Guide to the Human Genome
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Name: LOC728498 Sequence: fasta or formatted (632aa) NCBI GI: 239745130
Description:

PREDICTED: similar to Golgin subfamily A member 8-like protein 1 isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [602aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         56           3
 C cysteine            1.7         11           2
 D aspartate           3.3         21           1
 E glutamate          11.9         75           3
 F phenylalanine       1.1          7           1
 G glycine             5.7         36           3
 H histidine           3.8         24           2
 I isoleucine          1.7         11           1
 K lysine              9.3         59           3
 L leucine            10.6         67           2
 M methionine          1.9         12           1
 N asparagine          4.0         25           2
 P proline             5.1         32           2
 Q glutamine           9.5         60           2
 R arginine            6.3         40           4
 S serine              6.8         43           2
 T threonine           2.7         17           1
 V valine              4.0         25           2
 W tryptophan          0.9          6           1
 Y tyrosine            0.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Golgin subfamily A member 8-l... 
LOC653073             0.975   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.956   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.955   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.909   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.904   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.900   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.894   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.873   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.857   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.835   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.825   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.815   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.811   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.762   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.762   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.759   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.749   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC390561             0.735   PREDICTED: similar to hect domain and RLD 2 
LOC653061             0.727   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.718   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8A               0.599   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.598   golgi autoantigen, golgin subfamily a, 8B 
LOC390561             0.552   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.550   PREDICTED: similar to hect domain and RLD 2 
GOLGA8E               0.529   golgi autoantigen, golgin subfamily a, 8E 
LOC653061             0.521   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8G               0.519   golgi autoantigen, golgin subfamily a, 8G 
GOLGA6                0.352   golgi autoantigen, golgin subfamily a, 6 
GOLGA6C               0.350   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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