen, golgin subfamily a, 8B 
LOC390561             0.658   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.649   PREDICTED: similar to hect domain and RLD 2 
LOC653061             0.645   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.643   PREDICTED: similar to hect domain and RLD 2 
GOLGA8G               0.467   golgi autoantigen, golgin subfamily a, 8G 
GOLGA8E               0.459   golgi autoantigen, golgin subfamily a, 8E 
LOC100292334          0.335   PREDICTED: similar to GOLGA8B protein, partial [Hom...
GOLGA6                0.325   golgi autoantigen, golgin subfamily a, 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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