Guide to the Human Genome
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Name: LOC653125 Sequence: fasta or formatted (601aa) NCBI GI: 169208036
Description:

PREDICTED: similar to Golgin subfamily A member 8-like protein 1 isoform 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [630aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 1 ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         52           3
 C cysteine            1.7         10           2
 D aspartate           3.0         18           1
 E glutamate          11.5         69           3
 F phenylalanine       1.2          7           1
 G glycine             5.3         32           3
 H histidine           3.8         23           2
 I isoleucine          2.0         12           1
 K lysine             10.0         60           3
 L leucine            10.1         61           2
 M methionine          1.5          9           1
 N asparagine          4.2         25           2
 P proline             5.2         31           2
 Q glutamine           9.2         55           2
 R arginine            6.7         40           4
 S serine              7.3         44           3
 T threonine           2.7         16           1
 V valine              4.0         24           2
 W tryptophan          1.0          6           1
 Y tyrosine            1.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Golgin subfamily A member 8-l... 
LOC728498             0.969   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.969   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.946   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.898   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.882   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.882   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.878   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.869   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC728498             0.868   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.868   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.850   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.815   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.804   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.800   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.800   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.796   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.786   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.778   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653061             0.764   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8A               0.668   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.667   golgi autoantigen, golgin subfamily a, 8B 
LOC653061             0.647   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.645   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.636   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.630   PREDICTED: similar to hect domain and RLD 2 
GOLGA8G               0.461   golgi autoantigen, golgin subfamily a, 8G 
GOLGA8E               0.453   golgi autoantigen, golgin subfamily a, 8E 
GOLGA6                0.332   golgi autoantigen, golgin subfamily a, 6 
GOLGA6C               0.331   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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