Guide to the Human Genome
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Name: LOC653125 Sequence: fasta or formatted (630aa) NCBI GI: 239745147
Description:

PREDICTED: similar to Golgin subfamily A member 8-like protein 1 isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [601aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 1 ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         55           3
 C cysteine            1.3          8           2
 D aspartate           3.3         21           1
 E glutamate          12.1         76           3
 F phenylalanine       1.3          8           1
 G glycine             5.2         33           3
 H histidine           3.8         24           2
 I isoleucine          1.9         12           1
 K lysine              9.4         59           3
 L leucine            10.6         67           2
 M methionine          1.9         12           1
 N asparagine          4.0         25           2
 P proline             5.1         32           2
 Q glutamine           9.5         60           2
 R arginine            6.7         42           4
 S serine              6.8         43           2
 T threonine           2.7         17           1
 V valine              3.8         24           2
 W tryptophan          1.0          6           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Golgin subfamily A member 8-l... 
LOC653073             0.963   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.961   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.946   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.900   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.896   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.895   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.883   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.861   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.860   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.830   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.830   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.815   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.799   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.761   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.761   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.758   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.748   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC390561             0.718   PREDICTED: similar to hect domain and RLD 2 
LOC653061             0.718   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.712   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8A               0.596   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.595   golgi autoantigen, golgin subfamily a, 8B 
LOC390561             0.540   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.538   PREDICTED: similar to hect domain and RLD 2 
GOLGA8E               0.519   golgi autoantigen, golgin subfamily a, 8E 
LOC653061             0.519   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8G               0.510   golgi autoantigen, golgin subfamily a, 8G 
GOLGA6                0.351   golgi autoantigen, golgin subfamily a, 6 
GOLGA6C               0.350   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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