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Search of human proteins with 169173182
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
(255 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 541 e-154
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 57 2e-08
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 57 2e-08
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 57 2e-08
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 57 2e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 56 3e-08
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 55 6e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 8e-08
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 54 1e-07
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 54 1e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 54 1e-07
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 54 1e-07
gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Ho... 54 1e-07
gi|112421108 capicua homolog [Homo sapiens] 54 2e-07
gi|19924097 synapsin I isoform Ib [Homo sapiens] 53 2e-07
gi|40787999 single-stranded DNA binding protein 2 [Homo sapiens] 53 2e-07
gi|33286446 opioid growth factor receptor [Homo sapiens] 52 4e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 52 4e-07
gi|150378539 piccolo isoform 1 [Homo sapiens] 52 4e-07
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 52 4e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 52 5e-07
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 52 7e-07
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 52 7e-07
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 51 9e-07
gi|236459851 ubinuclein 2 [Homo sapiens] 51 1e-06
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 51 1e-06
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 51 1e-06
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 50 2e-06
gi|41281612 zinc finger protein 828 [Homo sapiens] 50 2e-06
gi|19924099 synapsin I isoform Ia [Homo sapiens] 50 2e-06
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 541 bits (1393), Expect = e-154
Identities = 255/255 (100%), Positives = 255/255 (100%)
Query: 1 MASQSLYKPVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRP 60
MASQSLYKPVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRP
Sbjct: 1 MASQSLYKPVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRP 60
Query: 61 RPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPA 120
RPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPA
Sbjct: 61 RPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPA 120
Query: 121 HPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQG 180
HPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQG
Sbjct: 121 HPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQG 180
Query: 181 QSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAPWQVT 240
QSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAPWQVT
Sbjct: 181 QSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAPWQVT 240
Query: 241 WGRNAGRRRDSWKAG 255
WGRNAGRRRDSWKAG
Sbjct: 241 WGRNAGRRRDSWKAG 255
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 56.6 bits (135), Expect = 2e-08
Identities = 45/159 (28%), Positives = 57/159 (35%), Gaps = 12/159 (7%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHS 97
PTPT +P EP T + P T + P + P P P T+ A +
Sbjct: 232 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT 291
Query: 98 KMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAP--PRPAHQ 155
K +P P PA TT P+ P P +P P PAP PA
Sbjct: 292 K-------SAPTTPKEPAPTTPKKPAPTT-PKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 343
Query: 156 SPAEEGPRGAAGGGPRTP--PAGRTQGQSGPRESPRASP 192
+P E P P TP PA T + P + SP
Sbjct: 344 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 382
Score = 53.5 bits (127), Expect = 2e-07
Identities = 52/213 (24%), Positives = 72/213 (33%), Gaps = 18/213 (8%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTL--RPRPGTLR 66
P +P P P + E + P PT P AP+ P T P P T +
Sbjct: 311 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 370
Query: 67 APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTT 126
P + P P P T+SA + + + P P+ TT
Sbjct: 371 EPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP--------APTTTKSAPTTPKEPSPTT 422
Query: 127 NPELELPADPAQPDPAPLSRPAPP---RPAHQSPAEEGPRGAAGGGPRTP--PAGRTQGQ 181
E P P +P P +PAP PA +P E P P TP PA T +
Sbjct: 423 TKE-PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 481
Query: 182 SGPRESPRASPGSAAPAMASVRGPARDGATRSE 214
+ P + +P P + P + T E
Sbjct: 482 TAPTTPKKLTP--TTPEKLAPTTPEKPAPTTPE 512
Score = 45.1 bits (105), Expect = 6e-05
Identities = 53/235 (22%), Positives = 75/235 (31%), Gaps = 21/235 (8%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPG-PSPRRAPEP-PLLTLRPRPGTLR 66
P + P P + K P PT P P+P +P P P P T +
Sbjct: 397 PTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPK 456
Query: 67 APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQT- 125
P + P P P + A P + L P P P +
Sbjct: 457 EPAPTTTKKPAPTTPKEPAPTTPKETA-PTTPKKLTPTTPEKLAPTTPEKPAPTTPEELA 515
Query: 126 -TNPELELPADPAQPDPAPLSRPAP---PRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQ 181
T PE P P +P P AP PA +P E P P T
Sbjct: 516 PTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT--------- 566
Query: 182 SGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
P+E+ +P AP +++ PA + P T + ++ +C AP
Sbjct: 567 --PKETAPTTPKGTAP--TTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAP 617
Score = 42.4 bits (98), Expect = 4e-04
Identities = 53/216 (24%), Positives = 69/216 (31%), Gaps = 33/216 (15%)
Query: 38 PTPTAPGPSPRRAPEPPLLTL--RPRPGTLRA--PGNAESPAPRRARPDLGRPWATRSAA 93
P PT P PE P T P P T +A P + PAP P P + A
Sbjct: 506 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP--TTPKEPAPTTPKEPA 563
Query: 94 SPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPA 153
K P T P P P PA + AP + P
Sbjct: 564 PTTPK------------ETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 611
Query: 154 HQSPAEEGPRGAAGGGPRTP-------PAGRTQGQSGP---RESPRASPGSAAP---AMA 200
PA P+G A P+ P PA T + P +E +P AP A
Sbjct: 612 CDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 671
Query: 201 SVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
+ +GP T +P T + P + + P
Sbjct: 672 TTKGPT--STTSDKPAPTTPKETAPTTPKEPAPTTP 705
Score = 40.8 bits (94), Expect = 0.001
Identities = 56/226 (24%), Positives = 78/226 (34%), Gaps = 36/226 (15%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEP-------PLLTLRPR 61
P +P P P A + E A TP P P+ + P P P
Sbjct: 524 PTTPEEPAPTTPKAAAPNTPKEP----APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 579
Query: 62 PGTLR--APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLP 119
P TL+ AP + PAP+ P + + + P G+ P T P
Sbjct: 580 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTA---------PTT--P 628
Query: 120 AHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTP--PAGR 177
PA TT P+ P P P L PAP +P + P+ A P T P
Sbjct: 629 KEPAPTT-PKEPAPTTPKGTAPTTLKEPAPT-----TPKKPAPKELA---PTTTKGPTST 679
Query: 178 TQGQSGPRESPRASPGS-AAPAMASVRGPARDGATRSEPHATEIRT 222
T + P +P + PA + + PA P +E+ T
Sbjct: 680 TSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVST 725
Score = 40.8 bits (94), Expect = 0.001
Identities = 53/216 (24%), Positives = 74/216 (34%), Gaps = 34/216 (15%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAP-GPSPRRAPEP-PLLTLRPRPGTLR 66
P +P +P P + +K S P PT P G +P EP P P P T +
Sbjct: 588 PTTPKKPAPKELAP--TTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK 645
Query: 67 --APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQ 124
AP + PAP + + A + P S +D PA
Sbjct: 646 GTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT----------------SDKPA---- 685
Query: 125 TTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGP 184
T P+ P P +P P P +PA +P P + P T T +S
Sbjct: 686 PTTPKETAPTTPKEPAPT-----TPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 740
Query: 185 RESPRASPGSAAPAMASVRGPARDGA-TRSEPHATE 219
+P S A+ + P G T P AT+
Sbjct: 741 ESTPELSAEPTPKALEN--SPKEPGVPTTKTPAATK 774
Score = 33.9 bits (76), Expect = 0.14
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 113 DPHTDLPAHPAQTTNPE---LELPADPAQP-DPAPLSRPAPPRPAHQSPAEEGPRGAAGG 168
+P P PA TT E + + P P +PAP + + P +P E P
Sbjct: 215 EPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP----TTPKEPAPTTTKEP 270
Query: 169 GPRTP--PAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQ 226
P TP PA T + P + A PA + + PA T EP T + P
Sbjct: 271 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPA--PTTPKEPAPTTPKEPTPT 328
Query: 227 SAR 229
+ +
Sbjct: 329 TPK 331
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 56.6 bits (135), Expect = 2e-08
Identities = 45/159 (28%), Positives = 57/159 (35%), Gaps = 12/159 (7%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHS 97
PTPT +P EP T + P T + P + P P P T+ A +
Sbjct: 273 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT 332
Query: 98 KMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAP--PRPAHQ 155
K +P P PA TT P+ P P +P P PAP PA
Sbjct: 333 K-------SAPTTPKEPAPTTPKKPAPTT-PKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 384
Query: 156 SPAEEGPRGAAGGGPRTP--PAGRTQGQSGPRESPRASP 192
+P E P P TP PA T + P + SP
Sbjct: 385 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 423
Score = 53.5 bits (127), Expect = 2e-07
Identities = 52/213 (24%), Positives = 72/213 (33%), Gaps = 18/213 (8%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTL--RPRPGTLR 66
P +P P P + E + P PT P AP+ P T P P T +
Sbjct: 352 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 411
Query: 67 APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTT 126
P + P P P T+SA + + + P P+ TT
Sbjct: 412 EPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP--------APTTTKSAPTTPKEPSPTT 463
Query: 127 NPELELPADPAQPDPAPLSRPAPP---RPAHQSPAEEGPRGAAGGGPRTP--PAGRTQGQ 181
E P P +P P +PAP PA +P E P P TP PA T +
Sbjct: 464 TKE-PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 522
Query: 182 SGPRESPRASPGSAAPAMASVRGPARDGATRSE 214
+ P + +P P + P + T E
Sbjct: 523 TAPTTPKKLTP--TTPEKLAPTTPEKPAPTTPE 553
Score = 45.1 bits (105), Expect = 6e-05
Identities = 53/235 (22%), Positives = 75/235 (31%), Gaps = 21/235 (8%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPG-PSPRRAPEP-PLLTLRPRPGTLR 66
P + P P + K P PT P P+P +P P P P T +
Sbjct: 438 PTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPK 497
Query: 67 APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQT- 125
P + P P P + A P + L P P P +
Sbjct: 498 EPAPTTTKKPAPTTPKEPAPTTPKETA-PTTPKKLTPTTPEKLAPTTPEKPAPTTPEELA 556
Query: 126 -TNPELELPADPAQPDPAPLSRPAP---PRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQ 181
T PE P P +P P AP PA +P E P P T
Sbjct: 557 PTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT--------- 607
Query: 182 SGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
P+E+ +P AP +++ PA + P T + ++ +C AP
Sbjct: 608 --PKETAPTTPKGTAP--TTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAP 658
Score = 42.4 bits (98), Expect = 4e-04
Identities = 53/216 (24%), Positives = 69/216 (31%), Gaps = 33/216 (15%)
Query: 38 PTPTAPGPSPRRAPEPPLLTL--RPRPGTLRA--PGNAESPAPRRARPDLGRPWATRSAA 93
P PT P PE P T P P T +A P + PAP P P + A
Sbjct: 547 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP--TTPKEPAPTTPKEPA 604
Query: 94 SPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPA 153
K P T P P P PA + AP + P
Sbjct: 605 PTTPK------------ETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 652
Query: 154 HQSPAEEGPRGAAGGGPRTP-------PAGRTQGQSGP---RESPRASPGSAAP---AMA 200
PA P+G A P+ P PA T + P +E +P AP A
Sbjct: 653 CDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 712
Query: 201 SVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
+ +GP T +P T + P + + P
Sbjct: 713 TTKGPT--STTSDKPAPTTPKETAPTTPKEPAPTTP 746
Score = 40.8 bits (94), Expect = 0.001
Identities = 56/226 (24%), Positives = 78/226 (34%), Gaps = 36/226 (15%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEP-------PLLTLRPR 61
P +P P P A + E A TP P P+ + P P P
Sbjct: 565 PTTPEEPAPTTPKAAAPNTPKEP----APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 620
Query: 62 PGTLR--APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLP 119
P TL+ AP + PAP+ P + + + P G+ P T P
Sbjct: 621 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTA---------PTT--P 669
Query: 120 AHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTP--PAGR 177
PA TT P+ P P P L PAP +P + P+ A P T P
Sbjct: 670 KEPAPTT-PKEPAPTTPKGTAPTTLKEPAPT-----TPKKPAPKELA---PTTTKGPTST 720
Query: 178 TQGQSGPRESPRASPGS-AAPAMASVRGPARDGATRSEPHATEIRT 222
T + P +P + PA + + PA P +E+ T
Sbjct: 721 TSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVST 766
Score = 40.8 bits (94), Expect = 0.001
Identities = 53/216 (24%), Positives = 74/216 (34%), Gaps = 34/216 (15%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAP-GPSPRRAPEP-PLLTLRPRPGTLR 66
P +P +P P + +K S P PT P G +P EP P P P T +
Sbjct: 629 PTTPKKPAPKELAP--TTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK 686
Query: 67 --APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQ 124
AP + PAP + + A + P S +D PA
Sbjct: 687 GTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT----------------SDKPA---- 726
Query: 125 TTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGP 184
T P+ P P +P P P +PA +P P + P T T +S
Sbjct: 727 PTTPKETAPTTPKEPAPT-----TPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 781
Query: 185 RESPRASPGSAAPAMASVRGPARDGA-TRSEPHATE 219
+P S A+ + P G T P AT+
Sbjct: 782 ESTPELSAEPTPKALEN--SPKEPGVPTTKTPAATK 815
Score = 33.9 bits (76), Expect = 0.14
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 113 DPHTDLPAHPAQTTNPE---LELPADPAQP-DPAPLSRPAPPRPAHQSPAEEGPRGAAGG 168
+P P PA TT E + + P P +PAP + + P +P E P
Sbjct: 256 EPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP----TTPKEPAPTTTKEP 311
Query: 169 GPRTP--PAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQ 226
P TP PA T + P + A PA + + PA T EP T + P
Sbjct: 312 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPA--PTTPKEPAPTTPKEPTPT 369
Query: 227 SAR 229
+ +
Sbjct: 370 TPK 372
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 56.6 bits (135), Expect = 2e-08
Identities = 45/159 (28%), Positives = 57/159 (35%), Gaps = 12/159 (7%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHS 97
PTPT +P EP T + P T + P + P P P T+ A +
Sbjct: 325 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT 384
Query: 98 KMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAP--PRPAHQ 155
K +P P PA TT P+ P P +P P PAP PA
Sbjct: 385 K-------SAPTTPKEPAPTTPKKPAPTT-PKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 436
Query: 156 SPAEEGPRGAAGGGPRTP--PAGRTQGQSGPRESPRASP 192
+P E P P TP PA T + P + SP
Sbjct: 437 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 475
Score = 53.5 bits (127), Expect = 2e-07
Identities = 52/213 (24%), Positives = 72/213 (33%), Gaps = 18/213 (8%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTL--RPRPGTLR 66
P +P P P + E + P PT P AP+ P T P P T +
Sbjct: 404 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 463
Query: 67 APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTT 126
P + P P P T+SA + + + P P+ TT
Sbjct: 464 EPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP--------APTTTKSAPTTPKEPSPTT 515
Query: 127 NPELELPADPAQPDPAPLSRPAPP---RPAHQSPAEEGPRGAAGGGPRTP--PAGRTQGQ 181
E P P +P P +PAP PA +P E P P TP PA T +
Sbjct: 516 TKE-PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 574
Query: 182 SGPRESPRASPGSAAPAMASVRGPARDGATRSE 214
+ P + +P P + P + T E
Sbjct: 575 TAPTTPKKLTP--TTPEKLAPTTPEKPAPTTPE 605
Score = 45.1 bits (105), Expect = 6e-05
Identities = 53/235 (22%), Positives = 75/235 (31%), Gaps = 21/235 (8%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPG-PSPRRAPEP-PLLTLRPRPGTLR 66
P + P P + K P PT P P+P +P P P P T +
Sbjct: 490 PTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPK 549
Query: 67 APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQT- 125
P + P P P + A P + L P P P +
Sbjct: 550 EPAPTTTKKPAPTTPKEPAPTTPKETA-PTTPKKLTPTTPEKLAPTTPEKPAPTTPEELA 608
Query: 126 -TNPELELPADPAQPDPAPLSRPAP---PRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQ 181
T PE P P +P P AP PA +P E P P T
Sbjct: 609 PTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT--------- 659
Query: 182 SGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
P+E+ +P AP +++ PA + P T + ++ +C AP
Sbjct: 660 --PKETAPTTPKGTAP--TTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAP 710
Score = 42.4 bits (98), Expect = 4e-04
Identities = 53/216 (24%), Positives = 69/216 (31%), Gaps = 33/216 (15%)
Query: 38 PTPTAPGPSPRRAPEPPLLTL--RPRPGTLRA--PGNAESPAPRRARPDLGRPWATRSAA 93
P PT P PE P T P P T +A P + PAP P P + A
Sbjct: 599 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP--TTPKEPAPTTPKEPA 656
Query: 94 SPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPA 153
K P T P P P PA + AP + P
Sbjct: 657 PTTPK------------ETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 704
Query: 154 HQSPAEEGPRGAAGGGPRTP-------PAGRTQGQSGP---RESPRASPGSAAP---AMA 200
PA P+G A P+ P PA T + P +E +P AP A
Sbjct: 705 CDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 764
Query: 201 SVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
+ +GP T +P T + P + + P
Sbjct: 765 TTKGPT--STTSDKPAPTTPKETAPTTPKEPAPTTP 798
Score = 40.8 bits (94), Expect = 0.001
Identities = 56/226 (24%), Positives = 78/226 (34%), Gaps = 36/226 (15%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEP-------PLLTLRPR 61
P +P P P A + E A TP P P+ + P P P
Sbjct: 617 PTTPEEPAPTTPKAAAPNTPKEP----APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 672
Query: 62 PGTLR--APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLP 119
P TL+ AP + PAP+ P + + + P G+ P T P
Sbjct: 673 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTA---------PTT--P 721
Query: 120 AHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTP--PAGR 177
PA TT P+ P P P L PAP +P + P+ A P T P
Sbjct: 722 KEPAPTT-PKEPAPTTPKGTAPTTLKEPAPT-----TPKKPAPKELA---PTTTKGPTST 772
Query: 178 TQGQSGPRESPRASPGS-AAPAMASVRGPARDGATRSEPHATEIRT 222
T + P +P + PA + + PA P +E+ T
Sbjct: 773 TSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVST 818
Score = 40.8 bits (94), Expect = 0.001
Identities = 53/216 (24%), Positives = 74/216 (34%), Gaps = 34/216 (15%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAP-GPSPRRAPEP-PLLTLRPRPGTLR 66
P +P +P P + +K S P PT P G +P EP P P P T +
Sbjct: 681 PTTPKKPAPKELAP--TTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK 738
Query: 67 --APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQ 124
AP + PAP + + A + P S +D PA
Sbjct: 739 GTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT----------------SDKPA---- 778
Query: 125 TTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGP 184
T P+ P P +P P P +PA +P P + P T T +S
Sbjct: 779 PTTPKETAPTTPKEPAPT-----TPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 833
Query: 185 RESPRASPGSAAPAMASVRGPARDGA-TRSEPHATE 219
+P S A+ + P G T P AT+
Sbjct: 834 ESTPELSAEPTPKALEN--SPKEPGVPTTKTPAATK 867
Score = 33.9 bits (76), Expect = 0.14
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 113 DPHTDLPAHPAQTTNPE---LELPADPAQP-DPAPLSRPAPPRPAHQSPAEEGPRGAAGG 168
+P P PA TT E + + P P +PAP + + P +P E P
Sbjct: 308 EPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP----TTPKEPAPTTTKEP 363
Query: 169 GPRTP--PAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQ 226
P TP PA T + P + A PA + + PA T EP T + P
Sbjct: 364 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPA--PTTPKEPAPTTPKEPTPT 421
Query: 227 SAR 229
+ +
Sbjct: 422 TPK 424
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 56.6 bits (135), Expect = 2e-08
Identities = 45/159 (28%), Positives = 57/159 (35%), Gaps = 12/159 (7%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHS 97
PTPT +P EP T + P T + P + P P P T+ A +
Sbjct: 366 PTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTT 425
Query: 98 KMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAP--PRPAHQ 155
K +P P PA TT P+ P P +P P PAP PA
Sbjct: 426 K-------SAPTTPKEPAPTTPKKPAPTT-PKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 477
Query: 156 SPAEEGPRGAAGGGPRTP--PAGRTQGQSGPRESPRASP 192
+P E P P TP PA T + P + SP
Sbjct: 478 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 516
Score = 53.5 bits (127), Expect = 2e-07
Identities = 52/213 (24%), Positives = 72/213 (33%), Gaps = 18/213 (8%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTL--RPRPGTLR 66
P +P P P + E + P PT P AP+ P T P P T +
Sbjct: 445 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 504
Query: 67 APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTT 126
P + P P P T+SA + + + P P+ TT
Sbjct: 505 EPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEP--------APTTTKSAPTTPKEPSPTT 556
Query: 127 NPELELPADPAQPDPAPLSRPAPP---RPAHQSPAEEGPRGAAGGGPRTP--PAGRTQGQ 181
E P P +P P +PAP PA +P E P P TP PA T +
Sbjct: 557 TKE-PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 615
Query: 182 SGPRESPRASPGSAAPAMASVRGPARDGATRSE 214
+ P + +P P + P + T E
Sbjct: 616 TAPTTPKKLTP--TTPEKLAPTTPEKPAPTTPE 646
Score = 45.1 bits (105), Expect = 6e-05
Identities = 53/235 (22%), Positives = 75/235 (31%), Gaps = 21/235 (8%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPG-PSPRRAPEP-PLLTLRPRPGTLR 66
P + P P + K P PT P P+P +P P P P T +
Sbjct: 531 PTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPK 590
Query: 67 APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQT- 125
P + P P P + A P + L P P P +
Sbjct: 591 EPAPTTTKKPAPTTPKEPAPTTPKETA-PTTPKKLTPTTPEKLAPTTPEKPAPTTPEELA 649
Query: 126 -TNPELELPADPAQPDPAPLSRPAP---PRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQ 181
T PE P P +P P AP PA +P E P P T
Sbjct: 650 PTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTT--------- 700
Query: 182 SGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
P+E+ +P AP +++ PA + P T + ++ +C AP
Sbjct: 701 --PKETAPTTPKGTAP--TTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAP 751
Score = 42.4 bits (98), Expect = 4e-04
Identities = 53/216 (24%), Positives = 69/216 (31%), Gaps = 33/216 (15%)
Query: 38 PTPTAPGPSPRRAPEPPLLTL--RPRPGTLRA--PGNAESPAPRRARPDLGRPWATRSAA 93
P PT P PE P T P P T +A P + PAP P P + A
Sbjct: 640 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP--TTPKEPAPTTPKEPA 697
Query: 94 SPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPA 153
K P T P P P PA + AP + P
Sbjct: 698 PTTPK------------ETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 745
Query: 154 HQSPAEEGPRGAAGGGPRTP-------PAGRTQGQSGP---RESPRASPGSAAP---AMA 200
PA P+G A P+ P PA T + P +E +P AP A
Sbjct: 746 CDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 805
Query: 201 SVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
+ +GP T +P T + P + + P
Sbjct: 806 TTKGPT--STTSDKPAPTTPKETAPTTPKEPAPTTP 839
Score = 40.8 bits (94), Expect = 0.001
Identities = 56/226 (24%), Positives = 78/226 (34%), Gaps = 36/226 (15%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEP-------PLLTLRPR 61
P +P P P A + E A TP P P+ + P P P
Sbjct: 658 PTTPEEPAPTTPKAAAPNTPKEP----APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTA 713
Query: 62 PGTLR--APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLP 119
P TL+ AP + PAP+ P + + + P G+ P T P
Sbjct: 714 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTA---------PTT--P 762
Query: 120 AHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTP--PAGR 177
PA TT P+ P P P L PAP +P + P+ A P T P
Sbjct: 763 KEPAPTT-PKEPAPTTPKGTAPTTLKEPAPT-----TPKKPAPKELA---PTTTKGPTST 813
Query: 178 TQGQSGPRESPRASPGS-AAPAMASVRGPARDGATRSEPHATEIRT 222
T + P +P + PA + + PA P +E+ T
Sbjct: 814 TSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVST 859
Score = 40.8 bits (94), Expect = 0.001
Identities = 53/216 (24%), Positives = 74/216 (34%), Gaps = 34/216 (15%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAP-GPSPRRAPEP-PLLTLRPRPGTLR 66
P +P +P P + +K S P PT P G +P EP P P P T +
Sbjct: 722 PTTPKKPAPKELAP--TTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK 779
Query: 67 --APGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQ 124
AP + PAP + + A + P S +D PA
Sbjct: 780 GTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT----------------SDKPA---- 819
Query: 125 TTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGP 184
T P+ P P +P P P +PA +P P + P T T +S
Sbjct: 820 PTTPKETAPTTPKEPAPT-----TPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPD 874
Query: 185 RESPRASPGSAAPAMASVRGPARDGA-TRSEPHATE 219
+P S A+ + P G T P AT+
Sbjct: 875 ESTPELSAEPTPKALEN--SPKEPGVPTTKTPAATK 908
Score = 33.9 bits (76), Expect = 0.14
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 113 DPHTDLPAHPAQTTNPE---LELPADPAQP-DPAPLSRPAPPRPAHQSPAEEGPRGAAGG 168
+P P PA TT E + + P P +PAP + + P +P E P
Sbjct: 349 EPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP----TTPKEPAPTTTKEP 404
Query: 169 GPRTP--PAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQ 226
P TP PA T + P + A PA + + PA T EP T + P
Sbjct: 405 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPA--PTTPKEPAPTTPKEPTPT 462
Query: 227 SAR 229
+ +
Sbjct: 463 TPK 465
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 55.8 bits (133), Expect = 3e-08
Identities = 64/249 (25%), Positives = 91/249 (36%), Gaps = 34/249 (13%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPG-----PSPRRAPEPPLLTLRPRPG 63
P +P PP A +G+ TP +P PSP+ AP P T G
Sbjct: 1172 PTTPAAT-PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230
Query: 64 TLRAPGNAESPAPRRARPDL--GRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAH 121
L P +P A P G P +P L+GG ++ PH P
Sbjct: 1231 GLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGG-LATPPHKGAPNP 1289
Query: 122 PAQT---------TNPELELPADPAQPDPAPLSRP-------APPRPAHQSPAEEG---- 161
T T+P P PA P+P P AP PA P+ +G
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTL 1349
Query: 162 --PRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATE 219
++ GGP TP + +G + P +P G A + RGPA + + +P +
Sbjct: 1350 PATTPSSKGGPTTPSS--KEGPTPPAATPSHKGGPAMTPPSPKRGPAIP-SPKGDPTSPA 1406
Query: 220 IRTLEPQSA 228
+ L P+ A
Sbjct: 1407 VIPLSPKKA 1415
Score = 53.5 bits (127), Expect = 2e-07
Identities = 64/245 (26%), Positives = 86/245 (35%), Gaps = 49/245 (20%)
Query: 9 PVSPGRPCPPLFS-----AWEALSKVEGSECRALPTPTAPG-----PSPRRAPEPPLLTL 58
P+ G P P + A ++G+ TP +P PSP+ AP PP T
Sbjct: 1051 PLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP 1110
Query: 59 RPRPGTLRAPGN--------AESPAPR---RARPDLGRPWATRSAASPHSKMWLGSHLRG 107
G L P + A P+P+ P G P T AA+P S
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAP--TTPAATPPSPK-------- 1160
Query: 108 GEMSGDPHTDLPAHPAQT---------TNPELELPADPAQPDPAP---LSRP----APPR 151
G ++ P P PA T T P PA P+P L+ P AP
Sbjct: 1161 GGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1220
Query: 152 PAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGAT 211
PA P+ +G G A P+ P P+ P P AP + P+ G
Sbjct: 1221 PAATPPSPKG--GLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGL 1278
Query: 212 RSEPH 216
+ PH
Sbjct: 1279 ATPPH 1283
Score = 53.1 bits (126), Expect = 2e-07
Identities = 59/229 (25%), Positives = 83/229 (36%), Gaps = 17/229 (7%)
Query: 11 SPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGN 70
SP P F +LS +GS+ T + PSP+ AP P +T G P
Sbjct: 826 SPVSPVEASFLPENSLS-FQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKE 884
Query: 71 AESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPEL 130
+P+ + P+ A+P K + T P + +P+
Sbjct: 885 TPTPSV------VNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPK- 937
Query: 131 ELPADPAQPDPAPLSRPAPPRP--AHQSPAEEGPRGAAGGGPRTP-PAGRTQGQSGPRES 187
P PA P+P PA P P A PA P + GGP TP P G + S
Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP--SPKGGPATPSPKGAPTPPAATPPS 995
Query: 188 PRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARSCCLAAP 236
P+ P + +P A P T P + T P+ A + A P
Sbjct: 996 PKGGPATPSPKGA----PTPPAVTPPSPKGSPAATPFPKGASTPPAATP 1040
Score = 52.8 bits (125), Expect = 3e-07
Identities = 63/241 (26%), Positives = 85/241 (35%), Gaps = 36/241 (14%)
Query: 9 PVSPGRPCPPLFS------AWEALSKVEGSECRALPTPTAPG------PSPRRAPEPPLL 56
P G P PP + + A +G+ TP +P P P+ AP P
Sbjct: 1003 PSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAA 1062
Query: 57 TLRPRPGTLRAPGNAESPAPRRARP--DLGRPWATRSAASPHSKMWLGSHLRGGEMSGDP 114
TL G P +P P A P G P +P +GG ++ P
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGG-LATPP 1121
Query: 115 HTDLPAHPAQT---------TNPELELPADPAQPDPAP---LSRPAPPRPAHQSPAEEGP 162
H P PA T T P P PA P+P L+ P PP+ A +PA P
Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP-PPKGAPTTPAATPP 1180
Query: 163 RGAAG-------GGPRTPPAGRTQGQSG-PRESPRASPGSAAPAMASVRGPARDGATRSE 214
G G P TP A + G SP+ +P + A S +G + +
Sbjct: 1181 SPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGA 1240
Query: 215 P 215
P
Sbjct: 1241 P 1241
Score = 52.4 bits (124), Expect = 4e-07
Identities = 55/212 (25%), Positives = 78/212 (36%), Gaps = 18/212 (8%)
Query: 11 SPGRPCPPLFSAWEALSKVEGSECRALPTPTAP--GPS---PRRAPEPPLLTLRPRPGTL 65
+P PP A +G+ A+ TP +P GP+ P+ AP PP T G+
Sbjct: 1265 TPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSP 1324
Query: 66 RAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAH---P 122
P +P P P + T A +P SK G + P P+H P
Sbjct: 1325 GTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG--GPTTPSSKEGPTPPAATPSHKGGP 1382
Query: 123 AQTTNPELELPADPA-QPDP-APLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPA----- 175
A T PA P+ + DP +P P P+ A +P G TPPA
Sbjct: 1383 AMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVS 1442
Query: 176 -GRTQGQSGPRESPRASPGSAAPAMASVRGPA 206
+ S P+ P P + +V P+
Sbjct: 1443 LKKAPATSAPKGGPATPSSKGDPTLPAVTPPS 1474
Score = 49.7 bits (117), Expect = 2e-06
Identities = 58/220 (26%), Positives = 72/220 (32%), Gaps = 32/220 (14%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPG-----PSPRRAPEPPLLTLRPRPG 63
P +P PP A +G+ TP +P PSP+ AP P T G
Sbjct: 1149 PTTPAAT-PPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1207
Query: 64 TLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPA 123
L P +P A P P A+P K G P T P+
Sbjct: 1208 GLATPSPKGAPTTPAATP----PSPKGGLATPSPK-------------GAPTTPAATPPS 1250
Query: 124 Q----TTNPELELPADPAQPDPAPLSRPA-PPRPAHQSPAEEGPRGAAGGGPRTPPAGRT 178
T P P PA P+ A PP +PA P GG +PP G
Sbjct: 1251 PKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAP 1310
Query: 179 QGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHAT 218
+ SP+ SPG+ P A P T P T
Sbjct: 1311 TPPAATPPSPKGSPGTPPPKGA----PTPPAVTPPSPKGT 1346
Score = 48.9 bits (115), Expect = 4e-06
Identities = 61/199 (30%), Positives = 76/199 (38%), Gaps = 44/199 (22%)
Query: 15 PCPPLFSAWEALSKVEGSECRALPTPTAPG----PSPRRAPEPPLLTLRPRPGTLRAPGN 70
P P ALS S +A TP G PSP+ AP PP T P P G
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAAT-PPSP-----KGG 953
Query: 71 AESPAPRRARPDLGRPWA-TRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPE 129
+P+P+ WA T AA+P S +GG + P P PA T
Sbjct: 954 PATPSPK---------WAPTPPAATPPSP-------KGGPATPSPK-GAPTPPAATPPSP 996
Query: 130 LELPADPAQPDPAPLSRPA--PPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRES 187
PA P+ P AP + PA PP P A P+GA+ TPP S
Sbjct: 997 KGGPATPS-PKGAP-TPPAVTPPSPKGSPAATPFPKGASTPPAATPP------------S 1042
Query: 188 PRASPGSAAPAMASVRGPA 206
P+ SP + + PA
Sbjct: 1043 PKGSPAATPLPKGAPTTPA 1061
Score = 48.1 bits (113), Expect = 7e-06
Identities = 68/260 (26%), Positives = 93/260 (35%), Gaps = 48/260 (18%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPG------------PSPRRAPEPPLL 56
P SP P P A + K + + PT P PS RR P P
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTA 1531
Query: 57 TL--RPRPGTLRA-----PGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGE 109
TL + P TL P P+P++ P + P + A+P SK E
Sbjct: 1532 TLLSKKTPATLAPKEALIPPAMTVPSPKKT-PAIPTP--KEAPATPSSK----------E 1578
Query: 110 MSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGG 169
S P + + EL +P PA P+P P PP SP + A G
Sbjct: 1579 ASSPPAVTPSTYKGAPSPKELLIP--PAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGT 1636
Query: 170 PRTPPAGRTQGQSGPRE--SPRASPGSAAPAMASVRGPARDGATRSE-------PHATEI 220
P +PP + + P S G+ P AS PA+ G T + P +T I
Sbjct: 1637 PTSPPVTPSSLKDSPTSPASVTCKMGATVP-QASKGLPAKKGPTALKEVLVAPAPESTPI 1695
Query: 221 RTLE----PQSARSCCLAAP 236
T PQ+ +S + P
Sbjct: 1696 ITAPTRKGPQTKKSSATSPP 1715
Score = 46.2 bits (108), Expect = 3e-05
Identities = 56/204 (27%), Positives = 74/204 (36%), Gaps = 35/204 (17%)
Query: 35 RALPTPTAPGP-SPRRAPEPPLLTLRPRPGTLRAPGNAESPA----------------PR 77
+ PTP+A P SP+ PP T P P + P E PA P+
Sbjct: 862 KGAPTPSAVTPLSPKGVTLPPKET--PTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPK 919
Query: 78 RARPD---LGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPA 134
+AR G P + +P +GG + P P PA T PA
Sbjct: 920 KARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKW-APTPPAATPPSPKGGPA 978
Query: 135 DPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASP-- 192
P+ P AP A P PA P+GA TPP+ P+ SP A+P
Sbjct: 979 TPS-PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPS--------PKGSPAATPFP 1029
Query: 193 -GSAAPAMASVRGPARDGATRSEP 215
G++ P A+ P A P
Sbjct: 1030 KGASTPPAATPPSPKGSPAATPLP 1053
Score = 42.7 bits (99), Expect = 3e-04
Identities = 54/211 (25%), Positives = 76/211 (36%), Gaps = 28/211 (13%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPG----PSPRRAPEPPLLTLRPRPGT 64
P G P PP + +G+ TP++ G PS + P PP T + G
Sbjct: 1327 PPPKGAPTPPAVTP----PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGP 1382
Query: 65 LRAP-------------GNAESPA--PRRARPDLGRPWATRSAASPHSKMWLGSHLRGGE 109
P G+ SPA P + P AA+P +
Sbjct: 1383 AMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVS 1442
Query: 110 MSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGG 169
+ P T P T + + + P PA P+P PAP + A S ++ P A G
Sbjct: 1443 LKKAPATSAPKGGPATPSSKGD-PTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMG 1501
Query: 170 PRTPPAGRTQGQSGPRESPRASPGSAAPAMA 200
T PA S P+E P A+P S +A
Sbjct: 1502 APTLPA---VIPSSPKEVP-ATPSSRRDPIA 1528
Score = 31.6 bits (70), Expect = 0.70
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 110 MSGDPHTDLPAHPAQTTNPELE---LPADPAQPDPAPLSRPAPPRPAHQSPA-EEGPRGA 165
M G+ +PA + P+ E LP A A L +P P P SPA ++ P A
Sbjct: 1 MPGEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSA 60
Query: 166 AGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGP 205
A P P++S G+A P + P
Sbjct: 61 ANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAP 100
Score = 31.6 bits (70), Expect = 0.70
Identities = 45/198 (22%), Positives = 66/198 (33%), Gaps = 34/198 (17%)
Query: 34 CRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPG--NAESPAPRRARP------DLGR 85
C L T P+ P P L PGT + G + + AP + P D G
Sbjct: 718 CAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSG- 776
Query: 86 PWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPE-----LELPADP---- 136
A+ +A+S + +L +S P T P + P+ L P P
Sbjct: 777 --ASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEAS 834
Query: 137 -----------AQPDPAPLSRPAPPRP-AHQSPAEEGPRGAAGG--GPRTPPAGRTQGQS 182
++ PA P PP P +P+ P G P+ P
Sbjct: 835 FLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLP 894
Query: 183 GPRESPRASPGSAAPAMA 200
P+E P APA++
Sbjct: 895 FPKEGPATPAPKQAPALS 912
Score = 28.1 bits (61), Expect = 7.8
Identities = 38/171 (22%), Positives = 60/171 (35%), Gaps = 12/171 (7%)
Query: 10 VSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRP------- 62
V+P P+ +A + + A P P PS + + PL T+ P P
Sbjct: 1686 VAPAPESTPIITA-PTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKD 1744
Query: 63 GTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLP--A 120
+ A G S +P+ +T A+ K+ + P LP
Sbjct: 1745 SSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAP 1804
Query: 121 HPAQTTNPELE-LPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGP 170
P T P+ + LP+ P +P S+P P + P +GG P
Sbjct: 1805 SPVPTLPPKQQFLPSSPGLVLESP-SKPLAPADEDELLPLIPPEPISGGVP 1854
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 55.1 bits (131), Expect = 6e-08
Identities = 65/218 (29%), Positives = 70/218 (32%), Gaps = 38/218 (17%)
Query: 15 PCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRP-----RPGTLRAPG 69
P PP A + V S LP P P P P PP L P P PG
Sbjct: 215 PPPP-----SAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPG 269
Query: 70 NAESPAPRRARPDLGRPWATRS-------AASPH---SKMWLGSHLRGGEMSGDPHTDLP 119
A P P G P S PH S+M L H G G PH P
Sbjct: 270 AAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHH--GPHGLGHPHAGPP 327
Query: 120 AHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEG----PRGAAGGGPRTPPA 175
Q P P P P P+ P P P SP P G G P PP
Sbjct: 328 GSGGQ---PPPRPPPGMPHPGPPPMGMP-PRGPPFGSPMGHPGPMPPHGMRGPPPLMPPH 383
Query: 176 GRTQG--------QSGPRESPRASPGSAAPAMASVRGP 205
G T Q GP PR +P P +RGP
Sbjct: 384 GYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPLRGP 421
Score = 37.7 bits (86), Expect = 0.010
Identities = 43/164 (26%), Positives = 54/164 (32%), Gaps = 22/164 (13%)
Query: 42 APGPSPRRAPEPPLLTLR---PRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSK 98
A P P AP P + +L P PG + PG+ P P G P A P
Sbjct: 212 ADAPPPPSAPNPVVSSLGSGLPPPG-MPPPGSFPPPVPPPGALPPGIP-----PAMPPPP 265
Query: 99 MWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSP- 157
M G+ G +G P P H +P P P + + AH P
Sbjct: 266 MPPGAAGHGPPSAGTPGAGHPGHGHSHPHP--------FPPGGMPHPGMSQMQLAHHGPH 317
Query: 158 ----AEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAP 197
GP G+ G P PP G P P P +P
Sbjct: 318 GLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSP 361
Score = 32.3 bits (72), Expect = 0.41
Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
Query: 128 PELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGP---RTPPAGRT-QGQSG 183
P +P + P P P PP P P GAAG GP TP AG G S
Sbjct: 233 PPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSH 292
Query: 184 PRESPRASPGSAAPAMASVRGPARDGATRSEPHA 217
P P G P M+ ++ PHA
Sbjct: 293 PHPFPPG--GMPHPGMSQMQLAHHGPHGLGHPHA 324
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 54.7 bits (130), Expect = 8e-08
Identities = 64/223 (28%), Positives = 90/223 (40%), Gaps = 19/223 (8%)
Query: 11 SPGRPC--PPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAP 68
SP RP PP +A + S L T +P SP +P LT+ P L+A
Sbjct: 443 SPSRPASTPPDSPPLQAPLSLPASP--PLQTSLSPAVSPLSSP----LTIHP----LQAL 492
Query: 69 GNAESPAPRRARPDLGRP-WATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTN 127
+ S +P+ L P T+S+ +P S + L + P P P QT +
Sbjct: 493 SSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPP--PLQTAS 550
Query: 128 PELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRT---QGQSGP 184
L P P PAP APP P +P E P A P+ PPA + QG P
Sbjct: 551 APLTTPHLETPPCPAPCPLQAPPSPL-TTPPPETPSSIATPPPQAPPALASPPLQGLPSP 609
Query: 185 RESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQS 227
SP A+P AP ++ + + P + + T PQ+
Sbjct: 610 PLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQA 652
Score = 52.0 bits (123), Expect = 5e-07
Identities = 56/194 (28%), Positives = 72/194 (37%), Gaps = 42/194 (21%)
Query: 12 PGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNA 71
P PPL +A L+ L TP P P P +AP PL T P P T P +
Sbjct: 539 PSLAPPPLQTASAPLTTPH------LETPPCPAPCPLQAPPSPLTT--PPPET---PSSI 587
Query: 72 ESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELE 131
+P P +A P L P + P S + T P P P L+
Sbjct: 588 ATPPP-QAPPALASPPLQGLPSPPLSPL---------------ATPPPQAPPXLALPPLQ 631
Query: 132 L-PADPAQPDPAPLSRPAPPRP----AHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRE 186
P+ PA P +PL+ P+P P H A P PP+ Q P
Sbjct: 632 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP----------PPSPPVQAPFSPPA 681
Query: 187 SPRASPGSAAPAMA 200
SP SP + P+ A
Sbjct: 682 SPPVSPSATPPSQA 695
Score = 46.2 bits (108), Expect = 3e-05
Identities = 55/214 (25%), Positives = 80/214 (37%), Gaps = 14/214 (6%)
Query: 2 ASQSLYKPVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPR 61
A +L P G P PPL A + ALP AP P P PL T P+
Sbjct: 594 APPALASPPLQGLPSPPLSPL--ATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQ 651
Query: 62 PGTLRAPGNAESPAPRRARPDLGRPWATRSA------ASPHSKMWLGSHLRGGEMSGDPH 115
A ++P P + P++ ++ A+P S+ ++ P
Sbjct: 652 APNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 711
Query: 116 TDLPAHPAQTTNPELELP--ADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAG--GGPR 171
P P+ T P+ P A P Q P+P + P P P+ P P AA P
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASP-PMSPSATPPPRVPPLLAAPPLQVPP 770
Query: 172 TPPAGRTQGQSGPRESPRASPGSAAPAMASVRGP 205
+PPA + P+A P A P + ++ P
Sbjct: 771 SPPASLPMSPLA-KPPPQAPPALATPPLQALPSP 803
Score = 45.4 bits (106), Expect = 5e-05
Identities = 55/215 (25%), Positives = 79/215 (36%), Gaps = 20/215 (9%)
Query: 27 SKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRR-ARPDLGR 85
S+ S L +P GPS R P P +P+P L+A + PR+ A P LG
Sbjct: 239 SRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALG- 297
Query: 86 PWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLS 145
P ++ A+P G+ R + T LPA LP P P PL
Sbjct: 298 PLSSSPLATPSPS---GTKARPVPPPDNAATPLPA----------TLPPSPPLATPLPL- 343
Query: 146 RPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMA--SVR 203
APP P+ + P A + PP+ T P P ++ S++
Sbjct: 344 --APPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ 401
Query: 204 GPARDGATRSEPHATEIRTLEPQSARSCCLAAPWQ 238
P A S T + + Q+ S +P Q
Sbjct: 402 APPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQ 436
Score = 44.7 bits (104), Expect = 8e-05
Identities = 70/236 (29%), Positives = 93/236 (39%), Gaps = 34/236 (14%)
Query: 11 SPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGN 70
+PG P P A S+ G+E P P+P P PP T PR A +
Sbjct: 168 TPGTPSP----AMARRSRAAGTEVGL------PRPAPSARPRPP--TEGPRKSVSSASEH 215
Query: 71 A---ESPAPRRARPDLG----RPWATRSAASPHSKMWLGSHLRGGEMS-GDPHTDLPAHP 122
+ SPA RR RP G RP A+RS +S S L S R G + G P PAHP
Sbjct: 216 STTEPSPAARR-RPSAGGGLQRP-ASRSLSS--SATPLSSPARSGPSARGTPRA--PAHP 269
Query: 123 AQTTNPELEL----PADPAQPDPAPLSRPAPPRP-AHQSPAEEGPRGAAGGGPRTPPAGR 177
+Q L+ P + D AP P P A SP+ R P
Sbjct: 270 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPA 329
Query: 178 TQGQSGPRES--PRASPG-SAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARS 230
T S P + P A P SA P++ ++ P +++ P T P S ++
Sbjct: 330 TLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQT 385
Score = 42.7 bits (99), Expect = 3e-04
Identities = 61/225 (27%), Positives = 81/225 (36%), Gaps = 44/225 (19%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGP-SPRRAPEP---PLLTLRPR--- 61
P+SP PP +A + + P+P A P SP P P PLL P
Sbjct: 715 PMSPSATPPP-----QAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVP 769
Query: 62 ---PGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDL 118
P +L P + + P +A P L P ++ SP + G+ P L
Sbjct: 770 PSPPASL--PMSPLAKPPPQAPPALATP-PLQALPSPPASF-------PGQAPFSPSASL 819
Query: 119 PAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRT 178
P P T P+ A P P P+PP SP + PR R P G
Sbjct: 820 PMSPLATPPPQ----APPVLAAPLLQVPPSPPA----SPTLQAPR-------RPPTPGPD 864
Query: 179 QGQSGPRESPRASPGSAAPAMAS----VRGPARDGATRSEPHATE 219
SGPR + +PG P S + GP G + S E
Sbjct: 865 TSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPE 909
Score = 37.0 bits (84), Expect = 0.017
Identities = 30/86 (34%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 136 PAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSG---PRESPRASP 192
P P P P PP P +PA GAAG R P A R G G P +PRA P
Sbjct: 22 PGLLTPRPPGSPRPPPPV--TPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGP 79
Query: 193 GSAAPAMA---SVRGPARDGATRSEP 215
+A + + R PA R+ P
Sbjct: 80 TRSAGTSSRNPASRPPASGRGERAPP 105
Score = 36.6 bits (83), Expect = 0.022
Identities = 63/234 (26%), Positives = 85/234 (36%), Gaps = 40/234 (17%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTA--PGPSP----RRAPEPPLLTLRPR- 61
P+SP PP +A + +ALP+P A PG +P P PL T P+
Sbjct: 777 PMSPLAKPPP-----QAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 831
Query: 62 PGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAH 121
P L AP P+P A P L P R +P +SG P L
Sbjct: 832 PPVLAAPLLQVPPSPP-ASPTLQAP---RRPPTPGPDT---------SVSG-PRLTLALA 877
Query: 122 PAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGP-------RTPP 174
P P + + PD A S A P + GP G A P P
Sbjct: 878 PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHP 937
Query: 175 AGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSA 228
A ++G + P + R +PG+ P P G ++ T T P+SA
Sbjct: 938 AAWSRGPAPPL-AFRGAPGAPLP------WPPATGPGSADGLCTIYETEGPESA 984
Score = 30.4 bits (67), Expect = 1.6
Identities = 60/245 (24%), Positives = 79/245 (32%), Gaps = 74/245 (30%)
Query: 25 ALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLG 84
A ++ + L TP PG SPR P PP+ P LR G A + +P
Sbjct: 12 AAARTPAARAPGLLTPRPPG-SPR--PPPPVT-----PAALRVLGAAGAVG---RKPLAE 60
Query: 85 RPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPL 144
R A P S G G S +P + PA P + P P+
Sbjct: 61 RAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAK------NTSPGPV 114
Query: 145 SRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGR---------TQGQSGPRESPRAS---- 191
S P G A G R P G+ T + E+P+ S
Sbjct: 115 SSP----------------GRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSA 158
Query: 192 ----------PGSAAPAMA-----------------SVR-GPARDGATRSEPHATEIRTL 223
PG+ +PAMA S R P +G +S A+E T
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT 218
Query: 224 EPQSA 228
EP A
Sbjct: 219 EPSPA 223
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 54.3 bits (129), Expect = 1e-07
Identities = 61/192 (31%), Positives = 76/192 (39%), Gaps = 24/192 (12%)
Query: 60 PRPGTLRAPGNAESPAPR---RARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHT 116
P G A G A PA ARP G W +R A +H G + D
Sbjct: 312 PACGVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQRGC-----AHQDGQRRTRDGAG 366
Query: 117 DLPAHPAQTTNPE------LELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGP 170
+ + PA+ +P LP Q +P RP RP+ PA EGP GG P
Sbjct: 367 NHASEPARVWSPPPRRQRPRRLPRASLQEEPK--RRPPCARPSGAGPAREGPAAWPGGAP 424
Query: 171 RTP---PAGRTQG-QSGPRESPRASPGSAAPAMASVRGPARD--GATRSEPHATEIRTLE 224
P P GR Q + GPR +PR P S+ S G D G +R+ A R
Sbjct: 425 TPPHARPTGRRQDPEPGPR-APRGGPASSGWHAGSAAGRGWDPGGGSRARRRAARGRGC- 482
Query: 225 PQSARSCCLAAP 236
+SARS A P
Sbjct: 483 LRSARSSPHARP 494
Score = 33.9 bits (76), Expect = 0.14
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 15 PCPP----LFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGN 70
P PP L S W ++ CR + +P+ PGP A P L PG LRA
Sbjct: 583 PTPPDSRQLRSLWPSMRNFPTGHCRGISSPSPPGP----ASGSPRQFLHVSPGILRAASL 638
Query: 71 AESPA 75
+P+
Sbjct: 639 LRAPS 643
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 54.3 bits (129), Expect = 1e-07
Identities = 61/192 (31%), Positives = 76/192 (39%), Gaps = 24/192 (12%)
Query: 60 PRPGTLRAPGNAESPAPR---RARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHT 116
P G A G A PA ARP G W +R A +H G + D
Sbjct: 312 PACGVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQRGC-----AHQDGQRRTRDGAG 366
Query: 117 DLPAHPAQTTNPE------LELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGP 170
+ + PA+ +P LP Q +P RP RP+ PA EGP GG P
Sbjct: 367 NHASEPARVWSPPPRRQRPRRLPRASLQEEPK--RRPPCARPSGAGPAREGPAAWPGGAP 424
Query: 171 RTP---PAGRTQG-QSGPRESPRASPGSAAPAMASVRGPARD--GATRSEPHATEIRTLE 224
P P GR Q + GPR +PR P S+ S G D G +R+ A R
Sbjct: 425 TPPHARPTGRRQDPEPGPR-APRGGPASSGWHAGSAAGRGWDPGGGSRARRRAARGRGC- 482
Query: 225 PQSARSCCLAAP 236
+SARS A P
Sbjct: 483 LRSARSSPHARP 494
Score = 33.9 bits (76), Expect = 0.14
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 15 PCPP----LFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGN 70
P PP L S W ++ CR + +P+ PGP A P L PG LRA
Sbjct: 583 PTPPDSRQLRSLWPSMRNFPTGHCRGISSPSPPGP----ASGSPRQFLHVSPGILRAASL 638
Query: 71 AESPA 75
+P+
Sbjct: 639 LRAPS 643
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 53.9 bits (128), Expect = 1e-07
Identities = 61/232 (26%), Positives = 76/232 (32%), Gaps = 29/232 (12%)
Query: 8 KPVSPGRPCPPLFSAWEALSKVEGSECRALPTPTA--------PGPS-PRRAPEPPLLTL 58
+P+ P P PP A + EGS P P A P P+ P + P L
Sbjct: 112 RPLVPAGPAPP---AAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAA 168
Query: 59 RPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAA---SPHSKMWLGSHLRGGEMS---- 111
R PG PG P P + SAA S H+ S + G +
Sbjct: 169 RAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPL 228
Query: 112 ---GDPHTDLPAHP-----AQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPR 163
P T + P A PA PA PA P PP PA + P
Sbjct: 229 PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPA 288
Query: 164 GAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEP 215
G P PP Q +P +P + P A V G GA + P
Sbjct: 289 GPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGP--AGVSGQPGPGAAAAAP 338
Score = 37.0 bits (84), Expect = 0.017
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 162 PRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRS-EPHATEI 220
P GAAG GP P G P + RA PG P P R P A ++
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL 126
Query: 221 RTLEPQSARSC 231
R SA SC
Sbjct: 127 RPPPEGSAGSC 137
Score = 33.9 bits (76), Expect = 0.14
Identities = 37/132 (28%), Positives = 44/132 (33%), Gaps = 26/132 (19%)
Query: 101 LGSHLRGGEMSGDPHTD--LPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRP------ 152
LG+H+ G +G PA A PE PA A+P RP PP P
Sbjct: 58 LGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPP-PAGRARPGGGGPQRPGPPSPRRPLVP 116
Query: 153 -------AHQSPAEEGPRG---------AAGGGPRTPPAGRTQGQSGPRESPRASPG-SA 195
A P EG G A GP PAG + + RA PG
Sbjct: 117 AGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP 176
Query: 196 APAMASVRGPAR 207
P GP +
Sbjct: 177 GPGPGPGPGPGK 188
Score = 31.2 bits (69), Expect = 0.92
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 158 AEEGPRGAA----GGGPRTPPAGRTQ-GQSGPRE----SPRAS--PGSAAPAMASVRGPA 206
A GP A G P PPAGR + G GP+ SPR P AP A +R P
Sbjct: 71 AGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPP 130
Query: 207 RDGATRSEP 215
A P
Sbjct: 131 EGSAGSCAP 139
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 53.9 bits (128), Expect = 1e-07
Identities = 64/229 (27%), Positives = 79/229 (34%), Gaps = 30/229 (13%)
Query: 12 PGRPCPPLFSAWEALSKVEGSECRA------LPTPTAPGPSPRRAPEPPLLTL---RPRP 62
P P PP FS E V + +P+ TAP P+P AP PP + +P P
Sbjct: 861 PSAP-PPQFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFPVPPPQPLP 919
Query: 63 GTLRAPGNAESPAPRRARPDLGRPWA---------TRSAASPHSKMWLGSHLRGGEMS-G 112
P A+ P P + G P + PH G +
Sbjct: 920 TPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQ 979
Query: 113 DPHTDLPAHPA----QTTNPELELPADPAQPDPAPLSRPAPPRPAHQS-PAEEGPRGAAG 167
PH P P Q+ P P QP P PL P PA PA G
Sbjct: 980 HPHLFPPQAPGLLPPQSPYPYAPQPGVLGQP-PPPLHTQLYPGPAQDPLPAHSGALPFPS 1038
Query: 168 GGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPH 216
GP PP GP S R AAP ++RGP+ G + PH
Sbjct: 1039 PGPPQPP--HPPLAYGPAPSTRPMGPQAAP--LTIRGPSSAGQSTPSPH 1083
Score = 37.7 bits (86), Expect = 0.010
Identities = 50/182 (27%), Positives = 62/182 (34%), Gaps = 28/182 (15%)
Query: 40 PTAPGPSPRR-----APEPPLLTLRPRP-GTLRAPGNAESPAPRRAR----PDLGRPWAT 89
P APG P + AP+P +L P P T PG A+ P P + P G P
Sbjct: 986 PQAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPP--- 1042
Query: 90 RSAASPHSKMWLGSHLRGGEMSGD--PHTDLPAHPAQTTNPELELPADPAQPDPAPLSRP 147
PH + G M P T A + P L PA P+P P
Sbjct: 1043 ---QPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPA---PSPGPGP 1096
Query: 148 APPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPAR 207
PPRP P RGAA A + SPG P + + A
Sbjct: 1097 VPPRPPAAEPPPCLRRGAAA-------ADLLSSSPESQHGGTQSPGGGQPLLQPTKVDAA 1149
Query: 208 DG 209
+G
Sbjct: 1150 EG 1151
Score = 34.7 bits (78), Expect = 0.083
Identities = 51/192 (26%), Positives = 61/192 (31%), Gaps = 35/192 (18%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGR---------PWA 88
P PTAP P R E + P LR+ PR LG P+
Sbjct: 718 PRPTAPKPLLPRREESEAVEAGDPPEELRSLPPDMVAGPRLPDTFLGSATPLHFPPSPFP 777
Query: 89 TRSAASPHSKMWLGSHLRGGEMSGD----------PHTDLPA-----HPAQTTNPELEL- 132
+ + PH +L L G SG PH A +PA PEL L
Sbjct: 778 SSTGPGPH---YLSGPLPPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELGLV 834
Query: 133 ----PADPAQPDPAPLSRPAPP---RPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPR 185
P P PAPP P+ P GP A P T Q
Sbjct: 835 PRSSPQHGVVSSPYVGVGPAPPVAGLPSAPPPQFSGPELAMAVRPATTTVDSIQAPIPSH 894
Query: 186 ESPRASPGSAAP 197
+PR +P A P
Sbjct: 895 TAPRPNPTPAPP 906
Score = 28.1 bits (61), Expect = 7.8
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 114 PHTDLPAHPAQTTNPELELPADPAQPD--PAPLSRPAP--PRPAHQSPAEEGP 162
P LP P LP P P PLS P P P+P + P E P
Sbjct: 1516 PVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAP 1568
>gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Homo
sapiens]
Length = 847
Score = 53.9 bits (128), Expect = 1e-07
Identities = 51/162 (31%), Positives = 63/162 (38%), Gaps = 35/162 (21%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHS 97
PTPT P P P P PL+ +L+ P + +PAP DLG P RSA SP
Sbjct: 679 PTPT-PAPCPTEPPPSPLICF-----SLKTPDSPPTPAPLLL--DLGIPVGQRSAKSPRR 730
Query: 98 KMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSP 157
+ RGG +S P T A P P P PL + PRP SP
Sbjct: 731 E----EEPRGGTVSPPPGTSRSA------------PGTPGTPRSPPLGLISRPRP---SP 771
Query: 158 AEE--GPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAP 197
P GPR P P+ +PR +P + P
Sbjct: 772 LRSRIDPWSFVSAGPRPSPL------PSPQPAPRRAPWTLFP 807
Score = 35.4 bits (80), Expect = 0.049
Identities = 49/175 (28%), Positives = 58/175 (33%), Gaps = 30/175 (17%)
Query: 5 SLYKPVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGT 64
SL P SP P P L +P SPRR EP T+ P PGT
Sbjct: 699 SLKTPDSPPTPAPLLLDL-------------GIPVGQRSAKSPRREEEPRGGTVSPPPGT 745
Query: 65 LR-APGNAESP-APRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPA-H 121
R APG +P +P RP RS P S + +G + LP+
Sbjct: 746 SRSAPGTPGTPRSPPLGLISRPRPSPLRSRIDPWSFV----------SAGPRPSPLPSPQ 795
Query: 122 PAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAG 176
PA P P DP S PA P + P P AG
Sbjct: 796 PAPRRAPWTLFP----DSDPFWDSPPANPFQGGPQDCRAQTKDMGAQAPWVPEAG 846
Score = 31.6 bits (70), Expect = 0.70
Identities = 47/179 (26%), Positives = 58/179 (32%), Gaps = 25/179 (13%)
Query: 46 SPRRAPE-PPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSH 104
SP +P PP L P +L E P+R P A R ++S K+ +
Sbjct: 598 SPLGSPSTPPALNGNPPRPSL------EPEEPKRPVP------AERGSSSGTPKLIQRAL 645
Query: 105 LRGGEMSGDPHTDLPAHPAQTTNPEL-ELPADPAQPDPAPLSRPAPPRP-------AHQS 156
LRG + P E E P P P PAP PP P S
Sbjct: 646 LRGTALLASLGLGRDLQPPGGPGRERGESPTTPPTPTPAPCPTEPPPSPLICFSLKTPDS 705
Query: 157 PAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEP 215
P P G P G+ +S RE + P S P G RS P
Sbjct: 706 PPTPAPLLLDLG----IPVGQRSAKSPRREEEPRGGTVSPPPGTSRSAPGTPGTPRSPP 760
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 53.5 bits (127), Expect = 2e-07
Identities = 56/213 (26%), Positives = 76/213 (35%), Gaps = 42/213 (19%)
Query: 38 PTPTAPGPSPRRAPE-----------PPLLTLRPR--PGTLRAPGNAESP---------- 74
PT +AP P +AP PP T+ P+ P A SP
Sbjct: 1102 PTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSMT 1161
Query: 75 ----APRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPA---QTTN 127
AP+ RP P ++A + + +GS G P P P + T
Sbjct: 1162 YSLVAPKAQRPSPKAPQKVKAAIA---SIPVGSFEAGASGRPGPAPRQPLEPGPVREPTA 1218
Query: 128 PELELPADPAQPDPAPL---------SRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRT 178
PE EL P P P PL S P P PA + + +GP A P + R
Sbjct: 1219 PESELEGQPTPPAPPPLPETWTPTARSSPPLPPPAEERTSAKGPETMASKFPSSSSDWRV 1278
Query: 179 QGQSGPRESPRASPGSAAPAMASVRGPARDGAT 211
GQ +P S APA A G + + ++
Sbjct: 1279 PGQGLENRGEPPTPPSPAPAPAVAPGGSSESSS 1311
Score = 32.0 bits (71), Expect = 0.54
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 128 PELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRES 187
P A PA P P+P P P P+ S A P PP GQ G +
Sbjct: 1539 PPTGTAAAPA-PTPSPAGGPDPTSPSSDSGT------AQAAPPLPPPPESGPGQPGWEGA 1591
Query: 188 PRASPGSAAPAMAS 201
P+ SP P+ A+
Sbjct: 1592 PQPSPPPPGPSTAA 1605
Score = 28.1 bits (61), Expect = 7.8
Identities = 17/69 (24%), Positives = 22/69 (31%)
Query: 138 QPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAP 197
QP A P PP + P A G P +P + Q+ P P G P
Sbjct: 1527 QPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQP 1586
Query: 198 AMASVRGPA 206
P+
Sbjct: 1587 GWEGAPQPS 1595
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 53.1 bits (126), Expect = 2e-07
Identities = 49/172 (28%), Positives = 69/172 (40%), Gaps = 14/172 (8%)
Query: 40 PTAPGPSPRRAPEPPLLTLRPRPGTLRAPG---NAESPAPRRARPDLGRPWATRSAASPH 96
P PGP P+R PPL P G G A SP P+R P S A+P
Sbjct: 467 PPQPGPGPQRQG-PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPP 525
Query: 97 SKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQS 156
++ G + ++G P A P + +P+ + P +S PAPP+ +
Sbjct: 526 TQ---GQGRQSRPVAGGPGAPPAARPPASPSPQRQA-GPPQATRQTSVSGPAPPKASGAP 581
Query: 157 PAEEGPRGAAGGGPRTPP--AGRTQGQSGPRESPRASPGSAAPAMASVRGPA 206
P + +G P+ PP AG T+ S PR P + S GPA
Sbjct: 582 PGGQQRQGP----PQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPA 629
Score = 47.4 bits (111), Expect = 1e-05
Identities = 46/162 (28%), Positives = 57/162 (35%), Gaps = 14/162 (8%)
Query: 37 LPTPTAPGPSPRRAPEPPLL----TLRPRPGTLRAPGNAESPAPRRARPDLGRPWATR-- 90
LP+PT+ P PP RP G AP A PA + G P ATR
Sbjct: 508 LPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQT 567
Query: 91 SAASPHSKMWLGSHLRGGEMSGDPHTDL-PAHPAQTTNPELELPA-------DPAQPDPA 142
S + P G+ G + G P PA P + + +P P P
Sbjct: 568 SVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPG 627
Query: 143 PLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGP 184
P RP P S P AA GGP P + Q+ P
Sbjct: 628 PAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQP 669
Score = 41.2 bits (95), Expect = 9e-04
Identities = 53/190 (27%), Positives = 64/190 (33%), Gaps = 32/190 (16%)
Query: 35 RALPTPTAPGPSPRRA-----PEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWAT 89
+ALP SP R P P L L G + A PA +R P G P
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPGALPL----GRQTSQQPAGPPAQQRPPPQGGPP--- 468
Query: 90 RSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAP 149
P G + G P P Q L PA P P AP
Sbjct: 469 --QPGP-----------GPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAP 515
Query: 150 PRPAHQSPAEEGPRGA----AGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGP 205
+PA Q+ +G GGP PPA R P+ +A P A SV GP
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQR--QAGPPQAT-RQTSVSGP 572
Query: 206 ARDGATRSEP 215
A A+ + P
Sbjct: 573 APPKASGAPP 582
Score = 28.9 bits (63), Expect = 4.6
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 144 LSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRA-SPGSA 195
L RP PP P P P A GP T A R+ G + P SP A SPGS+
Sbjct: 25 LQRPQPPPPP---PGAHSP--GATPGPGTATAERSSGVA-PAASPAAPSPGSS 71
>gi|40787999 single-stranded DNA binding protein 2 [Homo sapiens]
Length = 361
Score = 53.1 bits (126), Expect = 2e-07
Identities = 53/181 (29%), Positives = 70/181 (38%), Gaps = 21/181 (11%)
Query: 4 QSLYKPVSPGRPCPPLFSAWEALSKVEGSE---------CRALPTPTAPGPSPRRAPEPP 54
Q P PG P PPL +AL V GS+ R P GP R P
Sbjct: 124 QPFMSPRYPGGPRPPLRIPNQALGGVPGSQPLLPSGMDPTRQQGHPNMGGPMQRMTPPRG 183
Query: 55 LLTLRPR--PGTLRAPGNA---ESPAPRRARPDLGRPW--ATRSAASPHSKMWLGSHLRG 107
++ L P+ G +R P NA P GRPW T + + P+S G+++
Sbjct: 184 MVPLGPQNYGGAMRPPLNALGGPGMPGMNMGPGGGRPWPNPTNANSIPYSSASPGNYVGP 243
Query: 108 GEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAG 167
G P T + PA +TN + P P +RP P P +GP G G
Sbjct: 244 PGGGGPPGTPIMPSPADSTNSGDNMYTLMNAVPPGP-NRPNFP----MGPGSDGPMGGLG 298
Query: 168 G 168
G
Sbjct: 299 G 299
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 52.4 bits (124), Expect = 4e-07
Identities = 58/178 (32%), Positives = 72/178 (40%), Gaps = 30/178 (16%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRP----GTLRAPGNAESPAPRRARPDLGRPWATRSAA 93
P P+ GP+ E P T PRP G A +E+P PR A P P A
Sbjct: 522 PGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEP-----AE 576
Query: 94 SPHSKMWLGSHLRGGEMSGDPHTDLPAH-PAQTTNPELELPADPAQPDPAPLSRPAP-PR 151
SP S G +G P D PA P++T P PA PA +PA P PR
Sbjct: 577 SP-------SETPGPSPAG-PTRDEPAESPSETPGPR---PAGPAGDEPAESPSETPGPR 625
Query: 152 PAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDG 209
PA PA + P + P PAG T R+ P + +A A V A+ G
Sbjct: 626 PA--GPAGDEPAESPSETPGPSPAGPT------RDEPAKAGEAAELQDAEVESSAKSG 675
Score = 45.8 bits (107), Expect = 4e-05
Identities = 42/132 (31%), Positives = 53/132 (40%), Gaps = 18/132 (13%)
Query: 108 GEMSGDPHTDLPAH-PAQTTNPELELPADPAQPDPAPLSRPAP-PRPAHQSPAEEGPRGA 165
G P D PA P++T P PA PA +PA P PRPA PA + P +
Sbjct: 523 GPSPAGPAGDEPAESPSETPGPR---PAGPAGDEPAESPSETPGPRPA--GPAGDEPAES 577
Query: 166 AGGGPRTPPAGRTQGQSGPRESPRASPG---------SAAPAMASVRGPARDGATRSEPH 216
P PAG T+ + P ESP +PG A + + GP G EP
Sbjct: 578 PSETPGPSPAGPTRDE--PAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPA 635
Query: 217 ATEIRTLEPQSA 228
+ T P A
Sbjct: 636 ESPSETPGPSPA 647
Score = 41.2 bits (95), Expect = 9e-04
Identities = 55/216 (25%), Positives = 74/216 (34%), Gaps = 31/216 (14%)
Query: 40 PTAPGPSPRRAPEPPLLTLRP--------RPGTLRAPGNAESPAPRRARPDLGRPWATRS 91
PT PGP E L L R GT G A + R LG A +
Sbjct: 396 PTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADK- 454
Query: 92 AASPHSKMWLGSHLRGGEMSGDPHT-DLPAHPAQTTNPELELPADPAQPDP--------- 141
K+ G+ SG T L PA + +P+ + + D
Sbjct: 455 -VRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEG 513
Query: 142 APLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPG-------- 193
P S P P+ PA + P + P PAG + P ESP +PG
Sbjct: 514 TPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDE--PAESPSETPGPRPAGPAG 571
Query: 194 -SAAPAMASVRGPARDGATRSEPHATEIRTLEPQSA 228
A + + GP+ G TR EP + T P+ A
Sbjct: 572 DEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPA 607
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 52.4 bits (124), Expect = 4e-07
Identities = 51/194 (26%), Positives = 77/194 (39%), Gaps = 16/194 (8%)
Query: 40 PTAPGPSPRRAPEPPLLTLRP--RPGTLRAPGN-AESPAPRRARPDLGRPWATRSAASPH 96
P++ P P+ +PP + P +PG + P +P P +P L P A +
Sbjct: 381 PSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSP-AKAPGPTKT 439
Query: 97 SKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQS 156
G + +G T A T P +LP PA+P P +P P +P Q
Sbjct: 440 PVQQPGPGKIPAQQAGPGKTS--AQQTGPTKPPSQLPG-PAKPPP---QQPGPAKPPPQQ 493
Query: 157 PAEEGPRGAAGGGPRTP-----PAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGAT 211
P P G + P PA + Q G + P PGSA P+ A PA+ A
Sbjct: 494 PGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPS-AQQPSPAKPSAQ 552
Query: 212 RSEPHATEIRTLEP 225
+S ++ + +P
Sbjct: 553 QSTKPVSQTGSGKP 566
Score = 39.3 bits (90), Expect = 0.003
Identities = 64/253 (25%), Positives = 93/253 (36%), Gaps = 40/253 (15%)
Query: 8 KPVSPGRPCPPLFSAWEALSKVE--GSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTL 65
KP P PP+ + G E ++ P P P P +P L +PGT+
Sbjct: 295 KPSLPSPSKPPIQQPTPGKPPAQQPGHE-KSQPGPAKPPAQPSGLTKP----LAQQPGTV 349
Query: 66 RAP----GNAESPAPRR--ARPDLGRPWATR-SAASPHSKMWLGSHLRGGEMSGDPHTDL 118
+ P G + PA A+P + + + S+ P K G + P
Sbjct: 350 KPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAK 409
Query: 119 PAHPAQTTNPELELPADPAQPDPA--------PLSRPAPPR-PAHQSPAEEGPRGAAGGG 169
P P Q L P PA P+ +P P + PA Q A G A G
Sbjct: 410 P--PTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQ--AGPGKTSAQQTG 465
Query: 170 PRTP------PAGRTQGQSGPRESPRASPGSAAPAM----ASVRGPARDGATR---SEPH 216
P P PA Q GP + P PGSA P ++ P + G + +P
Sbjct: 466 PTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPG 525
Query: 217 ATEIRTLEPQSAR 229
+T+ + +P SA+
Sbjct: 526 STKPPSQQPGSAK 538
Score = 38.9 bits (89), Expect = 0.004
Identities = 53/229 (23%), Positives = 83/229 (36%), Gaps = 53/229 (23%)
Query: 28 KVEGSECRALPTPTA-------PGPSP-------------RRAPEPPLLTLRPRPGTLRA 67
KV + +A+P P + PGPS + P+ + P+P
Sbjct: 812 KVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPM 871
Query: 68 PGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTN 127
P SP P RP G+ T + + L G ++ P + P P +T
Sbjct: 872 PKG--SPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQ-PTTPQETVT 928
Query: 128 PEL------------ELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPA 175
+L L + QP P S+ P P Q+PA P + G PP
Sbjct: 929 GKLFGFGASIFSQASNLISTAGQPGPH--SQSGPGAPMKQAPAPSQPPTSQG-----PP- 980
Query: 176 GRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLE 224
++ GQ+ P +P + P + PA A + EP A + T++
Sbjct: 981 -KSTGQAPP------APAKSIPVKKETKAPA---AEKLEPKAEQAPTVK 1019
Score = 35.8 bits (81), Expect = 0.037
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 25/187 (13%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHS 97
P P GP +P P+ + + P +S P +P G T++ + H+
Sbjct: 218 PIPKQQGPGR----DPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQG---PTQTPQTDHA 270
Query: 98 KMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSP 157
K+ L R D+ ++ P L P+ P P P +P +P H+
Sbjct: 271 KLPLQ---RDASRPQTKQADIVR--GESVKPSLPSPSKPPIQQPTP-GKPPAQQPGHEK- 323
Query: 158 AEEGPRGAAGGGPRTPPAGRTQ---GQSGPRESPRASPGSAAPAMASVRGPARDGA--TR 212
++ GP P P+G T+ Q G + P PG+ P A GPA+ A T
Sbjct: 324 SQPGP-----AKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPP-AQPLGPAKPPAQQTG 377
Query: 213 SEPHATE 219
SE ++E
Sbjct: 378 SEKPSSE 384
Score = 32.7 bits (73), Expect = 0.32
Identities = 46/190 (24%), Positives = 71/190 (37%), Gaps = 52/190 (27%)
Query: 35 RALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAAS 94
RAL AP PS +P+P L T P T + + SP P++ P + A+
Sbjct: 644 RALGGDLAPVPS---SPQPKLKTA---PVTTTSAVSKSSPQPQQTSP--------KKDAA 689
Query: 95 PHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELE-LPADPAQ--PDPAPLSRPAPPR 151
P ++S P P P P L P+ A+ P+ LS+PAPP+
Sbjct: 690 PKQ-----------DLSKAPEPKKP--PPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPK 736
Query: 152 PAHQSPAEEGPRGAAGGGPRTP---------------------PAGRTQGQSGPRESPRA 190
P+E+ A P+ P P+ + Q Q+ + +P
Sbjct: 737 EP-SVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPL 795
Query: 191 SPGSAAPAMA 200
SA P+ +
Sbjct: 796 KTDSAKPSQS 805
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 111 SGDPH-TDLPAHPAQT-TNPELELPADPAQPDPAPLSRPAPPRPAHQSP 157
SG P + LPA P + L++ A P P P P P PP P P
Sbjct: 2378 SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPP 2426
Score = 28.9 bits (63), Expect = 4.6
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 117 DLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRP 152
D+ A P P P P P P PL P P+P
Sbjct: 2400 DISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKP 2435
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 52.4 bits (124), Expect = 4e-07
Identities = 51/194 (26%), Positives = 77/194 (39%), Gaps = 16/194 (8%)
Query: 40 PTAPGPSPRRAPEPPLLTLRP--RPGTLRAPGN-AESPAPRRARPDLGRPWATRSAASPH 96
P++ P P+ +PP + P +PG + P +P P +P L P A +
Sbjct: 381 PSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSP-AKAPGPTKT 439
Query: 97 SKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQS 156
G + +G T A T P +LP PA+P P +P P +P Q
Sbjct: 440 PVQQPGPGKIPAQQAGPGKTS--AQQTGPTKPPSQLPG-PAKPPP---QQPGPAKPPPQQ 493
Query: 157 PAEEGPRGAAGGGPRTP-----PAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGAT 211
P P G + P PA + Q G + P PGSA P+ A PA+ A
Sbjct: 494 PGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPS-AQQPSPAKPSAQ 552
Query: 212 RSEPHATEIRTLEP 225
+S ++ + +P
Sbjct: 553 QSTKPVSQTGSGKP 566
Score = 39.3 bits (90), Expect = 0.003
Identities = 64/253 (25%), Positives = 93/253 (36%), Gaps = 40/253 (15%)
Query: 8 KPVSPGRPCPPLFSAWEALSKVE--GSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTL 65
KP P PP+ + G E ++ P P P P +P L +PGT+
Sbjct: 295 KPSLPSPSKPPIQQPTPGKPPAQQPGHE-KSQPGPAKPPAQPSGLTKP----LAQQPGTV 349
Query: 66 RAP----GNAESPAPRR--ARPDLGRPWATR-SAASPHSKMWLGSHLRGGEMSGDPHTDL 118
+ P G + PA A+P + + + S+ P K G + P
Sbjct: 350 KPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAK 409
Query: 119 PAHPAQTTNPELELPADPAQPDPA--------PLSRPAPPR-PAHQSPAEEGPRGAAGGG 169
P P Q L P PA P+ +P P + PA Q A G A G
Sbjct: 410 P--PTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQ--AGPGKTSAQQTG 465
Query: 170 PRTP------PAGRTQGQSGPRESPRASPGSAAPAM----ASVRGPARDGATR---SEPH 216
P P PA Q GP + P PGSA P ++ P + G + +P
Sbjct: 466 PTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPG 525
Query: 217 ATEIRTLEPQSAR 229
+T+ + +P SA+
Sbjct: 526 STKPPSQQPGSAK 538
Score = 38.9 bits (89), Expect = 0.004
Identities = 53/229 (23%), Positives = 83/229 (36%), Gaps = 53/229 (23%)
Query: 28 KVEGSECRALPTPTA-------PGPSP-------------RRAPEPPLLTLRPRPGTLRA 67
KV + +A+P P + PGPS + P+ + P+P
Sbjct: 812 KVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPM 871
Query: 68 PGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTN 127
P SP P RP G+ T + + L G ++ P + P P +T
Sbjct: 872 PKG--SPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQ-PTTPQETVT 928
Query: 128 PEL------------ELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPA 175
+L L + QP P S+ P P Q+PA P + G PP
Sbjct: 929 GKLFGFGASIFSQASNLISTAGQPGPH--SQSGPGAPMKQAPAPSQPPTSQG-----PP- 980
Query: 176 GRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLE 224
++ GQ+ P +P + P + PA A + EP A + T++
Sbjct: 981 -KSTGQAPP------APAKSIPVKKETKAPA---AEKLEPKAEQAPTVK 1019
Score = 35.8 bits (81), Expect = 0.037
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 25/187 (13%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHS 97
P P GP +P P+ + + P +S P +P G T++ + H+
Sbjct: 218 PIPKQQGPGR----DPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQG---PTQTPQTDHA 270
Query: 98 KMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSP 157
K+ L R D+ ++ P L P+ P P P +P +P H+
Sbjct: 271 KLPLQ---RDASRPQTKQADIVR--GESVKPSLPSPSKPPIQQPTP-GKPPAQQPGHEK- 323
Query: 158 AEEGPRGAAGGGPRTPPAGRTQ---GQSGPRESPRASPGSAAPAMASVRGPARDGA--TR 212
++ GP P P+G T+ Q G + P PG+ P A GPA+ A T
Sbjct: 324 SQPGP-----AKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPP-AQPLGPAKPPAQQTG 377
Query: 213 SEPHATE 219
SE ++E
Sbjct: 378 SEKPSSE 384
Score = 32.7 bits (73), Expect = 0.32
Identities = 46/190 (24%), Positives = 71/190 (37%), Gaps = 52/190 (27%)
Query: 35 RALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAAS 94
RAL AP PS +P+P L T P T + + SP P++ P + A+
Sbjct: 644 RALGGDLAPVPS---SPQPKLKTA---PVTTTSAVSKSSPQPQQTSP--------KKDAA 689
Query: 95 PHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELE-LPADPAQ--PDPAPLSRPAPPR 151
P ++S P P P P L P+ A+ P+ LS+PAPP+
Sbjct: 690 PKQ-----------DLSKAPEPKKP--PPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPK 736
Query: 152 PAHQSPAEEGPRGAAGGGPRTP---------------------PAGRTQGQSGPRESPRA 190
P+E+ A P+ P P+ + Q Q+ + +P
Sbjct: 737 EP-SVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPL 795
Query: 191 SPGSAAPAMA 200
SA P+ +
Sbjct: 796 KTDSAKPSQS 805
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 111 SGDPH-TDLPAHPAQT-TNPELELPADPAQPDPAPLSRPAPPRPAHQSP 157
SG P + LPA P + L++ A P P P P P PP P P
Sbjct: 2378 SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPP 2426
Score = 28.9 bits (63), Expect = 4.6
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 117 DLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRP 152
D+ A P P P P P P PL P P+P
Sbjct: 2400 DISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKP 2435
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 52.4 bits (124), Expect = 4e-07
Identities = 61/200 (30%), Positives = 80/200 (40%), Gaps = 42/200 (21%)
Query: 36 ALPTPT---APGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSA 92
A+PTP AP P+P AP P L + + T +E P PR A P + R +
Sbjct: 503 AVPTPATTPAPAPAPAPAPAPALASAATKERT-----ESEVP-PRPASPKVTR--SPPET 554
Query: 93 ASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRP 152
A+P M T PA PA+ T P ++ + P PAP P PP
Sbjct: 555 AAPVEDM-------------ARRTKRPA-PARPTMPPPQVSGSRSSP-PAP---PLPPGS 596
Query: 153 AHQSPAEEGPRGAAGGG----------PRTPPA-GRTQGQSGPRESPRASPGSAAPAMAS 201
+ PR G P TPP R Q + P ASPG A+P+ S
Sbjct: 597 GSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVS 656
Query: 202 VRGPARD--GATRSEPHATE 219
+ PA+ GA +E A E
Sbjct: 657 LSNPAQVDLGAATAEGGAPE 676
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 52.0 bits (123), Expect = 5e-07
Identities = 71/245 (28%), Positives = 91/245 (37%), Gaps = 56/245 (22%)
Query: 4 QSLYKPVS--PGRPCPP------LFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPL 55
QS+ +P S P PCPP L + +++ + P PTAPGP P+PPL
Sbjct: 808 QSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGP-----PQPPL 862
Query: 56 LTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPH 115
RP+ + P PAP P +T SA + S+ S D
Sbjct: 863 ---RPQS---QPPEGPLPPAPHLP------PSSTSSAVASSSET---SSRLPAPTPSDFQ 907
Query: 116 TDLPA----HPAQTTNPELELPADPAQPDPAP--------LSRPAPPRPA------HQSP 157
P H + T P L L +PA P P P PA P+P HQ P
Sbjct: 908 LQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQVP 967
Query: 158 AEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRAS-------PGSAAPAMASVRGPARDGA 210
+ + AGG P P +T GP SP AS P A + PA A
Sbjct: 968 SGIILQNKAGGAPAAP---QTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMAA 1024
Query: 211 TRSEP 215
T P
Sbjct: 1025 TGLPP 1029
Score = 44.3 bits (103), Expect = 1e-04
Identities = 46/210 (21%), Positives = 72/210 (34%), Gaps = 24/210 (11%)
Query: 9 PVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAP 68
P P P+ + S+ P P P +P + P P P L
Sbjct: 729 PAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPL--G 786
Query: 69 GNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNP 128
+ P+P RP P +S + P S+ P P A T P
Sbjct: 787 DSPHLPSPHPTRPPSRPPSRPQSVSRPPSE--------------PPLHPCPPPQAPPTLP 832
Query: 129 EL-----ELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSG 183
+ +L P +PAP + P PP+P + P + P G P PP+ + +
Sbjct: 833 GIFVIQNQLGVPPPASNPAP-TAPGPPQPPLR-PQSQPPEGPLPPAPHLPPSSTSSAVAS 890
Query: 184 PRESPRASPGSAAPAMASVRGPARDGATRS 213
E+ P + P+ ++ P G +S
Sbjct: 891 SSETSSRLP-APTPSDFQLQFPPSQGPHKS 919
Score = 42.7 bits (99), Expect = 3e-04
Identities = 52/223 (23%), Positives = 70/223 (31%), Gaps = 36/223 (16%)
Query: 10 VSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPG 69
V P PP S L + +A P AP +P+ A P T +P PG +P
Sbjct: 621 VQPAPQAPPAVSTPLPLGL---QQPQAQQPPQAP--TPQAAAPPQATTPQPSPGLASSPE 675
Query: 70 NAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPE 129
P A P T +M+L + P P
Sbjct: 676 KIVLGQPPSATP-------TAILTQDSLQMFLPQ-------------ERSQQPLSAEGPH 715
Query: 130 LELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTP--PAGRTQGQSGPRES 187
L +PA P P PAP P + AG GP+ P A P +
Sbjct: 716 LSVPASVIVSAPPPAQDPAPATPVAK---------GAGLGPQAPDSQASPAPAPQIPAAA 766
Query: 188 PRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARS 230
P PG ++ + P D PH T + P +S
Sbjct: 767 PLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQS 809
Score = 30.8 bits (68), Expect = 1.2
Identities = 52/224 (23%), Positives = 72/224 (32%), Gaps = 61/224 (27%)
Query: 12 PGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPR-RAPEPPLLTLRPR--------- 61
P RP PP + V+ P P AP P AP P L LR
Sbjct: 1346 PPRPPPPPPPTGQMNGTVDH------PPPAAPERKPLGTAPHCPRLPLRKTYRENVGGPG 1399
Query: 62 --PGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRG---------GEM 110
GT SPAP A+ D R A+ +++ L+G +
Sbjct: 1400 APEGTPAGRARGGSPAPLPAKVDEATSGLIRELAAVEDELYQRM-LKGPPPEPAASAAQG 1458
Query: 111 SGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPP-------------------R 151
+GDP + P P P ++ D A S +P +
Sbjct: 1459 TGDPDWEAPGLP-----PAKRRKSESPDVDQASFSSDSPQDDTLTEHLQSAIDSILNLQQ 1513
Query: 152 PAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSA 195
++PA P A+ G P +PP P P A P S+
Sbjct: 1514 APGRTPAPSYPHAASAGTPASPP---------PLHRPEAYPPSS 1548
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 51.6 bits (122), Expect = 7e-07
Identities = 65/254 (25%), Positives = 87/254 (34%), Gaps = 50/254 (19%)
Query: 15 PCPPL--FSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAE 72
PC L +S W + E + + P AP SP PP ++PRP PG+
Sbjct: 81 PCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSE-PTPGSEA 139
Query: 73 SPAPRRARPDLGRPWAT--RSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPEL 130
P P RP+A R + +P W GDP + P P + P
Sbjct: 140 LP-PGSLPEGEPRPYALPPRESPAPRPFRW-----------GDPFSPAPPRPQPPSRPAA 187
Query: 131 ELPADPAQPDPAPLSRPAPPRP-------AHQSPAEEGPRGAAGGGPRTPPAGRTQGQS- 182
+ P+ PA P P+ P P R Q+P + G R P +G+
Sbjct: 188 QPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGG 247
Query: 183 ------------------GPRESPRASPGSAAPAMASVRGPARDGATRSEPHATEIRTLE 224
GP PR G P +A + AR RS P + T
Sbjct: 248 LLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLAR-VCVRSLPGNRRLAT-- 304
Query: 225 PQSARSCCLAAPWQ 238
RSC A P Q
Sbjct: 305 ----RSCPAAFPLQ 314
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 51.6 bits (122), Expect = 7e-07
Identities = 48/160 (30%), Positives = 58/160 (36%), Gaps = 16/160 (10%)
Query: 71 AESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPEL 130
A + +P PD P A+P LG+ ++ G P P A PE
Sbjct: 719 AHAGSPSLKTPDGPVPGPGPQGAAPEP---LGASVQRDSAQGRP---CPPPQAPANQPEG 772
Query: 131 ELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRA 190
A P P PAP ++ A P Q PAE P G A GG R G T GPR P+
Sbjct: 773 ASSAAPGSPVPAPPTK-ASALPVEQGPAEPIPPGVASGGLRPDALGPTTAHHGPRHPPKP 831
Query: 191 SPGSAAPAMASVRGPARDGATRSEPHATEIRTLEPQSARS 230
A R G P AT + QS S
Sbjct: 832 PRSKAT---------ERPGQEPEGPGATPAGERDDQSPDS 862
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 51.2 bits (121), Expect = 9e-07
Identities = 56/196 (28%), Positives = 70/196 (35%), Gaps = 18/196 (9%)
Query: 8 KPVSPGRPCPPLFSAW--EALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRPGTL 65
+P SPG CP F A + L ++G +P PGP P P PG
Sbjct: 1089 EPGSPG--CPGHFGASGEQGLPGIQGPR----GSPGRPGPPGSSGP-PGCPGDHGMPGLR 1141
Query: 66 RAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSH----LRGGEMSGDPHTDLPAH 121
PG P PR + D G P S G H +G + + H P
Sbjct: 1142 GQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPG 1201
Query: 122 PAQTTNPELEL--PADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQ 179
P + E P P P P + PP P S GP GA G P+ P
Sbjct: 1202 PVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSS-GPPGPAGATGRAPKDIPDPGPP 1260
Query: 180 GQSGP--RESPRASPG 193
G GP + PR +PG
Sbjct: 1261 GDQGPPGPDGPRGAPG 1276
Score = 41.6 bits (96), Expect = 7e-04
Identities = 62/229 (27%), Positives = 72/229 (31%), Gaps = 53/229 (23%)
Query: 13 GRPCPPLFSAWEALSKVEGSECRALPTPTAPGPS-------PRRAPEPPLLT-----LRP 60
G P PP S + G + +P P PG PR AP PP L LR
Sbjct: 1230 GPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRG 1289
Query: 61 RPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMS--GDPHTDL 118
PG PG P P P K + G + G+ G P
Sbjct: 1290 EPGDCGLPGPPGPPGP---------------PGPPGYKGFPGCDGKDGQKGPVGFPGPQG 1334
Query: 119 PAHPAQTTNPELELPADPAQPDPA----PLSRPAPPRPAHQ---------SPAEEGPRGA 165
P H E LP P + P P P PP +P GP GA
Sbjct: 1335 P-HGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGPEGA 1393
Query: 166 AG-GGPRTPPAGRTQGQSG--PRESPRASPGSAAPAMASVRGPARDGAT 211
G G R P +G+ G R PGS P P R G T
Sbjct: 1394 MGLPGMRGPSGPGCKGEPGLDGRRGVDGVPGSPGP-------PGRKGDT 1435
Score = 37.0 bits (84), Expect = 0.017
Identities = 44/142 (30%), Positives = 49/142 (34%), Gaps = 31/142 (21%)
Query: 61 RPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPA 120
RPGT PG AE P P R D+G P GGE P P
Sbjct: 708 RPGT---PGTAEIPGPPGFRGDMGDPGF------------------GGEKGSSP-VGPPG 745
Query: 121 HPAQT-TNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAG--R 177
P N + +P DPA P + R P +GPRG G PAG
Sbjct: 746 PPGSPGVNGQKGIPGDPAFGHLGPPGK----RGLSGVPGIKGPRGDPGCPGAEGPAGIPG 801
Query: 178 TQGQSGP--RESPRASPGSAAP 197
G GP RE PG P
Sbjct: 802 FLGLKGPKGREGHAGFPGVPGP 823
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 50.8 bits (120), Expect = 1e-06
Identities = 40/129 (31%), Positives = 45/129 (34%), Gaps = 28/129 (21%)
Query: 45 PSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSH 104
P P R PE P R P R P AE PAPR P RS A P S+
Sbjct: 23 PGPEREPEYPREPPRLEPQPYREPARAEPPAPREPAP--------RSDAQPPSR------ 68
Query: 105 LRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRG 164
LP P + L +P +P+P P P PP P P E
Sbjct: 69 ----------EKPLPQREVSRAEPPMSLQREPPRPEPPP---PFPPLPLQPPPPRES-AS 114
Query: 165 AAGGGPRTP 173
A PR P
Sbjct: 115 RAEQPPRPP 123
Score = 38.5 bits (88), Expect = 0.006
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 129 ELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQ------GQS 182
E E P +P + +P P PA P +P E PR A R P + + S
Sbjct: 28 EPEYPREPPRLEPQPYREPARAEPP--APREPAPRSDAQPPSREKPLPQREVSRAEPPMS 85
Query: 183 GPRESPRASPGSAAPAMASVRGPARDGATRSE 214
RE PR P P + P R+ A+R+E
Sbjct: 86 LQREPPRPEPPPPFPPLPLQPPPPRESASRAE 117
Score = 37.7 bits (86), Expect = 0.010
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 27/228 (11%)
Query: 3 SQSLYKPVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRP 62
SQ + VS P S + A + V + +P + SP+ A P T P+P
Sbjct: 993 SQGSHPLVSRTVPSTTTSSNYLAKAMVSQISTQGFKSPFSMAASPKLAASPKPAT-SPKP 1051
Query: 63 GTLRAPGNAESPAPR-RARPDLG-----------RPWATRSAASPHSKMWLGSHLRGGEM 110
L +P + SP P A+P + +P + S++SP++ + GSH
Sbjct: 1052 --LPSPKPSASPKPSLSAKPSVSTKLISKSNPTPKPTVSPSSSSPNALVAQGSH------ 1103
Query: 111 SGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGP 170
T+ P H Q + + + P+ + PP Q+P++ + G
Sbjct: 1104 ---SSTNSPVHK-QPSGMNISRQSPTLNLLPSSRTSGLPPTKNLQAPSKLTNSSSTGTVG 1159
Query: 171 RTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATR--SEPH 216
+ +G R S S G+ +++ G GAT+ S PH
Sbjct: 1160 KNSLSGIAMNVPASRGSNLNSSGANRTSLSGGTGSGTQGATKPLSTPH 1207
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 50.8 bits (120), Expect = 1e-06
Identities = 53/177 (29%), Positives = 64/177 (36%), Gaps = 22/177 (12%)
Query: 38 PTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRP-------WATR 90
PT AP PR P+ P +PG AP P P R R D G P WA R
Sbjct: 449 PTEAAP---PRSGPQSPAPAAPAQPGATLAP-----PTPPRPR-DGGTPRHSRALSWAAR 499
Query: 91 SAASPHSKMWLGSHLRGGEMSGDPHTDLP-AHPAQTTNPELELPADPAQPDPAPLSRPAP 149
+A + R P + P Q +P P P P P P P
Sbjct: 500 AARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRP 559
Query: 150 -PRPAHQSPAE-EGPRGAAGGGPRTP---PAGRTQGQSGPRESPRASPGSAAPAMAS 201
PR ++P P G GGP+ P R Q G RE + G AAP + S
Sbjct: 560 LPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDS 616
Score = 35.0 bits (79), Expect = 0.063
Identities = 33/109 (30%), Positives = 42/109 (38%), Gaps = 12/109 (11%)
Query: 135 DPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGS 194
D +P A R P PA +PA+ G A P TPP R G PR S S +
Sbjct: 445 DSLEPTEAAPPRSGPQSPAPAAPAQPG----ATLAPPTPPRPRDGGT--PRHSRALSWAA 498
Query: 195 AA----PAMASVRGPARDGATRSEP--HATEIRTLEPQSARSCCLAAPW 237
A P P R + P + T +R + S R+ APW
Sbjct: 499 RAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPW 547
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 50.8 bits (120), Expect = 1e-06
Identities = 41/108 (37%), Positives = 52/108 (48%), Gaps = 19/108 (17%)
Query: 110 MSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGG 169
M D H + A PA+T + A PAQ PA + P PA SPA+ P G
Sbjct: 1 MERDSHGN--ASPARTPSAG----ASPAQASPAG-TPPGRASPAQASPAQASPAG----- 48
Query: 170 PRTPPAGRTQGQSGPRESP--RASPGSAAPAMASVRGPARDGATRSEP 215
TPP + Q+ P +P RASPG A+PA AS PA+ R+ P
Sbjct: 49 --TPPGRASPAQASPAGTPPGRASPGRASPAQAS---PAQASPARASP 91
Score = 45.1 bits (105), Expect = 6e-05
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 134 ADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESP--RAS 191
A PAQ PA S PA P SPA+ P G TPP + G++ P ++ +AS
Sbjct: 34 ASPAQASPAQAS-PAGTPPGRASPAQASPAG-------TPPGRASPGRASPAQASPAQAS 85
Query: 192 PGSAAPAMASVRGPARDGATRSEPHATEIRTLEP 225
P A+PA+AS+ +R + RS + T P
Sbjct: 86 PARASPALASL---SRSSSGRSSSARSASVTTSP 116
Score = 40.4 bits (93), Expect = 0.002
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 147 PAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRG-- 204
PA A SPA+ P G G R PA + Q+ P +P PG A+PA AS G
Sbjct: 11 PARTPSAGASPAQASPAGTPPG--RASPAQASPAQASPAGTP---PGRASPAQASPAGTP 65
Query: 205 PARDGATRSEPHATEIRTLEPQSARSCCLAAPWQVTWGRNAGRRRDS 251
P R R+ P P A S LA+ + + GR++ R S
Sbjct: 66 PGRASPGRASPAQASPAQASPARA-SPALASLSRSSSGRSSSARSAS 111
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 50.1 bits (118), Expect = 2e-06
Identities = 63/221 (28%), Positives = 80/221 (36%), Gaps = 27/221 (12%)
Query: 8 KPVSPGRPCPPLFSAWEALSKVEGSECR-ALPT----PTAPGPSPRRAPEPPLLTLRPRP 62
KP +P P+ S S + ALPT P P P R P ++ P
Sbjct: 371 KPSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRPAEKPIQRNP 430
Query: 63 GTLRAPGNAESPAP------RRARPDLGRPWA--TRSAASPHSKMWLGSHLRGGEMSGDP 114
G R P + P P ++ P L R A T A+ P S R P
Sbjct: 431 GMPRPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASA-------RTSTHKPPP 483
Query: 115 HTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPP 174
T L + PA T P P P S + PR A PA P G+A G + P
Sbjct: 484 FTALSSSPAPT--PGSTRSTRPPATMVPPTSGTSTPRTA---PAVPTP-GSAPTGSKKPI 537
Query: 175 AGRTQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEP 215
++GP+ SPR P P A+ P D TR P
Sbjct: 538 GSEASKKAGPKSSPR-KPVPLRPGKAARDVPLSDLTTRPSP 577
Score = 47.8 bits (112), Expect = 9e-06
Identities = 60/206 (29%), Positives = 75/206 (36%), Gaps = 33/206 (16%)
Query: 36 ALPTPTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSA--A 93
AL + AP P R+ PP + P GT P P A +P + ++ A
Sbjct: 486 ALSSSPAPTPGSTRSTRPPATMVPPTSGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKA 545
Query: 94 SPHSKMWLGSHLRGGEMSGD-PHTDLPA-------HPAQTTNPELEL-PADPAQPDPAPL 144
P S LR G+ + D P +DL P+Q T P L L PA P P
Sbjct: 546 GPKSSPRKPVPLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPT 605
Query: 145 S--------RPAPPRPAHQSPAEEGPRGAAG--GGPRTPPAGRTQGQSGPR--ESPRASP 192
S + P P P GP+G G G P P G GPR P +P
Sbjct: 606 SSGYSIFHLAGSTPFPLLMGP--PGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGPYGNP 663
Query: 193 GSAAPAMASVR--------GPARDGA 210
G P A + G A DGA
Sbjct: 664 GLPGPPGAKGQKGDPGLSPGKAHDGA 689
Score = 33.9 bits (76), Expect = 0.14
Identities = 30/102 (29%), Positives = 36/102 (35%), Gaps = 24/102 (23%)
Query: 129 ELELPADPAQPD-PAPLSRPAPPRPAHQSPAEEGPRGAAG----------GGPRTPPAGR 177
E+ +P DP P P P P +P G +G G GP PP +
Sbjct: 1268 EMGVPGDPGPPGTPGPKGSRGSLGPTG-APGRMGAQGEPGLAGYDGHKGIVGPLGPPGPK 1326
Query: 178 ----TQGQSGPRESPRASPGSAAPAMASVRGPARDGATRSEP 215
QG+ G E P PG RGP D R EP
Sbjct: 1327 GEKGEQGEDGKAEGPPGPPGD--------RGPVGDRGDRGEP 1360
Score = 28.9 bits (63), Expect = 4.6
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 157 PAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGP 205
P + GP G G RT G QG+ G + P S P MA + GP
Sbjct: 1498 PGQLGPPGKRGTEGRTGLPGN-QGEPGSKGQPGDSGEMGFPGMAGLFGP 1545
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 50.1 bits (118), Expect = 2e-06
Identities = 57/210 (27%), Positives = 80/210 (38%), Gaps = 19/210 (9%)
Query: 1 MASQSLYKPVSPGRPCPPLFSAWEAL---SKVEGSECRALPTPTAPGPSPRRAPEPPLLT 57
M +Q L +SP P P + E S V LP+P P+ +PEPP
Sbjct: 132 METQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSV 191
Query: 58 LRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTD 117
+ A P+P +P P + ++ S + K SH E G P
Sbjct: 192 -----PVCESQKLAPVPSPEPQKPAPVSPESVKATLS-NPKPQKQSHFP--ETLGPPSAS 243
Query: 118 LPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEE----GPRGAAGGGPRTP 173
P P +PE P+ A P+ +R P P SP+E P A PR P
Sbjct: 244 SPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRP 303
Query: 174 PAGRTQG--QSGPRESPRASPGSAAPAMAS 201
+ G + GP SPR P + P+ +S
Sbjct: 304 APAVSPGSWKPGPPGSPR--PWKSNPSASS 331
Score = 38.9 bits (89), Expect = 0.004
Identities = 63/249 (25%), Positives = 87/249 (34%), Gaps = 52/249 (20%)
Query: 3 SQSLYKPVSPGRPCPPLFSAWEALSKVEGSECRALPTPTAPGPSPRRAPEPPLLTLRPRP 62
S +KP PG P P W++ + P P PS P P+ ++ P P
Sbjct: 308 SPGSWKPGPPGSPRP-----WKSNPSASSGPWK----PAKPAPSVSPGPWKPIPSVSPGP 358
Query: 63 GTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDPHTDLPAH- 121
P + S A ++ W + ASP S W E+ T P H
Sbjct: 359 WK---PTPSVSSASWKSSSVSPSSWKS-PPASPES--WKSGP---PELRKTAPTLSPEHW 409
Query: 122 -PAQTTNPELELPADPAQPD-PAPLSRPAPPRPAHQ-------------SPAE----EGP 162
+PEL P P P+ +P P +P+ SPA E
Sbjct: 410 KAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPESQ 469
Query: 163 RGAAGGGP-----------RTP--PAGRTQGQSGPRESPRASPGSAAPAMASVRGPARDG 209
+ + GG P + P P R G SGP ESP+A+ P + S+ R
Sbjct: 470 KSSRGGSPDLWKSSFFIEPQKPVFPETRKPGPSGPSESPKAASDIWKPVL-SIDTEPRKP 528
Query: 210 ATRSEPHAT 218
A EP T
Sbjct: 529 ALFPEPAKT 537
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 50.1 bits (118), Expect = 2e-06
Identities = 47/170 (27%), Positives = 60/170 (35%), Gaps = 14/170 (8%)
Query: 37 LPTPTAPGPSPRRAPEPPLL----TLRPRPGTLRAPGNAESPAPRRARPDLGRPWATR-- 90
LP+PT+ P PP RP G AP A PA + G P ATR
Sbjct: 508 LPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQT 567
Query: 91 SAASPHSKMWLGSHLRGGEMSGDPHTDL-PAHPAQTTNPELELPA-------DPAQPDPA 142
S + P G+ G + G P PA P + + +P P P
Sbjct: 568 SVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPG 627
Query: 143 PLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASP 192
P RP P S P AA GGP P ++Q + P +P
Sbjct: 628 PAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFNLPEPAP 677
Score = 44.7 bits (104), Expect = 8e-05
Identities = 47/171 (27%), Positives = 60/171 (35%), Gaps = 33/171 (19%)
Query: 40 PTAPGPSPRRAPEPPLLTLRPRPGTLRAPG---NAESPAPRRARPDLGRPWATRSAASPH 96
P PGP P+R PPL P G G A SP P+R P S A+P
Sbjct: 467 PPQPGPGPQRQG-PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPP 525
Query: 97 SKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQS 156
++ G + ++G P A P PA P P Q+
Sbjct: 526 TQ---GQGRQSRPVAGGPGAPPAARP------------------------PASPSPQRQA 558
Query: 157 PAEEGPRGAAGGGPRTPPA-GRTQGQSGPRESPRASPGSAAPA-MASVRGP 205
+ R + GP P A G G + P+ PG A P AS GP
Sbjct: 559 GPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGP 609
Score = 41.2 bits (95), Expect = 9e-04
Identities = 53/190 (27%), Positives = 64/190 (33%), Gaps = 32/190 (16%)
Query: 35 RALPTPTAPGPSPRRA-----PEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWAT 89
+ALP SP R P P L L G + A PA +R P G P
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPGALPL----GRQTSQQPAGPPAQQRPPPQGGPP--- 468
Query: 90 RSAASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELELPADPAQPDPAPLSRPAP 149
P G + G P P Q L PA P P AP
Sbjct: 469 --QPGP-----------GPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAP 515
Query: 150 PRPAHQSPAEEGPRGA----AGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGP 205
+PA Q+ +G GGP PPA R P+ +A P A SV GP
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQR--QAGPPQAT-RQTSVSGP 572
Query: 206 ARDGATRSEP 215
A A+ + P
Sbjct: 573 APPKASGAPP 582
Score = 33.9 bits (76), Expect = 0.14
Identities = 42/185 (22%), Positives = 58/185 (31%), Gaps = 55/185 (29%)
Query: 12 PGRPCPPLFSAWEALSKVEGSECRALPTPTAPG----------PSPRRAPEPPLLTLR-- 59
P P A +A +G ++ P PG PSP+R PP T +
Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS 568
Query: 60 -----PRPGTLRAPGNAESPAPRRARPDLGRPWATRSAASPHSKMWLGSHLRGGEMSGDP 114
P + PG + P + P P S A P + +G P
Sbjct: 569 VSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPR------------TGPP 616
Query: 115 HTDLP--AHPAQTTNPELELPADPAQPDPAP------------------------LSRPA 148
T P + P P+ +L P+Q P P L PA
Sbjct: 617 TTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFNLPEPA 676
Query: 149 PPRPA 153
PPRP+
Sbjct: 677 PPRPS 681
Score = 28.9 bits (63), Expect = 4.6
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 144 LSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRA-SPGSA 195
L RP PP P P P A GP T A R+ G + P SP A SPGS+
Sbjct: 25 LQRPQPPPPP---PGAHSP--GATPGPGTATAERSSGVA-PAASPAAPSPGSS 71
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,865,179
Number of Sequences: 37866
Number of extensions: 1210654
Number of successful extensions: 19588
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 2031
Number of HSP's that attempted gapping in prelim test: 9021
Number of HSP's gapped (non-prelim): 8292
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.