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Search of human proteins with 169204294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens]
(301 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens] 620 e-178
gi|169205218 PREDICTED: similar to hCG2045644 [Homo sapiens] 617 e-177
gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens] 556 e-159
gi|169161400 PREDICTED: hypothetical protein [Homo sapiens] 37 0.028
gi|239741286 PREDICTED: hypothetical protein [Homo sapiens] 37 0.028
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 36 0.036
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 36 0.048
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 36 0.048
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 35 0.062
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.081
gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo ... 35 0.11
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 35 0.11
gi|11415052 retinoid X receptor, beta [Homo sapiens] 34 0.14
gi|7019535 B-cell linker isoform 1 [Homo sapiens] 34 0.14
gi|41281612 zinc finger protein 828 [Homo sapiens] 34 0.14
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 34 0.18
gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain c... 34 0.18
gi|239754052 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 33 0.24
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|148612825 Rap GTPase interactor [Homo sapiens] 33 0.24
gi|110832843 TBP-associated factor 4 [Homo sapiens] 33 0.24
gi|38683851 round spermatid basic protein 1 [Homo sapiens] 33 0.24
gi|31543559 radial spoke 3 homolog [Homo sapiens] 33 0.31
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 33 0.31
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens] 33 0.31
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 33 0.31
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens] 33 0.31
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 33 0.31
gi|239742598 PREDICTED: hypothetical protein [Homo sapiens] 33 0.31
>gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 301
Score = 620 bits (1599), Expect = e-178
Identities = 301/301 (100%), Positives = 301/301 (100%)
Query: 1 MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL 60
MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL
Sbjct: 1 MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL 60
Query: 61 LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL 120
LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL
Sbjct: 61 LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL 120
Query: 121 ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARA 180
ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARA
Sbjct: 121 ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARA 180
Query: 181 RTGSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHPAPR 240
RTGSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHPAPR
Sbjct: 181 RTGSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHPAPR 240
Query: 241 SPSRPLITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTASPLG 300
SPSRPLITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTASPLG
Sbjct: 241 SPSRPLITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTASPLG 300
Query: 301 R 301
R
Sbjct: 301 R 301
>gi|169205218 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 301
Score = 617 bits (1592), Expect = e-177
Identities = 300/301 (99%), Positives = 300/301 (99%)
Query: 1 MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL 60
MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL
Sbjct: 1 MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL 60
Query: 61 LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL 120
LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL
Sbjct: 61 LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL 120
Query: 121 ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARA 180
ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARA
Sbjct: 121 ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARA 180
Query: 181 RTGSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHPAPR 240
RTGSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHPAPR
Sbjct: 181 RTGSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHPAPR 240
Query: 241 SPSRPLITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTASPLG 300
SPSRP ITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTASPLG
Sbjct: 241 SPSRPPITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTASPLG 300
Query: 301 R 301
R
Sbjct: 301 R 301
>gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 363
Score = 556 bits (1434), Expect = e-159
Identities = 287/364 (78%), Positives = 290/364 (79%), Gaps = 64/364 (17%)
Query: 1 MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL 60
MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL
Sbjct: 1 MPWMLPHQPTVSGAPVEFDWTGSSFYSLSDLLMHTAKGSKSSASEKLNLPRLLGSRAYCL 60
Query: 61 LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL 120
LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL
Sbjct: 61 LGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLL 120
Query: 121 ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCI--------- 171
ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWC+
Sbjct: 121 ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCMYLWRSSPLG 180
Query: 172 ------------------------------------AAAAGRARARTGSPSSDVAA---- 191
AGR R + SP + AA
Sbjct: 181 SLITGNNQRFRDHPGENRNIYIASIPPLGVPQDMPSPGLAGR-RGQCASPGTSRAAAAGR 239
Query: 192 --------------AAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHP 237
AAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHP
Sbjct: 240 ARARTGSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFFSRQPLHP 299
Query: 238 APRSPSRPLITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTAS 297
APRSPSRP ITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTAS
Sbjct: 300 APRSPSRPPITQSVEKQKATFTFLHRNNGRTQGVAFWSQGSSGCPAPLHPHSPLLLPTAS 359
Query: 298 PLGR 301
PLGR
Sbjct: 360 PLGR 363
>gi|169161400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 36.6 bits (83), Expect = 0.028
Identities = 43/141 (30%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 68 PDELNGPRASPHAGVI--LGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRR 125
P E NG +A+P AG + LG R PS +S R R + ER P PG+L
Sbjct: 51 PGEQNGRKATPQAGALGALGIRGIPS--LCQSEGTRWSRRGRRWAERCP-PGVLGAGRSL 107
Query: 126 RDSRRHVTSSQPPL-----PATQIRPRNPCPAG------RAGGHVAGAPVPAAPWCIAAA 174
R R + S PPL P +PR+ AG +A G G A P +
Sbjct: 108 RAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTQEACLQASGTTRGWKYHALPLRLDPR 167
Query: 175 AGRARARTGSPSSDVAAAAGR 195
+G A + + S GR
Sbjct: 168 SGHAGSALKAGSCPRLGGGGR 188
>gi|239741286 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 36.6 bits (83), Expect = 0.028
Identities = 43/141 (30%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 68 PDELNGPRASPHAGVI--LGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRR 125
P E NG +A+P AG + LG R PS +S R R + ER P PG+L
Sbjct: 51 PGEQNGRKATPQAGALGALGIRGIPS--LCQSEGTRWSRRGRRWAERCP-PGVLGAGRSL 107
Query: 126 RDSRRHVTSSQPPL-----PATQIRPRNPCPAG------RAGGHVAGAPVPAAPWCIAAA 174
R R + S PPL P +PR+ AG +A G G A P +
Sbjct: 108 RAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPR 167
Query: 175 AGRARARTGSPSSDVAAAAGR 195
+G A + + S GR
Sbjct: 168 SGHAGSALKAGSCPRLGGGGR 188
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 36.2 bits (82), Expect = 0.036
Identities = 42/138 (30%), Positives = 50/138 (36%), Gaps = 22/138 (15%)
Query: 111 ERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWC 170
+RP PGL L +G R S PP P P PC H+A P P AP
Sbjct: 1551 DRPASPGLALFNGSGRASPPSTPPPPPPPPGPPPAPYRPC------AHLAFPPEP-APVN 1603
Query: 171 IAAAAGRARARTGSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNERIASCFF 230
A A A P + A AG + Y R +A + +
Sbjct: 1604 AGKAGPSAEAPKVHPKPNSAPVAGPCSSFPKIPYSPVKATRADARKAGS----------- 1652
Query: 231 SRQPLHPAPRSP--SRPL 246
S P PAP SP SRPL
Sbjct: 1653 SASP--PAPYSPPSSRPL 1668
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 35.8 bits (81), Expect = 0.048
Identities = 36/100 (36%), Positives = 39/100 (39%), Gaps = 21/100 (21%)
Query: 77 SPHAGVILG--------RRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDS 128
SP AG + G +R A R R R RRL P PG RD+
Sbjct: 75 SPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRLPGSAAAPAPG--------RDA 126
Query: 129 RRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAP 168
R PP P RPR P PAG AGG AP AP
Sbjct: 127 LR----LPPPPPPPPERPRLP-PAGLAGGPADSAPPSPAP 161
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 35.8 bits (81), Expect = 0.048
Identities = 40/144 (27%), Positives = 57/144 (39%), Gaps = 13/144 (9%)
Query: 66 INPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRR 125
+ P + R SP G + R S +L L++ +RPP P S +
Sbjct: 452 VPPPQGGSGRGSPSGGSTA--EASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRRTHSLHQ 509
Query: 126 RD-SRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGA----PVPAAPWCIAAAAG---- 176
R + PP P + +P+ P P G AGA P PA W + G
Sbjct: 510 RGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRR 569
Query: 177 --RARARTGSPSSDVAAAAGRITL 198
R+ RT SPSS ++ +G TL
Sbjct: 570 PPRSPERTLSPSSGYSSQSGTPTL 593
Score = 30.4 bits (67), Expect = 2.0
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 56 RAYCLLGTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPR 115
+A L +E ++ + NGP P A R P A ++ + R Q ERP
Sbjct: 937 KACSLAASEGLSSAQPNGP---PEA-----EPRPPQSPASTASFIFSKGSRKLQLERPVS 988
Query: 116 PGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAP 168
P + R + S Q P A + P+ P P R G P PA+P
Sbjct: 989 PETQADLQRNLVAELRSISEQRPPQAPKKSPKAPPPVARKPS--VGVPPPASP 1039
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 35.4 bits (80), Expect = 0.062
Identities = 38/127 (29%), Positives = 50/127 (39%), Gaps = 15/127 (11%)
Query: 90 PSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNP 149
P+ R+ + +P QQ +R P G +G+RR SR +SS Q R
Sbjct: 77 PTSRGHRTEKRKP-----QQPQRRPAGG----TGQRRGSR---SSSSADQQGAQDREEEA 124
Query: 150 C--PAGRAGGHVAGAPVPAAPWC-IAAAAGRARARTGSPSSDVAAAAGRITLLALCWYPF 206
PA + GH P P C AA G+ R SPS+D A R P
Sbjct: 125 AAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQRRGSGCSPSADQQRAQDREEEATAAPVPT 184
Query: 207 ETGLRRE 213
+G R E
Sbjct: 185 SSGHRTE 191
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.0 bits (79), Expect = 0.081
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 14/102 (13%)
Query: 85 GRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQI 144
GR R P R + RPG R + +R GR R +RR + S+ P +
Sbjct: 523 GRSRSPQRRGRSRSPQRPGWSRSRNTQR---------RGRSRSARRGRSHSRSPATRGRS 573
Query: 145 RPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARARTGSPS 186
R R P GR+ PA + R R+R+ +P+
Sbjct: 574 RSRTPARRGRSRSR-----TPARRRSRSRTPTRRRSRSRTPA 610
Score = 34.3 bits (77), Expect = 0.14
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 84 LGRRRRPSHEARRSARLRPGLRRLQQRERPP---RPGLLLESGRRRDSRRHVTSSQPPLP 140
+GR R P+ R +R R +R R R P R GR R +R S P P
Sbjct: 481 MGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRP 540
Query: 141 ATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARART 182
R RN GR+ G +P A GR+R+RT
Sbjct: 541 GWS-RSRNTQRRGRSRSARRGRSHSRSP----ATRGRSRSRT 577
Score = 32.0 bits (71), Expect = 0.69
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Query: 87 RRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRP 146
R R ARR +R R RR + P R G S R +RR + P + R
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPARRG---RSRSRTPARRRSRTRSP----VRRRS 635
Query: 147 RNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARARTGSPS 186
R+ PA R+G + P A R R+R+ +P+
Sbjct: 636 RSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPA 675
Score = 31.6 bits (70), Expect = 0.90
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 11/124 (8%)
Query: 37 KGSKSSASEKLNLPRLL----GSRAYCLLGTEHINPDELNGPRASPHAG--VILGRRRRP 90
+GS S+ S + P+ GSR+ T+ P R+SP L RR R
Sbjct: 1650 EGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRS 1709
Query: 91 SHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNPC 150
+ + + P R P P + + R SRR ++S P T R R+P
Sbjct: 1710 ASSSPETRSRTPPRHRRSPSVSSPEP-----AEKSRSSRRRRSASSPRTKTTSRRGRSPS 1764
Query: 151 PAGR 154
P R
Sbjct: 1765 PKPR 1768
Score = 30.4 bits (67), Expect = 2.0
Identities = 41/158 (25%), Positives = 54/158 (34%), Gaps = 13/158 (8%)
Query: 87 RRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRP 146
R R S RRS + R + R R P R +RR S PP+ + R
Sbjct: 1901 RSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRS 1960
Query: 147 RNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARARTGSPSSDVAAAAGRITLLALCWYPF 206
R P P R +P+ + + R R+ S +S V R +
Sbjct: 1961 RTP-PVTRRRSRSRTSPITRRR-SRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVT---- 2014
Query: 207 ETGLRREALEVPAVVNERIASCFFSRQPLHPAPRSPSR 244
RR P + R SR PL P RS SR
Sbjct: 2015 ---RRRSRSRTPPAIRRRSR----SRTPLLPRKRSRSR 2045
Score = 28.1 bits (61), Expect = 9.9
Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 52 LLGSRAYCLLGTEHINPDELNGPRASPH-AGVILGRRRRP-SHEARRSARLRPGLR-RLQ 108
+ GSR L P L R +P +G L R P S R S R P L R +
Sbjct: 2352 IAGSRTAAALA-----PASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRAR 2406
Query: 109 QRERPPRPG---LLLESGRRRDSRRHVTSSQPPLPATQIRPRNPCPA 152
R P P + E SR SQ LP Q +PR+P P+
Sbjct: 2407 SRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPS 2453
>gi|239742065 PREDICTED: hypothetical protein XP_002342402 [Homo
sapiens]
Length = 381
Score = 34.7 bits (78), Expect = 0.11
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 22/132 (16%)
Query: 87 RRRPSHEARRSARLRPGLRRLQQRERP------PRPGLLLESGRRRD----SRRHVTSSQ 136
R R + RR +R PG R LQ+ R + LLL + + + R + +
Sbjct: 209 RSRQLRQHRRESRPWPGRRGLQEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARE 268
Query: 137 PPLPATQI-------RPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARARTGS----- 184
LP ++I R R+P GRA H G A C A + A A TG+
Sbjct: 269 TGLPESRIQIWFQNRRARHPGQGGRAPAHAGGLCNAAPSGCHPAPSWVACAHTGAWGTGL 328
Query: 185 PSSDVAAAAGRI 196
P+S V A G +
Sbjct: 329 PASHVPCAPGAL 340
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 34.7 bits (78), Expect = 0.11
Identities = 40/137 (29%), Positives = 53/137 (38%), Gaps = 13/137 (9%)
Query: 72 NGPRASPHAG---VILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESG---RR 125
NG SP AG ++ G P E + S GLR + ERPP G G +
Sbjct: 1005 NGELRSPEAGEKVLVNGGLTPPKSEDKVSEN--GGLRFPRNTERPPETGPWRAPGPWEKT 1062
Query: 126 RDSRRHVTSSQPPLPATQIRPRNPCPAG----RAGGHVAGAPVPAAPWCIAAAAGRARAR 181
+S + P P T + R P P+ R GG A P+ AP G R
Sbjct: 1063 PESWGPAPTIGEPAPETSLE-RAPAPSAVVSSRNGGETAPGPLGPAPKNGTLEPGTERRA 1121
Query: 182 TGSPSSDVAAAAGRITL 198
+ + A AGR+ L
Sbjct: 1122 PETGGAPRAPGAGRLDL 1138
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 34.3 bits (77), Expect = 0.14
Identities = 44/137 (32%), Positives = 53/137 (38%), Gaps = 22/137 (16%)
Query: 73 GPRASPHAGVILG-RRRRP--SHEARRSARLRPGLRRLQQRERPPRPGLLLESGRR---- 125
G R H GV RRRRP A +A + G +Q+ P PG E+GR
Sbjct: 23 GVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAGG----EQQTPEPEPG---EAGRDGMGD 75
Query: 126 --RDSRRHVTSSQPPLPATQIRPRNPCP------AGRAGGHVAGAPVPAAPWCIAAAAGR 177
RDSR +SS PLP P P P A GG A P P P + +
Sbjct: 76 SGRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPV 135
Query: 178 ARARTGSPSSDVAAAAG 194
+ GSP A G
Sbjct: 136 ISSSMGSPGLPPPAPPG 152
>gi|7019535 B-cell linker isoform 1 [Homo sapiens]
Length = 456
Score = 34.3 bits (77), Expect = 0.14
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 23/101 (22%)
Query: 90 PSHEARRSARLRPGLRRLQQRERPPRPGLLLESGR--------RRDSRRHVT--SSQPPL 139
PS +AR ++ L P L LQ+ + PP+P LLE ++ H T SS PP
Sbjct: 143 PSEKARLTSTL-PALTALQKPQVPPKPKGLLEDEADYVVPVEDNDENYIHPTESSSPPPE 201
Query: 140 PATQI----RPRNPCPA---GRAGGHVAGA-----PVPAAP 168
A + +P + PA G A G +GA P PAAP
Sbjct: 202 KAPMVNRSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAP 242
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 34.3 bits (77), Expect = 0.14
Identities = 32/130 (24%), Positives = 40/130 (30%), Gaps = 26/130 (20%)
Query: 68 PDELNGPRASPHAGVILGRRRRP-------SHEARRSARLRPGLRRLQQRERPPRPGLLL 120
P+ L P AS +L P S E+R+SAR R P P
Sbjct: 234 PETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPW--- 290
Query: 121 ESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARA 180
P PA PR P PA G G P PW +A
Sbjct: 291 ----------------KPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPW 334
Query: 181 RTGSPSSDVA 190
+ P+ V+
Sbjct: 335 KPAKPAPSVS 344
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 33.9 bits (76), Expect = 0.18
Identities = 63/219 (28%), Positives = 75/219 (34%), Gaps = 33/219 (15%)
Query: 62 GTEHINPDELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLE 121
GT P G R S V G+ + EA + + L G RR P P +
Sbjct: 113 GTTRPGPLGQKGLRISAEETVARGK----ATEAPKRSALSAGARRDTSGPTPGTPSPAMA 168
Query: 122 SGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGR-----AGGHVAGAPVPAAPWCIAAAAG 176
R SR T P PA RPR P R A H P PAA +A G
Sbjct: 169 ----RRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGG 224
Query: 177 RARART----------GSPSSDVAAAAGRITLLALCWYPFETGLRREALEVPAVVNER-- 224
R + SP+ +A G A P GL +AL P V R
Sbjct: 225 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL--QALRPPQVTPPRKD 282
Query: 225 --IASCFFSRQPL----HPAPRSPSRPLITQSVEKQKAT 257
A S PL AP SPS P Q++ AT
Sbjct: 283 AAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPAT 321
>gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing A [Homo sapiens]
Length = 312
Score = 33.9 bits (76), Expect = 0.18
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 70 ELNGPRASPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSR 129
+L+ PR SP R R P +R R P RR + R + PR R RD R
Sbjct: 219 DLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPR----RHRSRSRD-R 273
Query: 130 RHVTSSQPP 138
RH + S+ P
Sbjct: 274 RHRSRSKSP 282
>gi|239754052 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 33.5 bits (75), Expect = 0.24
Identities = 38/123 (30%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 68 PDELNGPRA-SPHAGVILGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRR 126
P GPR S AG++L R P+ +R +R G R R PG + RR
Sbjct: 180 PPTAGGPRRRSVSAGLVLAGARGPARPSRPHPAVRAGERERTHLRR--APGAAGRARERR 237
Query: 127 DSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARARTGSPS 186
SR + S + L + ++RP A G +P AP AGR R PS
Sbjct: 238 RSRANEWSRR--LLSGELRPEPDRTARGCQGEC--GCLPLAPDARLLVAGRPRPTV--PS 291
Query: 187 SDV 189
DV
Sbjct: 292 DDV 294
>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
sapiens]
Length = 536
Score = 33.5 bits (75), Expect = 0.24
Identities = 70/273 (25%), Positives = 98/273 (35%), Gaps = 46/273 (16%)
Query: 35 TAKGSKSSASEKLNLPRLLGSRAYCLLGTEHINPDELNGPRASPHAGVILGRRRRPSHEA 94
+A+GS+ S + P SR PD G A H LGR RRP
Sbjct: 88 SARGSEGRPSSRQARPLRRPSRR-ARRRAPRCAPDRRCGDSAPRHRPRALGRGRRP---- 142
Query: 95 RRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPR------- 147
R R LR+L RP P + QP ++ PR
Sbjct: 143 ---LRGRVLLRQLDPFTRPRFPLQFFQG-----------CPQPSRCLGRLEPRRWRGHGL 188
Query: 148 NPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARAR-TGSPSSDVAAAAGRITLLALCWYPF 206
P A G V P PA+P + A R G A AAG+ L L
Sbjct: 189 QPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLP---- 244
Query: 207 ETGLRREALEVPAVVNERIASCFFSRQPLHPAPRSPSRPLITQSVEKQKATFTFLH--RN 264
G R AV R+ S F+ +P P +P+ +++++++ FT + R
Sbjct: 245 GRGRDRAVEAGDAVAQVRVQSHSFAPRPRAPLAVAPA------ALQRRESEFTLMRMCRE 298
Query: 265 NGRTQGVAF-WSQGSSGC------PAPLHPHSP 290
+G++F S C PAPL+P P
Sbjct: 299 EQALRGLSFGLSLVQVACTPPACSPAPLNPWEP 331
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 33.5 bits (75), Expect = 0.24
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 19/118 (16%)
Query: 85 GRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQI 144
G R RP+ AR R G R PR G + R +S++ PL
Sbjct: 64 GARERPAEGARGPRAARGGARAAPMPSSAPR-------GPTEPALRRPSSAERPLAQA-- 114
Query: 145 RPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARARTGSP---SSDVAAAAGRITLL 199
P + GRA G + A+P + A G+ R R G P DV R+ LL
Sbjct: 115 -PSSSASVGRAPGAM------ASPSRSSEATGKPRGRDGRPRREEDDVPPEEKRLRLL 165
>gi|148612825 Rap GTPase interactor [Homo sapiens]
Length = 1075
Score = 33.5 bits (75), Expect = 0.24
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 103 GLRRLQQRERPPRPGLLLESGRRRDSRRHVT-SSQPPLPATQIRPRNPCPAGRAGGHVAG 161
GLR P RPG + HV P+ + PR+P PA R
Sbjct: 809 GLRSRASPGSPGRPGSGASQPVCPEGMHHVVLDGHLEAPSCPLAPRDPGPAAREVAPERT 868
Query: 162 APVPAAPWCIAAAAGRARARTGS 184
P+ APW A GR +R GS
Sbjct: 869 LPLRGAPWA-QAPPGRQPSRGGS 890
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 33.5 bits (75), Expect = 0.24
Identities = 34/97 (35%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 97 SARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAG 156
+ R RPG QR PP P RR + + P PA ++RP P G AG
Sbjct: 92 AGRARPGGGG-PQRPGPPSP------------RRPLVPAGPAPPAAKLRPP---PEGSAG 135
Query: 157 GHVAGAPVPAAPWCIAAAAGRARARTGSPSSDVAAAA 193
+ APVPAA +AA A A P+ A AA
Sbjct: 136 ---SCAPVPAAA-AVAAGPEPAPAGPAKPAGPAALAA 168
Score = 31.6 bits (70), Expect = 0.90
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 112 RPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCI 171
+P PG ++++ V ++ PP PA P P PA A A P P AP +
Sbjct: 230 KPAAPGTVIQTPP------FVGAAAPPAPAAPSPPAAPAPAAPA---AAPPPPPPAPATL 280
Query: 172 AAAAGR-ARARTGSPSSDVAAAA 193
A G A T +P+ AAA
Sbjct: 281 ARPPGHPAGPPTAAPAVPPPAAA 303
>gi|38683851 round spermatid basic protein 1 [Homo sapiens]
Length = 802
Score = 33.5 bits (75), Expect = 0.24
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 22/103 (21%)
Query: 75 RASPHAGVI---LGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRRRDSRRH 131
+ PHAGV + R+RR S + R RP + PP L RRR SR+H
Sbjct: 73 KEKPHAGVSPRGVKRQRRSSSGGSQEKRGRPS-------QEPP----LAPPHRRRRSRQH 121
Query: 132 -----VTSSQPPLPA---TQIRPRNPCPAGRAGGHVAGAPVPA 166
T++ P +P + P P P+ G AP+PA
Sbjct: 122 PGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPAVAAPLPA 164
>gi|31543559 radial spoke 3 homolog [Homo sapiens]
Length = 560
Score = 33.1 bits (74), Expect = 0.31
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 131 HVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARARTGSPSSDVA 190
++ S PPL + + RNPCP H++G+ AP C A R R GS D+A
Sbjct: 90 NLPSRPPPLLSPLLASRNPCPWHYL--HLSGSHNTLAPTCFKAKLHRKR---GSQPPDMA 144
Query: 191 AA 192
+A
Sbjct: 145 SA 146
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 33.1 bits (74), Expect = 0.31
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 8/86 (9%)
Query: 109 QRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAP 168
Q + PP P +RDS +P P + P +P +A G AP P P
Sbjct: 17 QDQSPPSP--------QRDSGLTPERDRPDWPRSFKPPLSPEKGTKASGPQTSAPSPRDP 68
Query: 169 WCIAAAAGRARARTGSPSSDVAAAAG 194
R R G P+ +V A G
Sbjct: 69 GLHTPPCSPRRGRRGRPTQEVCPAPG 94
>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 33.1 bits (74), Expect = 0.31
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 8/86 (9%)
Query: 109 QRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAP 168
Q + PP P +RDS +P P + P +P +A G AP P P
Sbjct: 17 QDQSPPSP--------QRDSGLTPERDRPDWPRSFKPPLSPEKGTKASGPQTSAPSPRDP 68
Query: 169 WCIAAAAGRARARTGSPSSDVAAAAG 194
R R G P+ +V A G
Sbjct: 69 GLHTPPCSPRRGRRGRPTQEVCPAPG 94
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 33.1 bits (74), Expect = 0.31
Identities = 39/122 (31%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 90 PSHEARRSARLRPGLRRLQQRE----RPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIR 145
P E R SAR G R + R PRP + RR S+ LPA ++
Sbjct: 91 PPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASA---LPAPRLC 147
Query: 146 PRNPCPAGRAGG--HVAGAPVPAAPWCIAAAAGRARARTGSPSSDVAAAAGRITLLALCW 203
P+ P + G G P A AAAA AR G S A AGR LA
Sbjct: 148 PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQ 207
Query: 204 YP 205
P
Sbjct: 208 LP 209
>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 33.1 bits (74), Expect = 0.31
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 8/86 (9%)
Query: 109 QRERPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAP 168
Q + PP P +RDS +P P + P +P +A G AP P P
Sbjct: 17 QDQSPPSP--------QRDSGLTPERDRPDWPRSFKPPLSPEKGTKASGPQTSAPSPRDP 68
Query: 169 WCIAAAAGRARARTGSPSSDVAAAAG 194
R R G P+ +V A G
Sbjct: 69 GLHTPPCSPRRGRRGRPTQEVCPAPG 94
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 33.1 bits (74), Expect = 0.31
Identities = 39/122 (31%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 90 PSHEARRSARLRPGLRRLQQRE----RPPRPGLLLESGRRRDSRRHVTSSQPPLPATQIR 145
P E R SAR G R + R PRP + RR S+ LPA ++
Sbjct: 91 PPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASA---LPAPRLC 147
Query: 146 PRNPCPAGRAGG--HVAGAPVPAAPWCIAAAAGRARARTGSPSSDVAAAAGRITLLALCW 203
P+ P + G G P A AAAA AR G S A AGR LA
Sbjct: 148 PQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQ 207
Query: 204 YP 205
P
Sbjct: 208 LP 209
>gi|239742598 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 33.1 bits (74), Expect = 0.31
Identities = 41/127 (32%), Positives = 49/127 (38%), Gaps = 17/127 (13%)
Query: 68 PDELNGPRA-SPHAGVILGRRRRPSHEARRSARLRPGLR-RLQQRERPPRPGLLLESGRR 125
P GPR S AG++L R P+ +R +R G R R R P G E R
Sbjct: 180 PPTAGGPRRRSVSAGLVLAGARGPARPSRPHPAVRAGERERTHLRRAPGAAGRARERRRS 239
Query: 126 RD---SRRHVTSSQPPLPATQIRPRNPCPAGRAGGHVAGAPVPAAPWCIAAAAGRARART 182
R SRR + P+P R C G G +P AP AGR R
Sbjct: 240 RANEWSRRLLAGDLRPVPG---RTARGC-QGECG------CLPLAPDARLLVAGRPRPTV 289
Query: 183 GSPSSDV 189
PS DV
Sbjct: 290 --PSDDV 294
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,148,672
Number of Sequences: 37866
Number of extensions: 795478
Number of successful extensions: 4318
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 280
Number of HSP's that attempted gapping in prelim test: 4082
Number of HSP's gapped (non-prelim): 502
length of query: 301
length of database: 18,247,518
effective HSP length: 102
effective length of query: 199
effective length of database: 14,385,186
effective search space: 2862652014
effective search space used: 2862652014
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.