Guide to the Human Genome
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Name: GOLGA8E Sequence: fasta or formatted (430aa) NCBI GI: 194578896
Description:

golgi autoantigen, golgin subfamily a, 8E

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         36           2
 C cysteine            1.4          6           2
 D aspartate           3.3         14           1
 E glutamate          14.4         62           2
 F phenylalanine       1.6          7           2
 G glycine             7.9         34           3
 H histidine           4.2         18           2
 I isoleucine          0.7          3           1
 K lysine              6.7         29           2
 L leucine            10.7         46           2
 M methionine          2.1          9           1
 N asparagine          2.1          9           2
 P proline             6.5         28           2
 Q glutamine           9.5         41           2
 R arginine            6.3         27           4
 S serine              5.6         24           1
 T threonine           1.6          7           1
 V valine              4.4         19           1
 W tryptophan          0.9          4           1
 Y tyrosine            1.6          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi autoantigen, golgin subfamily a, 8E 
GOLGA8G               0.972   golgi autoantigen, golgin subfamily a, 8G 
LOC653061             0.829   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.788   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.779   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.773   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.767   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.764   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.762   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.754   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.744   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653061             0.697   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.696   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.681   PREDICTED: Golgin subfamily A member 8-like protein...
GOLGA8A               0.674   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.671   golgi autoantigen, golgin subfamily a, 8B 
LOC390561             0.658   PREDICTED: similar to hect domain and RLD 2 
LOC653720             0.658   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.645   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.640   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.633   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.633   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.630   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.629   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.616   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC390561             0.537   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.535   PREDICTED: similar to hect domain and RLD 2 
LOC100292334          0.495   PREDICTED: similar to GOLGA8B protein, partial [Hom...
LOC653061             0.446   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA6B               0.441   golgi autoantigen, golgin subfamily a, 6B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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