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Search of human proteins with 169169586
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
(251 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 529 e-150
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 223 1e-58
gi|239754245 PREDICTED: hypothetical protein [Homo sapiens] 185 3e-47
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 59 3e-09
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 59 3e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 55 6e-08
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 55 6e-08
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 55 8e-08
gi|7706501 WW domain binding protein 11 [Homo sapiens] 55 8e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 54 1e-07
gi|33356148 formin-like 1 [Homo sapiens] 54 1e-07
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 53 2e-07
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 52 5e-07
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso... 52 5e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 6e-07
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 51 8e-07
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 51 8e-07
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 51 1e-06
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 51 1e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 51 1e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 51 1e-06
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 51 1e-06
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 51 1e-06
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 50 1e-06
gi|19924099 synapsin I isoform Ia [Homo sapiens] 50 1e-06
gi|19924097 synapsin I isoform Ib [Homo sapiens] 50 1e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 50 1e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 50 1e-06
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 50 2e-06
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 50 2e-06
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 529 bits (1362), Expect = e-150
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MIRKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA 60
MIRKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA
Sbjct: 1 MIRKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA 60
Query: 61 GAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPG 120
GAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPG
Sbjct: 61 GAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPG 120
Query: 121 KGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLR 180
KGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLR
Sbjct: 121 KGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLR 180
Query: 181 GLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSS 240
GLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSS
Sbjct: 181 GLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSS 240
Query: 241 LERRPAHSSRS 251
LERRPAHSSRS
Sbjct: 241 LERRPAHSSRS 251
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 223 bits (568), Expect = 1e-58
Identities = 133/235 (56%), Positives = 139/235 (59%), Gaps = 17/235 (7%)
Query: 17 QGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPA 76
+ RH H+ R P ATP R P + PG SP PA P A P R
Sbjct: 133 RSRHPHT-RYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGE---AGPPRGD 188
Query: 77 LRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPP 136
R P PG R + PS+ PP G G+ GKG P P PP P
Sbjct: 189 PRPRAPRPGDHPRRSPALRETPSLSPPSP-----GRRNGKRAAGKGTTPQPQP--PPPPC 241
Query: 137 GGRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISCTLSHKPAS 196
RR AL T G VFRAADWGFGRSEQHLRGLTLIISCTLSHKPAS
Sbjct: 242 ATRREEDMALRTRDRTSSRGT------VFRAADWGFGRSEQHLRGLTLIISCTLSHKPAS 295
Query: 197 LRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 251
LRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS
Sbjct: 296 LRRSGTQAWGPRGLPLRATPESFKGSPDCTGPEIGFDMELLRSSLERRPAHSSRS 350
Score = 31.2 bits (69), Expect = 0.89
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 16/93 (17%)
Query: 11 GGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRP-------APGRAQSPVPAAGAV 63
G G +G R + PG +PA P L P P A G+ +P P
Sbjct: 180 GEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQP--- 236
Query: 64 PSPPAAAHPARPALRGETPAPGRRGRATTRGEV 96
P PP A R E A R R ++RG V
Sbjct: 237 PPPPCATR------REEDMALRTRDRTSSRGTV 263
Score = 28.1 bits (61), Expect = 7.6
Identities = 35/135 (25%), Positives = 44/135 (32%), Gaps = 24/135 (17%)
Query: 3 RKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGA 62
R R ++Q G R + R+ + A + P P P + S + AA
Sbjct: 22 RPRVNEQWGS------RAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAA-- 73
Query: 63 VPSPPAAAHPARPALRGETPA-----PGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRG 117
PAAA P + PA G R RA P R R
Sbjct: 74 ----PAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRR-------WRR 122
Query: 118 RPGKGPPPNPSRRLP 132
RPG PP P R P
Sbjct: 123 RPGPSPPLQPRSRHP 137
>gi|239754245 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 185 bits (470), Expect = 3e-47
Identities = 99/142 (69%), Positives = 104/142 (73%), Gaps = 15/142 (10%)
Query: 125 PNPSRRLPPAPPGGR--------RTWLSALATGPAAGGAGRRR-------RSPPVFRAAD 169
P+ +++ P P G+ R SA T G R R VFRAAD
Sbjct: 19 PSATQKQPSLPSDGKNYAEENLQRDRSSATKTDNLRGLTAERNTTQNKLPRVAAVFRAAD 78
Query: 170 WGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGPE 229
WGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGPE
Sbjct: 79 WGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGPE 138
Query: 230 IGFDMELLRSSLERRPAHSSRS 251
IGFDMELLRSSLERRPAHSSRS
Sbjct: 139 IGFDMELLRSSLERRPAHSSRS 160
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 59.3 bits (142), Expect = 3e-09
Identities = 60/195 (30%), Positives = 74/195 (37%), Gaps = 35/195 (17%)
Query: 10 GGGGGGGQGRHRHSSRAPGTRTPAT---PARSPRP---PLCA-------PRPAPGRAQSP 56
GGGGG QG + P A PARS R PL P+ G +P
Sbjct: 1071 GGGGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAP 1130
Query: 57 VPAAGAVPSPP-AAAHPAR------PALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPL 109
P + A P PP A A P+ P + + P+ GR++ + PP P
Sbjct: 1131 SPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTE--AEPPTQPEPT 1188
Query: 110 RGGGMGRGRPGKGP-----PPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRR------ 158
GGG G P P PP+PS PA P G T G A GA RR
Sbjct: 1189 GGGGGGGSSPSPAPAMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQN 1248
Query: 159 --RRSPPVFRAADWG 171
RR +F + D G
Sbjct: 1249 EARRRSTLFLSTDAG 1263
Score = 40.8 bits (94), Expect = 0.001
Identities = 49/171 (28%), Positives = 59/171 (34%), Gaps = 19/171 (11%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPAR----SPRPPLCAPRPA-----PGRAQSP 56
P +GG GGGG H +S P + R S L P + P P
Sbjct: 1892 PWARGGSGGGGDSHHGGASYVPERTSSLQRQRLSDDSQSSLLSKPVSSLFQNWPKPPLPP 1951
Query: 57 VPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTR--GEVQPSVRPPLSHRPLRGGGM 114
+P V SP AAA P G T +TR V+ +RPPL R +
Sbjct: 1952 LPTGTGV-SPTAAAAP------GATSPSASSSSTSTRHLQGVEFEMRPPLLRRAPSPSLL 2004
Query: 115 GRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVF 165
P P PS LP P G L + P G G PVF
Sbjct: 2005 PASEHKVSPAPRPS-SLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVF 2054
Score = 38.5 bits (88), Expect = 0.006
Identities = 46/179 (25%), Positives = 58/179 (32%), Gaps = 55/179 (30%)
Query: 9 QGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPV----------- 57
+ G G G G + SRA G ++ S PP P G+A P
Sbjct: 1302 ESAGSGAGYGGYGAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARE 1361
Query: 58 ------PAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRG 111
G P PP P P+ R E P P + P H P+
Sbjct: 1362 RALKESSEGGGAPQPP----PRPPSPRYEAPPPTPHHHS-----------PHAHHEPVL- 1405
Query: 112 GGMGRGRPGKGPPPNPSRR--------------LPPAPPGGRRTWLSALATGPAAGGAG 156
R PP+P+RR LP +PP RR+ L L P A G G
Sbjct: 1406 ------RLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLP--PTAPGVG 1456
Score = 35.0 bits (79), Expect = 0.062
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 12/52 (23%)
Query: 5 RPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSP 56
+P GGGGGGG SS +P PA SP PP +P P P P
Sbjct: 1184 QPEPTGGGGGGG------SSPSPA------PAMSPVPPSPSPVPTPASPSGP 1223
Score = 34.7 bits (78), Expect = 0.081
Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 18/104 (17%)
Query: 36 ARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGE 95
A RP L P R+ S VP + +P PP + P P P P GR T
Sbjct: 894 AEDDRPYLAPPAMKFSRSLS-VPGSEDIPPPPTTSPPEPP--YSTPPVPSSSGRLT---- 946
Query: 96 VQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGR 139
PS RGG G G P +P+ P+PP R
Sbjct: 947 --PSP---------RGGPFNPGSGGPLPASSPASFDGPSPPDTR 979
Score = 33.1 bits (74), Expect = 0.24
Identities = 29/111 (26%), Positives = 36/111 (32%), Gaps = 20/111 (18%)
Query: 39 PRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPA-----------PGRR 87
P PP +P P P + PVP++ +P P P G PA P R
Sbjct: 921 PPPPTTSP-PEPPYSTPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTR 979
Query: 88 GRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRR--LPPAPP 136
+ + PP H P PPP P PP PP
Sbjct: 980 VGSREKSLYHSGPLPPAHHHP------PHHHHHHAPPPQPHHHHAHPPHPP 1024
Score = 31.6 bits (70), Expect = 0.68
Identities = 43/167 (25%), Positives = 53/167 (31%), Gaps = 56/167 (33%)
Query: 28 GTRTPATPARSPRPPLCAPRPAPGR---------------AQSPVPAAGAV--------- 63
G P P R P P AP P P A P PA +
Sbjct: 1370 GGGAPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQ 1429
Query: 64 -PSPPAAAHPARPALRGETP--APGRRGRATTRGEVQPSVRPPLSHRPLRGGG------- 113
S PA+ AR +L P APG G P+ P +S +P R
Sbjct: 1430 EKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVS-KPWRSAAPEEPERL 1488
Query: 114 -----------------MGRGRPGKG----PPPNPSRRLPPAPPGGR 139
GRG P + PPP+P R +PP+P R
Sbjct: 1489 PLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPTSPR 1535
Score = 30.8 bits (68), Expect = 1.2
Identities = 45/158 (28%), Positives = 55/158 (34%), Gaps = 43/158 (27%)
Query: 20 HRHSSRAPGTRTPATPARSPRPP---LCAPRPAPGRAQS--------------PVPAAGA 62
HR P +P AR PP L P PA RA S P A+
Sbjct: 402 HREQDVVPFQESPKYAARRRGPPGTGLTVP-PALLRANSDTSMALPDWMVFSAPGAASSG 460
Query: 63 VPSPPAAAH----PARPA-------LRGETPAPGRRGRATTRG------EVQPSVRPPLS 105
P P + + P+ P LR + G R R+ +RG + QP RP S
Sbjct: 461 APGPTSGSQGQSQPSAPTTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSS 520
Query: 106 HRPLRGGGMGRGRPGKGPPPNP------SRRLPPAPPG 137
P G G G G G P R+L A PG
Sbjct: 521 GTPREGPAGGTG--GSGGPGGSLGSRGRRRKLYSAVPG 556
Score = 30.8 bits (68), Expect = 1.2
Identities = 47/173 (27%), Positives = 56/173 (32%), Gaps = 42/173 (24%)
Query: 10 GGGGGGGQG------------RHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQS-- 55
GGGGG G G + G+ TP P P L P GRA
Sbjct: 1709 GGGGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPY---PPQLMTPSKLRGRALGAS 1765
Query: 56 ----PVPAAG----AVPSPPAAAHP--------ARPALRGETPAPGRRGRATTRGEVQPS 99
P P+ G P+ P + A A G A G EV P
Sbjct: 1766 GGLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALRACSGPPTAGVAGGPVAVEPEVPPV 1825
Query: 100 VRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAA 152
P S P + + G GPPP PP P + SALAT A+
Sbjct: 1826 PLPTASSLPRK---LLPWEEGPGPPP------PPLPGPLAQPQASALATVKAS 1869
Score = 29.3 bits (64), Expect = 3.4
Identities = 36/140 (25%), Positives = 47/140 (33%), Gaps = 21/140 (15%)
Query: 32 PATPARSPRPPLCAP-RPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETP-APGRRGR 89
P +P +P PP P PAP PVP +PP A ++ A +G
Sbjct: 1580 PESPL-TPGPPHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGA 1638
Query: 90 ATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPP-------------NPSRRLPPAPP 136
+ G+ P PP P +PG PPP + L
Sbjct: 1639 SAAPGDPHPP-GPPAPAAP----APAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISS 1693
Query: 137 GGRRTWLSALATGPAAGGAG 156
+ LSA G A GG G
Sbjct: 1694 ASTLSSLSAEGGGSAGGGGG 1713
Score = 29.3 bits (64), Expect = 3.4
Identities = 34/123 (27%), Positives = 36/123 (29%), Gaps = 27/123 (21%)
Query: 27 PGTRTPATPARSPRPPLCAPRPAP------------------GRAQSPVPAAGAVPSPPA 68
P T PATP PP A P + S P P PPA
Sbjct: 1593 PDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPA 1652
Query: 69 AAHPARPALR-GETPAPGRRGRATTRGEVQPSVRP--------PLSHRPLRGGGMGRGRP 119
A PA A + G P PG S P LS GGG G
Sbjct: 1653 PAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGG 1712
Query: 120 GKG 122
G G
Sbjct: 1713 GAG 1715
Score = 28.9 bits (63), Expect = 4.4
Identities = 34/138 (24%), Positives = 42/138 (30%), Gaps = 7/138 (5%)
Query: 23 SSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGET- 81
+S APG P P P AP+P P V S ++ HP T
Sbjct: 1638 ASAAPGDPHPPGPPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTL 1697
Query: 82 -----PAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPP 136
G G G S L G G PP P + + P+
Sbjct: 1698 SSLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPYPPQLMTPSKL 1757
Query: 137 GGRRTWLS-ALATGPAAG 153
GR S L GP+ G
Sbjct: 1758 RGRALGASGGLRPGPSGG 1775
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 59.3 bits (142), Expect = 3e-09
Identities = 45/132 (34%), Positives = 55/132 (41%), Gaps = 18/132 (13%)
Query: 16 GQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPAR- 74
G +R+++R R ATP PR P AP A A P PA P+P AAA PAR
Sbjct: 89 GSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARA 148
Query: 75 ----PALRGETPAPG------RRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPP 124
A P+PG R RA P+ P + P G P + PP
Sbjct: 149 PRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG-------PRRAPP 201
Query: 125 PNPSRRLPPAPP 136
P + R PP PP
Sbjct: 202 PAVAAREPPLPP 213
Score = 41.6 bits (96), Expect = 7e-04
Identities = 51/159 (32%), Positives = 57/159 (35%), Gaps = 14/159 (8%)
Query: 14 GGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPA 73
G Q R AP P PA PP AP P RA P AA P PP PA
Sbjct: 163 GPAQPGPRAQRAAPLAAPPPAPAA---PPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPA 219
Query: 74 RPALRGETP----APGRRGRATTRGEVQP-SVRPPLSHRPLRGGGMGRGRPGKGPPPNPS 128
P + P P G G +P S+R + R L G G GR +G
Sbjct: 220 PPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVV--RYLGGSGGAGGRLTRGRVQGLL 277
Query: 129 RRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVFRA 167
A RT L ALA P G R+PP A
Sbjct: 278 EEEAAARGRLERTRLGALAL-PRGDRPG---RAPPAASA 312
Score = 32.0 bits (71), Expect = 0.52
Identities = 34/113 (30%), Positives = 40/113 (35%), Gaps = 21/113 (18%)
Query: 74 RPALRGET-PAPGRRGR----ATTRGEVQPSVRPPLSHRPLRGGGMGR----GRPGKGPP 124
+P RG T PAP R R A P+ PP P+ R P
Sbjct: 100 QPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP 159
Query: 125 PNPSRRLPPAPPGGRRTWLSALATGPAAGG--------AGRRRRSPPVFRAAD 169
P+P PA PG R + LA P A AG RR PP A +
Sbjct: 160 PSPG----PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAARE 208
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 55.1 bits (131), Expect = 6e-08
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 11/141 (7%)
Query: 23 SSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETP 82
S+R+P + P + P P P PG+ Q P P G P P P +P +G P
Sbjct: 234 SARSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQGPPPQGGNKPQGPPP--PGKP--QGPPP 288
Query: 83 APGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTW 142
G + R++ +P PP +G G+P PP ++ P PPG
Sbjct: 289 QGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG----- 343
Query: 143 LSALATGPAAGGAGRRRRSPP 163
P G R RSPP
Sbjct: 344 -KPQGPPPQGGSKSRSARSPP 363
Score = 52.8 bits (125), Expect = 3e-07
Identities = 44/164 (26%), Positives = 60/164 (36%), Gaps = 26/164 (15%)
Query: 17 QGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS-PPAAAHPARP 75
QG S R+P + P + P P P PG+ Q P P G P PP P P
Sbjct: 104 QGDKSRSPRSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 162
Query: 76 ALRGETPA------PGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSR 129
+G+ + PG+ +G QP PP +P G +P PPP +
Sbjct: 163 PPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 222
Query: 130 RLPP----------APPGGRRTWLSALATGPAAGGAGRRRRSPP 163
PP +PPG + GP G + + PP
Sbjct: 223 GPPPQGDNKSQSARSPPGKPQ--------GPPPQGGNQPQGPPP 258
Score = 52.4 bits (124), Expect = 4e-07
Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 12/158 (7%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS 65
P + G G + R S PG P +P P P PG+ Q P P G P
Sbjct: 156 PGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQ--GPPPPPGKPQGPPPQGGNKPQ 213
Query: 66 PPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPP 125
P P +P +G P + ++ +P PP +G G+P PP
Sbjct: 214 GPPP--PGKP--QGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 269
Query: 126 NPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPP 163
++ P PPG P G R RSPP
Sbjct: 270 GGNKPQGPPPPG------KPQGPPPQGGSKSRSSRSPP 301
Score = 50.1 bits (118), Expect = 2e-06
Identities = 42/147 (28%), Positives = 57/147 (38%), Gaps = 17/147 (11%)
Query: 32 PATPARSPRPPLCA------PRPAPGRAQSPVPAAGAVPS-PPAAAHPARPALRGE---- 80
P+ P + PP P P PG+ Q P P G P PP P P +G+
Sbjct: 51 PSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRS 110
Query: 81 -TPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGR 139
PG+ +G QP PP +P G +P +GPPP P + P P G
Sbjct: 111 PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP-QGPPP-PGKPQGPPPQGDN 168
Query: 140 RTWLSALATGPAAG---GAGRRRRSPP 163
++ S G G G + + PP
Sbjct: 169 KSRSSRSPPGKPQGPPPQGGNQPQGPP 195
Score = 46.2 bits (108), Expect = 3e-05
Identities = 45/162 (27%), Positives = 58/162 (35%), Gaps = 30/162 (18%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS 65
P + G G + R S PG P +P P P PG+ Q P P G P
Sbjct: 280 PGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQ--GPPPPPGKPQGPPPQGGNKPQ 337
Query: 66 PPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPP 125
P P +P +G P G + R+ +P +G G +GPPP
Sbjct: 338 GPPP--PGKP--QGPPPQGGSKSRSARSPPGKP-----------QGPPQQEGNNPQGPPP 382
Query: 126 ----NPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPP 163
NP + P APP G+ GP G R PP
Sbjct: 383 PAGGNPQQ--PQAPPAGQ-------PQGPPRPPQGGRPSRPP 415
Score = 43.1 bits (100), Expect = 2e-04
Identities = 41/143 (28%), Positives = 51/143 (35%), Gaps = 15/143 (10%)
Query: 28 GTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPP--AAAHPARPALRGETPAPG 85
G P P P P P + Q P P G PP P P P PG
Sbjct: 43 GGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP------PPPG 96
Query: 86 RRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTW--- 142
+ +G+ S R P +P G +P +GPPP P + P P GG +
Sbjct: 97 KPQGPPPQGDKSRSPRSP-PGKPQGPPPQGGNQP-QGPPPPPGKPQGPPPQGGNKPQGPP 154
Query: 143 LSALATGPAAGGAGRRR--RSPP 163
GP G + R RSPP
Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPP 177
Score = 30.8 bits (68), Expect = 1.2
Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 20/119 (16%)
Query: 54 QSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGG 113
+SP AG +P A +G PG+ +G QP PP +P
Sbjct: 27 ESPSLIAG---NPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 83
Query: 114 MGRGRPGKGPPPNPSRRLPP---------APPGGRRTWLSALATGPAAGGAGRRRRSPP 163
G +P PPP + PP +PPG + GP G + + PP
Sbjct: 84 QGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ--------GPPPQGGNQPQGPPP 134
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 55.1 bits (131), Expect = 6e-08
Identities = 48/164 (29%), Positives = 60/164 (36%), Gaps = 31/164 (18%)
Query: 14 GGGQGRHRHSSRAPGTRTPATPARSPRPP------LCAPRPAPGRAQSPVPAAG--AVPS 65
G +GR P R P P + PP P P PG+ + P G +
Sbjct: 34 GKPEGRRPQGGNQP-QRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGP 92
Query: 66 PPAAAHPARPA------LRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRP 119
PP P RP +G P PG+ R +G Q PP +P R G G
Sbjct: 93 PPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQG-GNQ 151
Query: 120 GKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPP 163
+GPPP+P + P PP P G R RSPP
Sbjct: 152 SQGPPPHPGK--PEGPP-------------PQEGNKSRSARSPP 180
Score = 47.4 bits (111), Expect = 1e-05
Identities = 44/163 (26%), Positives = 57/163 (34%), Gaps = 44/163 (26%)
Query: 4 KRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCA------PRPAPGRAQSPV 57
+RP QGG G TP P + RPP P P PG+ + P
Sbjct: 100 ERPPPQGGNQSQG--------------TPPPPGKPERPPPQGGNQSHRPPPPPGKPERPP 145
Query: 58 PAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTR--GEVQ------------------ 97
P G P HP +P G P G + R+ G+ Q
Sbjct: 146 PQGGNQSQGPPP-HPGKP--EGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGK 202
Query: 98 PSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRR 140
P PP P + G+P +GPPP P PP P G++
Sbjct: 203 PQGPPPAGGNPQQPQAPPAGKP-QGPPPPPQGGRPPRPAQGQQ 244
Score = 35.4 bits (80), Expect = 0.047
Identities = 29/107 (27%), Positives = 38/107 (35%), Gaps = 31/107 (28%)
Query: 4 KRPHQQGGGGGGG--------------QGRHRHSSRAPGTRTPATPARSPRPPLCAPRPA 49
+RP QGG G +G S+R+P + P + P P
Sbjct: 142 ERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKP--QGPPP 199
Query: 50 PGRAQSPVPAAG--------------AVPSPPAAAHPARPALRGETP 82
PG+ Q P PA G P PP P RPA +G+ P
Sbjct: 200 PGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPA-QGQQP 245
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 54.7 bits (130), Expect = 8e-08
Identities = 46/168 (27%), Positives = 64/168 (38%), Gaps = 22/168 (13%)
Query: 17 QGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS-PPAAAHPARP 75
QG S R+P + P + P P P PG+ Q P P G P PP P P
Sbjct: 144 QGDKSRSPRSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGP 202
Query: 76 ALRGETPA-----PGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPP----- 125
+G+ PG+ +G QP PP +P G +P PPP
Sbjct: 203 PPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 262
Query: 126 --------NPSRRLPPAPPGG--RRTWLSALATGPAAGGAGRRRRSPP 163
+ S R PP P G ++ + P AGG ++ ++PP
Sbjct: 263 PPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP 310
Score = 51.2 bits (121), Expect = 8e-07
Identities = 44/162 (27%), Positives = 59/162 (36%), Gaps = 24/162 (14%)
Query: 17 QGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS-PPAAAHPARP 75
QG S R+P + P + P P P PG+ Q P P G P PP P P
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP 141
Query: 76 ALRGETPA-----PGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRR 130
+G+ PG+ +G QP PP +P G +P PPP +
Sbjct: 142 PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQG 201
Query: 131 LPP---------APPGGRRTWLSALATGPAAGGAGRRRRSPP 163
PP +PPG + GP G + + PP
Sbjct: 202 PPPQGDKSRSSQSPPGKPQ--------GPPPQGGNQPQGPPP 235
Score = 47.8 bits (112), Expect = 9e-06
Identities = 39/133 (29%), Positives = 51/133 (38%), Gaps = 23/133 (17%)
Query: 46 PRPAPGRAQSPVPAAGAVPS-PPAAAHPARPALRGETPA-----PGRRGRATTRGEVQPS 99
P P PG+ Q P P G P PP P P +G+ PG+ +G QP
Sbjct: 50 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 109
Query: 100 VRPPLSHRPLRGGGMGRGRPG--------KGPPPNPSR-RLPPAPPGGRRTWLSALATGP 150
PP +P G RP +GPPP + R P +PPG + GP
Sbjct: 110 GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ--------GP 161
Query: 151 AAGGAGRRRRSPP 163
G + + PP
Sbjct: 162 PPQGGNQPQGPPP 174
Score = 41.6 bits (96), Expect = 7e-04
Identities = 39/148 (26%), Positives = 50/148 (33%), Gaps = 23/148 (15%)
Query: 17 QGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS-PPAAAHPARP 75
QG SS++P + P + P P P PG+ Q P P G P PP P P
Sbjct: 205 QGDKSRSSQSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 263
Query: 76 ALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAP 135
+G + + R P +P + G P G P P AP
Sbjct: 264 PAQGGSKSQSARS---------PPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQ-----AP 309
Query: 136 PGGRRTWLSALATGPAAGGAGRRRRSPP 163
P G+ GP G R PP
Sbjct: 310 PAGQ-------PQGPPRPPQGGRPSRPP 330
Score = 28.5 bits (62), Expect = 5.8
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 117 GRPGKGPPPNPSRRLPPAPPGGRRTW----LSALATGPAAGGAGRRRRSPP 163
G +GPPP P + P P GG + P G R RSPP
Sbjct: 44 GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 94
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 54.7 bits (130), Expect = 8e-08
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 33/141 (23%)
Query: 17 QGRHRHSSRAPGTRTPATPARSPR---------------PPLCAPRPAPGRAQSPVPAAG 61
Q +H+ S + GT T ++ ++P PP P PAP + P P G
Sbjct: 371 QKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPP-LRPPGPPTG 429
Query: 62 AVPSPPAAAHP-----ARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGR 116
P PP A P P LRG P G R P PP G+
Sbjct: 430 LPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPP---------GLPP 480
Query: 117 GRPGKGPPPNPSRRLPPAPPG 137
G P +GPPP R PPAPPG
Sbjct: 481 GPPPRGPPP---RLPPPAPPG 498
Score = 37.4 bits (85), Expect = 0.012
Identities = 37/113 (32%), Positives = 42/113 (37%), Gaps = 25/113 (22%)
Query: 27 PGTRTPATPARSPRPPLCAP-RPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPG 85
PG R P P PP P P PG P G P PP P R P P
Sbjct: 448 PGLRGPLPRLLPPGPPPGRPPGPPPG------PPPGLPPGPPPRGPPPR------LPPPA 495
Query: 86 RRGRATTR-GEVQPSVRPPLSHRPLRGGGMGRGRPGKGPP-PNPSRRLPPAPP 136
G R G ++P + PPL P PG PP P P+ + APP
Sbjct: 496 PPGIPPPRPGMMRPPLVPPLGPAP----------PGLFPPAPLPNPGVLSAPP 538
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 53.9 bits (128), Expect = 1e-07
Identities = 59/205 (28%), Positives = 77/205 (37%), Gaps = 21/205 (10%)
Query: 32 PATPAR--SPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGR 89
PATP+ +P PP P G +P P P PPAA P+ +G P +G
Sbjct: 1071 PATPSLKGAPTPPAATPPSPKGGPATPSPKGA--PMPPAATPPSP---KGGLATPPHKGA 1125
Query: 90 ATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATG 149
TT PS + L+ P +G PP+P L PP G T +A
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGA----PTTPAATPPSPKGGLATPPPKGAPTTPAATPPS 1181
Query: 150 PAAGGAGRRRRSPPVFRAA---DWGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWG 206
P G A + P AA G + +G + T P S + G
Sbjct: 1182 PKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT----PPS-PKGGLATPS 1236
Query: 207 PRGLPL--RATPESFKGSPDCTGPE 229
P+G P ATP S KG P P+
Sbjct: 1237 PKGAPTTPAATPPSPKGGPATPPPK 1261
Score = 52.4 bits (124), Expect = 4e-07
Identities = 70/228 (30%), Positives = 86/228 (37%), Gaps = 33/228 (14%)
Query: 27 PGTRTPATPARSPRPP---LCAPRP--APGR--AQSPVPAAG-AVPSP---PAAAHPARP 75
P P TPA +P P L P P AP A P P G A PSP P P
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 76 ALRGETPAPGRRGRATTRGEVQPSVR-------------PPLSHRPLRGGGMGRGRPGKG 122
+ +G P +G TT PS + PP + P GG+ P KG
Sbjct: 1227 SPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATP-PHKG 1285
Query: 123 PPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSP--PVFRAADWGFGRSEQHLR 180
P NP+ PP+P GG T A P A + SP P + A + +
Sbjct: 1286 AP-NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK 1344
Query: 181 GLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPDCTGP 228
G + + T S K S + GP P ATP S KG P T P
Sbjct: 1345 GTPTLPATTPSSKGGPTTPSSKE--GP--TPPAATP-SHKGGPAMTPP 1387
Score = 50.8 bits (120), Expect = 1e-06
Identities = 60/221 (27%), Positives = 79/221 (35%), Gaps = 29/221 (13%)
Query: 27 PGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA------GAVPSPPAAAHPARPALRGE 80
P P TPA +P P P + PAA G + +PP P PA
Sbjct: 1121 PHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAA--- 1177
Query: 81 TPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGP------PPNPSRRLPPA 134
TP + G AT + P+ P + P GG+ P P PP+P L
Sbjct: 1178 TPPSPKGGLATPSPKGAPTT--PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1235
Query: 135 PPGGRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISCTLSHKP 194
P G T +A P G A + P AA + L+G + P
Sbjct: 1236 SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAA------TPPSLKGGLATPPHKGAPNP 1289
Query: 195 ASLR----RSGTQAWGPRGLPL--RATPESFKGSPDCTGPE 229
A + + G P+G P ATP S KGSP P+
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK 1330
Score = 47.0 bits (110), Expect = 2e-05
Identities = 37/134 (27%), Positives = 45/134 (33%), Gaps = 21/134 (15%)
Query: 27 PGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAG-------AVPSPPAAAHPARPALRG 79
P TP +P P P P P A P P G P+PPA P+
Sbjct: 965 PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 80 ETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGM------------GRGRPGKGPPPNP 127
TP P +G +T PS + + PL G G P P P
Sbjct: 1025 ATPFP--KGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTP 1082
Query: 128 SRRLPPAPPGGRRT 141
PP+P GG T
Sbjct: 1083 PAATPPSPKGGPAT 1096
Score = 45.1 bits (105), Expect = 6e-05
Identities = 43/148 (29%), Positives = 52/148 (35%), Gaps = 26/148 (17%)
Query: 27 PGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAG-------AVPSPPAAAHPARPALRG 79
P TP +P P P P P A P P G P+PPAA P+ +G
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSP---KG 998
Query: 80 ETPAPGRRGRATTRGEVQPSVR--------------PPLSHRPLRGGGMGRGRPGKGPPP 125
P +G T PS + PP + P G KG P
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPT 1058
Query: 126 NPSRRLPPAPPGGRRT-WLSALATGPAA 152
P+ L P+P GG T L T PAA
Sbjct: 1059 TPAATL-PSPKGGPATPSLKGAPTPPAA 1085
Score = 43.5 bits (101), Expect = 2e-04
Identities = 61/200 (30%), Positives = 77/200 (38%), Gaps = 25/200 (12%)
Query: 33 ATPARSPRPPLCAPR--PAPGRAQSPVPAAG-AVPSPPAAAHPARPALRGETPAPGRRGR 89
ATPA P +P+ P P A P P G A PSP A P PA TP + G
Sbjct: 923 ATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWA--PTPPA---ATPPSPKGGP 977
Query: 90 ATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATG 149
AT + P+ PP + P GG P KG P P PP+P G S AT
Sbjct: 978 ATPSPKGAPT--PPAATPPSPKGGPATPSP-KG-APTPPAVTPPSPKG------SPAATP 1027
Query: 150 PAAGGAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRG 209
G + +PP + G + +G + TL P+ T +
Sbjct: 1028 FPKGASTPPAATPP----SPKGSPAATPLPKGAPTTPAATL---PSPKGGPATPSLKGAP 1080
Query: 210 LPLRATPESFKGSPDCTGPE 229
P ATP S KG P P+
Sbjct: 1081 TPPAATPPSPKGGPATPSPK 1100
Score = 40.8 bits (94), Expect = 0.001
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 8/111 (7%)
Query: 35 PARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRG 94
P P P AP+ AP + + A +P PA P+ +G P + G
Sbjct: 896 PKEGPATP--APKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGG 953
Query: 95 EVQPSVR----PPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRT 141
PS + PP + P GG P KG P P PP+P GG T
Sbjct: 954 PATPSPKWAPTPPAATPPSPKGGPATPSP-KG-APTPPAATPPSPKGGPAT 1002
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/149 (27%), Positives = 50/149 (33%), Gaps = 15/149 (10%)
Query: 32 PATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRAT 91
P PA +P P P P +P P A PSP PA P+ +G P +
Sbjct: 940 PTPPAATPPSPKGGPA-TPSPKWAPTPPAATPPSPKGG--PATPSPKGAPTPPAATPPSP 996
Query: 92 TRGEVQPSVR----PPLSHRPLRGGG-------MGRGRPGKGPPPNPSRRLPPAP-PGGR 139
G PS + PP P G G P PP+P P P G
Sbjct: 997 KGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGA 1056
Query: 140 RTWLSALATGPAAGGAGRRRRSPPVFRAA 168
T +A P G A + P AA
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAPTPPAA 1085
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Query: 23 SSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETP 82
SS+ T ATP+ P + P P G A +P+ P+ PA P P TP
Sbjct: 1364 SSKEGPTPPAATPSHKGGPAMTPPSPKRGPA---IPSPKGDPTSPAVI-PLSPKKAPATP 1419
Query: 83 APGRRGRAT-TRGEVQPSVRPPLSHRPLRGGGMGRGRP----GKGPP-----PNPSRRLP 132
R G AT ++G++ P P+S + +G P KG P PS + P
Sbjct: 1420 VT-REGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEP 1478
Query: 133 PAP 135
PAP
Sbjct: 1479 PAP 1481
Score = 38.9 bits (89), Expect = 0.004
Identities = 39/133 (29%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 33 ATPAR--SPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRA 90
ATP +P P + P P+P + P GA P+PPAA P+ G P G
Sbjct: 1279 ATPPHKGAPNPAVVTP-PSPKGGPATSPPKGA-PTPPAATPPSPKGSPGTPPPKG----- 1331
Query: 91 TTRGEVQPSVRPPLSHRPLRGGGMGRGRPG-KGPPPNPSRRLPPAPPGGRRTWLSALATG 149
P+V PP P + P KG P PS + P PP + A
Sbjct: 1332 ---APTPPAVTPP---SPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMT 1385
Query: 150 PAAGGAGRRRRSP 162
P + G SP
Sbjct: 1386 PPSPKRGPAIPSP 1398
Score = 35.8 bits (81), Expect = 0.036
Identities = 33/121 (27%), Positives = 43/121 (35%), Gaps = 15/121 (12%)
Query: 27 PGTRTPATPARSPR--PPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETP-- 82
P TP +P P PP AP P SP + G +PP P PA+ +P
Sbjct: 1289 PAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPG---TPPPKGAPTPPAVTPPSPKG 1345
Query: 83 -------APGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAP 135
P +G TT + P + G M P +G P PS + P
Sbjct: 1346 TPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRG-PAIPSPKGDPTS 1404
Query: 136 P 136
P
Sbjct: 1405 P 1405
Score = 33.9 bits (76), Expect = 0.14
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 21/130 (16%)
Query: 27 PGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAA--AHPARPALRGETPAP 84
P TP +P +P P P G P++ P+PPAA +H PA+ TP
Sbjct: 1335 PPAVTPPSPKGTPTLPATTPSSKGGPT---TPSSKEGPTPPAATPSHKGGPAM---TPPS 1388
Query: 85 GRRGRA--TTRGEVQPSVRPPLSHRPLRGGGM---GRGRPGKG---PP---PNPSRRLP- 132
+RG A + +G+ PLS + + G P KG PP P ++ P
Sbjct: 1389 PKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPA 1448
Query: 133 -PAPPGGRRT 141
AP GG T
Sbjct: 1449 TSAPKGGPAT 1458
Score = 33.5 bits (75), Expect = 0.18
Identities = 46/206 (22%), Positives = 69/206 (33%), Gaps = 27/206 (13%)
Query: 32 PATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAH------PARPALRGETPAPG 85
P +PA P P AP R + P+ G + +PPA PA A +G P
Sbjct: 1402 PTSPAVIPLSPKKAPATPVTREGAATPSKGDL-TPPAVTPVSLKKAPATSAPKGGPATPS 1460
Query: 86 RRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSA 145
+G T P+V PP P + K P P+ P G T +
Sbjct: 1461 SKGDPTL-----PAVTPPSPKEPPAPKQVATSSSPKKAPATPA-------PMGAPTLPAV 1508
Query: 146 LATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISCTLSHK--------PASL 197
+ + P A R P+ A ++ L +I ++ P
Sbjct: 1509 IPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPK 1568
Query: 198 RRSGTQAWGPRGLPLRATPESFKGSP 223
T + P TP ++KG+P
Sbjct: 1569 EAPATPSSKEASSPPAVTPSTYKGAP 1594
Score = 33.1 bits (74), Expect = 0.24
Identities = 42/154 (27%), Positives = 58/154 (37%), Gaps = 29/154 (18%)
Query: 32 PATPA--RSPRPPLCAP---RPAPGRAQSPVPAAGAVPSP-----PAAAHPARPALRGET 81
PATP+ + PP P + AP + +P A PSP P A P P T
Sbjct: 1571 PATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPAT 1630
Query: 82 PAPGRRGRAT----TRGEVQPSVRPPLSHRPLRGGGMGRGRPG----KGPPPNPSRRLPP 133
PAP +G T T ++ S P S G + + G KGP + P
Sbjct: 1631 PAP--KGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAP 1688
Query: 134 APPGGRRTWLSALATGPAAGGAGRRR---RSPPV 164
AP + + T P G ++ SPP+
Sbjct: 1689 APES------TPIITAPTRKGPQTKKSSATSPPI 1716
Score = 30.8 bits (68), Expect = 1.2
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 22/149 (14%)
Query: 2 IRKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAG 61
++K P GG + P TP +P P P A +P +A + G
Sbjct: 1443 LKKAPATSAPKGGPATPSSKGDPTLPAV-TPPSPKEPPAPKQVATSSSPKKAPATPAPMG 1501
Query: 62 A------VPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMG 115
A +PS P PA P+ R + AP AT + P+ P L M
Sbjct: 1502 APTLPAVIPSSPKEV-PATPSSRRDPIAP----TATLLSKKTPATLAP--KEALIPPAMT 1554
Query: 116 RGRPGKGP--------PPNPSRRLPPAPP 136
P K P P PS + +PP
Sbjct: 1555 VPSPKKTPAIPTPKEAPATPSSKEASSPP 1583
Score = 28.1 bits (61), Expect = 7.6
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 24/113 (21%)
Query: 27 PGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPA---AAHPARPALRGETPA 83
P T +P ++P P P+ AP P++ SPPA + + P+ +
Sbjct: 1550 PPAMTVPSPKKTPAIP--TPKEAPA-----TPSSKEASSPPAVTPSTYKGAPSPKELLIP 1602
Query: 84 PGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPP 136
P + P+V PP P KGP + P +PP
Sbjct: 1603 PAVTSPSPKEAPTPPAVTPP--------------SPEKGPATPAPKGTPTSPP 1641
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 53.9 bits (128), Expect = 1e-07
Identities = 41/112 (36%), Positives = 45/112 (40%), Gaps = 19/112 (16%)
Query: 31 TPATPARSPRPPLC-APRPAPGRAQSPVPAAGAVPSP---PAAAHPARPALRGETPAPGR 86
TP P SP P L A PAPG A P P +PSP P +A P P L G P
Sbjct: 518 TPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPA 577
Query: 87 RGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGG 138
G++ P PP G G PPP P PP PPGG
Sbjct: 578 ---PPLPGDLPPPPPPPPPPP---------GTDGPVPPPPPP---PPPPPGG 614
Score = 42.7 bits (99), Expect = 3e-04
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 14/108 (12%)
Query: 33 ATPAR--SPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRG--ETPAPGRRG 88
ATP+ +P P + P+P A + PA GA P PP P P L E P
Sbjct: 509 ATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPP----PPLPGLPSPQEAPPSAPPQ 564
Query: 89 RATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPP 136
G +P PPL G + P PPP +PP PP
Sbjct: 565 APPLPGSPEPPPAPPLP------GDLPPPPPPPPPPPGTDGPVPPPPP 606
Score = 33.9 bits (76), Expect = 0.14
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 32 PATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRAT 91
PA P PP P P P PVP P PP P R PG + +
Sbjct: 576 PAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDALGRRDSELGPGVKAKK- 634
Query: 92 TRGEVQPSVRPPL 104
+Q R PL
Sbjct: 635 ---PIQTKFRMPL 644
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 53.1 bits (126), Expect = 2e-07
Identities = 56/185 (30%), Positives = 63/185 (34%), Gaps = 42/185 (22%)
Query: 7 HQQGGGGGGGQGRHRHSSRAPG-----TRTPATPA---RSPRPPLCAPRPAPGRAQSPVP 58
H++GGGGG G G H S PG R P P P+PP+ P P + Q P P
Sbjct: 17 HRRGGGGGRG-GLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPI-PPPPPHQQQQQPPP 74
Query: 59 AAGAVPSPPAAAHPARP-------------------ALRGETPAPGRRGRATTRGEVQPS 99
PP P P +G PAPG G A P
Sbjct: 75 QQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPG-VGSAPPASSSAPP 133
Query: 100 VRPPLSHRPLRGGGMG----------RGRPGKGPPPNPSRRLPPAPP-GGRRTWLSALAT 148
PP S P G G G PG PP PS +P PP G A
Sbjct: 134 ATPPTSGAP-PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVP 192
Query: 149 GPAAG 153
GP G
Sbjct: 193 GPGPG 197
Score = 52.4 bits (124), Expect = 4e-07
Identities = 53/167 (31%), Positives = 61/167 (36%), Gaps = 29/167 (17%)
Query: 9 QGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRP----------APGRAQSPVP 58
QG G G G + A + PATP S PP P P AP A P P
Sbjct: 113 QGPGPAPGVGS---APPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTP 169
Query: 59 AAGAVPS-PPAAAHPARPALRGETPAPGRR---GRATTRGEVQPSVRPPLSHRPLRGGGM 114
+ VP+ PP A P P P PG + G +G P P GGG
Sbjct: 170 PSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKP-------GGGP 222
Query: 115 GRGRPGKGPPPNPSRRLPPAPPGGRR---TWLSALATGPAAGGAGRR 158
G PG P P R P GGR+ + GP GG G R
Sbjct: 223 GLSTPGGHP--KPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGR 267
Score = 46.6 bits (109), Expect = 2e-05
Identities = 33/123 (26%), Positives = 44/123 (35%), Gaps = 9/123 (7%)
Query: 32 PATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRAT 91
P + P PP + +P + P P G+ P ++A PA P G P G G
Sbjct: 93 PHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSG-PGPTP 151
Query: 92 TRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPA 151
T S P G+ P G PP P +P PG ++ GP
Sbjct: 152 TPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQ--------GPG 203
Query: 152 AGG 154
GG
Sbjct: 204 PGG 206
Score = 39.7 bits (91), Expect = 0.003
Identities = 39/141 (27%), Positives = 45/141 (31%), Gaps = 16/141 (11%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS 65
P G G G G A + P P +P P P PAA P
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPG 195
Query: 66 P-----PAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPG 120
P P P + G G G +T G +P P RGGG RG
Sbjct: 196 PGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKP---------PHRGGGEPRGGRQ 246
Query: 121 KGPPPNPSRRL--PPAPPGGR 139
PP + PP PGGR
Sbjct: 247 HHPPYHQQHHQGPPPGGPGGR 267
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 52.0 bits (123), Expect = 5e-07
Identities = 53/159 (33%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 18 GRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAG---AVPSPPAAAHPAR 74
G+HR + R PA PA + P+ A+ PVP AG A +P PAR
Sbjct: 66 GQHRRAV----ARLPAEPAHAVPHPVRPAARLRAPARDPVPLAGRQRAGAAPRGPGGPAR 121
Query: 75 -PALRG----------ETPAPGRRGRATTRGEVQP-SVRPPLSHRPLRGGGMGRGR---P 119
PA+R E PAP GRA G QP +P + RP RGG + RG P
Sbjct: 122 TPAVRAGRRAADGPGEEAPAP---GRARFSGLSQPRGPQPRAAVRPRRGGALPRGTGAVP 178
Query: 120 GKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRR 158
+GP P R + G L GP+A G +R
Sbjct: 179 ERGPGTEPQRGRRCSDLQGLGGRLRGCPAGPSARGERQR 217
>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
isoform B' [Homo sapiens]
Length = 240
Score = 52.0 bits (123), Expect = 5e-07
Identities = 49/144 (34%), Positives = 54/144 (37%), Gaps = 20/144 (13%)
Query: 10 GGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAP------GRAQSPVPAAGAV 63
G GG G GR G P PA P P+ GR AA A
Sbjct: 99 GAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAAT 158
Query: 64 PS--------PPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMG 115
S PP P P RG P PG G ++P + PP+ P RG MG
Sbjct: 159 ASIAGAPTQYPPGRGGPPPPMGRG-APPPGMMGPPPG---MRPPMGPPMGIPPGRGTPMG 214
Query: 116 RGRPGKGPPPNPSRRLPPAPPGGR 139
PG PPP P R PP PPG R
Sbjct: 215 MPPPGMRPPP-PGMRGPP-PPGMR 236
Score = 34.7 bits (78), Expect = 0.081
Identities = 25/77 (32%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Query: 28 GTRTPATPARS-PRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGR 86
G T P R P PP+ P PG P P PP P R G P R
Sbjct: 163 GAPTQYPPGRGGPPPPMGRGAPPPGM-MGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMR 221
Query: 87 RGRATTRGEVQPSVRPP 103
RG P +RPP
Sbjct: 222 PPPPGMRGPPPPGMRPP 238
Score = 31.2 bits (69), Expect = 0.89
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPR-PPLCAPRPAPGR-AQSPVPAAGAV 63
P Q G GG + PG P R P PP+ P PGR +P G
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIP---PGRGTPMGMPPPGMR 221
Query: 64 PSPPAAAHPARPALRGETP 82
P PP P P +R P
Sbjct: 222 PPPPGMRGPPPPGMRPPRP 240
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 51.6 bits (122), Expect = 6e-07
Identities = 48/134 (35%), Positives = 55/134 (41%), Gaps = 25/134 (18%)
Query: 27 PGTRTPATPARSPRPPLCAP----RPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETP 82
P PA PA +P PP AP RP PG P AA AVP PPAAA A P
Sbjct: 258 PAAPAPAAPAAAPPPPPPAPATLARP-PGHPAGPPTAAPAVP-PPAAAQNGGSAGAAPAP 315
Query: 83 APGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKG-PPPNPSRRLPPAPPGGRRT 141
AP G A G QP G G P G +P R + APP +
Sbjct: 316 APAAGGPAGVSG--QP------------GPGAAAAAPAPGVKAESPKRVVQAAPPAAQ-- 359
Query: 142 WLSALATGPAAGGA 155
+ A+GPA+ A
Sbjct: 360 --TLAASGPASTAA 371
Score = 49.3 bits (116), Expect = 3e-06
Identities = 49/134 (36%), Positives = 54/134 (40%), Gaps = 39/134 (29%)
Query: 13 GGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAP-GRAQS--PVPAAGAVPS--PP 67
GGGG R P R P PA P PP RP P G A S PVPAA AV + P
Sbjct: 98 GGGGPQR----PGPPSPRRPLVPA-GPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEP 152
Query: 68 AAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNP 127
A A PA+PA P + G G G G PG GP P P
Sbjct: 153 APAGPAKPA-------------------------GPAALAARAGPGPGPG-PGPGPGPGP 186
Query: 128 SRRLPPAPPGGRRT 141
+ PA PG +T
Sbjct: 187 GK---PAGPGAAQT 197
Score = 44.7 bits (104), Expect = 8e-05
Identities = 52/202 (25%), Positives = 59/202 (29%), Gaps = 29/202 (14%)
Query: 5 RPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVP 64
RP +G G + A PA PA+ P A R PG P P G P
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGP 186
Query: 65 SPPA-------------------AAHPA------RPALRGETPAPGRRGRATTRGEVQPS 99
PA AA PA PA P P G +
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGA 246
Query: 100 VRPPLSHRPLRGGGMGRGRPGKGPPPNP----SRRLPPAPPGGRRTWLSALATGPAAGGA 155
PP P P PPP P + PP P G T A+ AA
Sbjct: 247 AAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG 306
Query: 156 GRRRRSPPVFRAADWGFGRSEQ 177
G +P AA G S Q
Sbjct: 307 GSAGAAPAPAPAAGGPAGVSGQ 328
Score = 28.5 bits (62), Expect = 5.8
Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 26/126 (20%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA----- 60
P G G GQ ++ AP P A SP+ + A PA + PA+
Sbjct: 317 PAAGGPAGVSGQPGPGAAAAAPA---PGVKAESPKRVVQAAPPAAQTLAASGPASTAASM 373
Query: 61 -------GAVPSPPAAAHPA--------RPALRGETPAPGRRGRATT---RGEVQPSVRP 102
GA+PSP A PA + A T + R ATT R + P+V
Sbjct: 374 VIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLA 433
Query: 103 PLSHRP 108
P +P
Sbjct: 434 PRLPQP 439
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 51.2 bits (121), Expect = 8e-07
Identities = 59/177 (33%), Positives = 67/177 (37%), Gaps = 30/177 (16%)
Query: 12 GGGGGQGRHRHSSRAPGTRTPATPA----RSPRPPLCAPRPAPGRA--QSPVPAAGAVPS 65
GGGG G ++ APG P PA + P PP AP P PG A Q P P A A+P
Sbjct: 5 GGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP-PRAEALPP 63
Query: 66 PPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGP-- 123
A R LR + GR G T G + P G GRG P P
Sbjct: 64 EAADEGGPRGRLRSRDSSCGRPG---TPGAASTAKGSP-------NGECGRGEPQCSPAG 113
Query: 124 PPNPSRRLPPAPPGGRRTWLSALATGPA---------AGGAGRRRRSPPVFRAADWG 171
P P+R P R S A GP AG AG R S F +G
Sbjct: 114 PEGPAR--GPKVSFSCRGAASGPAPGPGPAEEAGSEEAGPAGEPRGSQASFMQRQFG 168
Score = 36.2 bits (82), Expect = 0.028
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 34 TPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTR 93
+P RPP P PAP A P + P PA+ R + G PA G A
Sbjct: 754 SPRLVRRPP---PGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPA 810
Query: 94 GEVQPSVRPPLSHRPLRGGGMGRGRPGKG----PPPNPSRRLPPAP 135
+ + RP + +P + G PG P + + RL P P
Sbjct: 811 RRLSRASRPLSASQP----SLPHGAPGPAASTRPASSSTPRLGPTP 852
Score = 33.5 bits (75), Expect = 0.18
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 13/114 (11%)
Query: 23 SSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETP 82
++ +PG PA+P +P P APR +P P AG + +RP +
Sbjct: 768 AAASPGPPPPASPPGAPASPR-APRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPS 826
Query: 83 AP-GRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAP 135
P G G A S RP S P +G + P+P RR +P
Sbjct: 827 LPHGAPGPAA-------STRPASSSTP----RLGPTPAARAAAPSPDRRDSASP 869
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 51.2 bits (121), Expect = 8e-07
Identities = 70/209 (33%), Positives = 84/209 (40%), Gaps = 49/209 (23%)
Query: 18 GRHRHS------SRAPGTRTPATPARS--PRPPLCAPRPAPGRAQSPVPAAGAVPSPPAA 69
G RHS S AP +P+ PAR+ P PP +P P + +SPVP PSP
Sbjct: 330 GGQRHSPLSQRHSPAPQCPSPSPPARAAPPCPPCQSPVP---QRRSPVPPC---PSPQQR 383
Query: 70 AHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHR--PLRGGGMGRGRPGKGPPPNP 127
PA P+ +P P R R V PS + P R P+ P P P P
Sbjct: 384 RSPASPSC--PSPVPQR------RSPVPPSCQSPSPQRRSPV---------PPSCPAPQP 426
Query: 128 SRRLPPAPPGGRRTWLSALATGPA----AGGAGRRRRSPPVFRAADWGFGRSEQHLRGLT 183
R PP PPG R A A P+ AG GRR S AA G T
Sbjct: 427 -RPPPPPPPGERTLAERAYAKPPSHHVKAGFQGRRSYSELAEGAAYAGASPPWLQAEAAT 485
Query: 184 LIISCTLSHKPASLRRSGTQAWGPRGLPL 212
L KP R G++ +GP G PL
Sbjct: 486 L-------PKP---RAYGSELYGP-GRPL 503
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 50.8 bits (120), Expect = 1e-06
Identities = 55/184 (29%), Positives = 65/184 (35%), Gaps = 18/184 (9%)
Query: 9 QGGGGGGGQGRHRHSSRAPGTRTPATPARSPRP-PLCAPRPAPGRAQSPVPAAGAVPSPP 67
+G G G+ R PG P P R+ P P P A + + P A P P
Sbjct: 1253 KGQKGEPGEMGLRGQVGPPGD--PGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSP 1310
Query: 68 AAAH----PARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGP 123
A P P L+G PG RG RG P P + + GG G G PG+
Sbjct: 1311 GRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVI--GGEGPGLPGRKG 1368
Query: 124 PPNPSRRLPPAPPG-----GRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQH 178
P PS PP P G G R T R R PP + G E
Sbjct: 1369 DPGPSG--PPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPP--GPGEGGIAPGEPG 1424
Query: 179 LRGL 182
L GL
Sbjct: 1425 LPGL 1428
Score = 42.0 bits (97), Expect = 5e-04
Identities = 43/144 (29%), Positives = 47/144 (32%), Gaps = 18/144 (12%)
Query: 12 GGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVP-----AAGAVPSP 66
G G GR RA TP P P L PR PG P A G V
Sbjct: 1299 GFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGG 1358
Query: 67 PAAAHPAR---------PALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRG---GGM 114
P R P RG PG RG G + R G GG+
Sbjct: 1359 EGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGI 1418
Query: 115 GRGRPG-KGPPPNPSRRLPPAPPG 137
G PG G P +P + P PPG
Sbjct: 1419 APGEPGLPGLPGSPGPQGPVGPPG 1442
Score = 41.6 bits (96), Expect = 7e-04
Identities = 43/164 (26%), Positives = 56/164 (34%), Gaps = 15/164 (9%)
Query: 5 RPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRA--QSPVPAAGA 62
RP ++G G G+ + PG P P P + P PG + Q P GA
Sbjct: 2056 RPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGA 2115
Query: 63 VPSPPAAAHPAR------PALRGETPAPGRRGR------ATTRGEVQPSVRPPLSHRPLR 110
P + P ++G+ PG RG+ RG P +P L
Sbjct: 2116 KGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGP 2175
Query: 111 GGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGG 154
G +G G GPP P P P G TGP G
Sbjct: 2176 PGPVG-GHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRG 2218
Score = 39.3 bits (90), Expect = 0.003
Identities = 45/164 (27%), Positives = 56/164 (34%), Gaps = 39/164 (23%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS 65
P ++G G G+ + PG + P A R P PG P AG
Sbjct: 1990 PGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGP-------PG----PSGLAGEPGK 2038
Query: 66 PPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGK-GPP 124
P P R GE PG RG +GE RG G+ GPP
Sbjct: 2039 PGIPGLPGRAGGVGEAGRPGERGERGEKGE--------------------RGEQGRDGPP 2078
Query: 125 PNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVFRAA 168
P PP PPG + +S GP G + PP + A
Sbjct: 2079 GLPGTPGPPGPPGPK---VSVDEPGPGLSG----EQGPPGLKGA 2115
Score = 36.6 bits (83), Expect = 0.021
Identities = 44/162 (27%), Positives = 53/162 (32%), Gaps = 32/162 (19%)
Query: 10 GGGGGGGQGRHRHSSRAPGTR----------TPATPARSPRPPLCAPRPAPGRAQSPVPA 59
G G G+ R APG R P R+ P P+ G P P
Sbjct: 1646 GDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPP 1705
Query: 60 AGAVPSPPAAAHPARPALRGETPA------------PGRRGRATTRG----EVQPSVRPP 103
V + P A P RG+ PG RG RG + P VR P
Sbjct: 1706 GRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGP 1765
Query: 104 LSHRPLRG--GGMGR----GRPGKGPPPNPSRRLPPAPPGGR 139
+ RG G GR G+PG P P+ A GR
Sbjct: 1766 AGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGR 1807
Score = 36.2 bits (82), Expect = 0.028
Identities = 41/152 (26%), Positives = 50/152 (32%), Gaps = 18/152 (11%)
Query: 5 RPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPA----PGRAQSPVPAA 60
+P QG G G PG A PA P P PGR + A
Sbjct: 2166 KPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGA 2225
Query: 61 GAVPSPPAAA-------HPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGG 113
+P PP + P P GET PG GR G+ P + P G
Sbjct: 2226 VGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGP 2285
Query: 114 MG-RGRPGKGPPPN------PSRRLPPAPPGG 138
+G +G PG P P + PGG
Sbjct: 2286 VGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGG 2317
Score = 35.0 bits (79), Expect = 0.062
Identities = 37/126 (29%), Positives = 41/126 (32%), Gaps = 13/126 (10%)
Query: 27 PGTRTPATPARSPRPPLCAPRPA----PGRAQSPVPAA-----GAVPSPPAAAHPARPAL 77
PG R P PP + P PGR P P G V P P L
Sbjct: 1591 PGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGL 1650
Query: 78 RGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMG----RGRPGKGPPPNPSRRLPP 133
G+ G RG RG V R G G +G G+ PP P RL
Sbjct: 1651 PGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVD 1710
Query: 134 APPGGR 139
PG R
Sbjct: 1711 TGPGAR 1716
Score = 32.7 bits (73), Expect = 0.31
Identities = 43/133 (32%), Positives = 47/133 (35%), Gaps = 22/133 (16%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS 65
P +G G G + PG R A P +P L PR PG PV G P
Sbjct: 2134 PGIKGDRGEPGPRGQDGNPGLPGERGMAGP--EGKPGLQGPRGPPG----PVGGHGD-PG 2186
Query: 66 PPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPP 125
PP A P L G G G GE P R L G G PG PP
Sbjct: 2187 PPGA-----PGLAGPAGPQGPSGLKGEPGETGPP------GRGLTGPTGAVGLPG---PP 2232
Query: 126 NPSRRL-PPAPPG 137
PS + P PG
Sbjct: 2233 GPSGLVGPQGSPG 2245
Score = 32.3 bits (72), Expect = 0.40
Identities = 33/112 (29%), Positives = 39/112 (34%), Gaps = 32/112 (28%)
Query: 78 RGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMG---------------------- 115
+GE PGR G A +GE+ P S P + G +G
Sbjct: 2643 KGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGE 2702
Query: 116 RGRPGKGPPPNPS----RRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPP 163
RG PG G P PS PP PPG S GP + R PP
Sbjct: 2703 RGTPGIGGFPGPSGNDGSAGPPGPPG------SVGPRGPEGLQGQKGERGPP 2748
Score = 31.6 bits (70), Expect = 0.68
Identities = 37/121 (30%), Positives = 42/121 (34%), Gaps = 10/121 (8%)
Query: 27 PGTRTPATPARSPRPPLCAPRPA----PGRA--QSPVPAAGAVPSPPAAAHPARPALRGE 80
PG R PA PP R PG A P AAG P P LRGE
Sbjct: 1760 PGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDP---GRDGLPGLRGE 1816
Query: 81 TPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGR-GRPGKGPPPNPSRRLPPAPPGGR 139
PG G G+ +P L+ + G G GR G+ S R P G
Sbjct: 1817 QGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGE 1876
Query: 140 R 140
R
Sbjct: 1877 R 1877
Score = 31.6 bits (70), Expect = 0.68
Identities = 46/180 (25%), Positives = 56/180 (31%), Gaps = 36/180 (20%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS 65
P G G G + PG P +P P P + + G +
Sbjct: 2350 PGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGP----------PGPPGVKGDLGLPGLPGA 2399
Query: 66 PPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPP 125
P P + RGE PG P R L G G PG PP
Sbjct: 2400 PGVVGFPGQTGPRGEMGQPG-----------------PSGERGLAGPPGREGIPGPLGPP 2442
Query: 126 NPSRRLPPAPPGGRRTWLSALATGPAAGGAG-RRRRSPPVFRAADWGFGR-SEQHLRGLT 183
P + PPG + L P G G R R P R D GR ++ RGLT
Sbjct: 2443 GPPGSV--GPPGA--SGLKGDKGDPGVGLPGPRGERGEPGIRGED---GRPGQEGPRGLT 2495
Score = 31.2 bits (69), Expect = 0.89
Identities = 44/155 (28%), Positives = 55/155 (35%), Gaps = 23/155 (14%)
Query: 6 PHQQGGGGGGGQGRHRHSSR--APGTR-TPATPA-RSPRPPLCAPRPAPGRA-QSPVPAA 60
P QG G G+ + S APG P +P + PR P A P R P+ A
Sbjct: 1432 PGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEA 1491
Query: 61 GAV----PSPPAAAH-----PARPALRGETPAPGRRGRATTRGE---------VQPSVRP 102
G P PA + RP +G PG GR +GE V P+V
Sbjct: 1492 GEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAG 1551
Query: 103 PLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPG 137
P + G RG G P + P PG
Sbjct: 1552 PKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPG 1586
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 50.8 bits (120), Expect = 1e-06
Identities = 55/179 (30%), Positives = 72/179 (40%), Gaps = 38/179 (21%)
Query: 7 HQQGGGG--GGGQGR----HRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA 60
H GG G GQ + H + PG P P P+ P P P + P+P
Sbjct: 1249 HSHGGLGVLPDGQSKLQALHAQYCQGPGPAPP--PYLPPQQPSLPPPP---QQPPPLPQL 1303
Query: 61 GAVPSPPAAAHPARP----ALRGETPAP-----GRRGRATTRG-----EVQPSVRPPLSH 106
G++P PPA+A P P G P P GR GRA RG + P R PL H
Sbjct: 1304 GSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGRPGRAPRRGAGGHPQFAPHGRHPL-H 1362
Query: 107 RPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSA--LATGPAAGGAGRRRRSPP 163
+P P +P+ + PPA G + ++ + PAAG AG PP
Sbjct: 1363 QP----------TSPLPLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSRPP 1411
Score = 32.3 bits (72), Expect = 0.40
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 10/131 (7%)
Query: 14 GGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPA 73
GG + H R A PRPP + + G ++S P AG S + PA
Sbjct: 171 GGREAGPAHPGREKEAGYSAAVGVGPRPPRERGQLSRGASRSSSPGAGGGHSTSTSTSPA 230
Query: 74 RPALRGETPAPGRR--------GRATTRGEVQPSVRPP--LSHRPLRGGGMGRGRPGKGP 123
R R G + P +PP LS P MG G G
Sbjct: 231 TTLQRKSDGENSRTVSVEGDAPGSDLSTAVDSPGSQPPYRLSQLPPSSSHMGGPPAGVGL 290
Query: 124 PPNPSRRLPPA 134
P RL PA
Sbjct: 291 PWAQRARLQPA 301
Score = 31.2 bits (69), Expect = 0.89
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 10/72 (13%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGA--- 62
P + GG H S +P + P P+ P PP P+P SP+P
Sbjct: 1406 PGSRPPGGSYSHPHHPQSPLSPHSPIPPHPSYPPLPP-----PSPHTPHSPLPPTSPHGP 1460
Query: 63 --VPSPPAAAHP 72
PP A+P
Sbjct: 1461 LHASGPPGTANP 1472
Score = 30.4 bits (67), Expect = 1.5
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 17/61 (27%)
Query: 98 PSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGR 157
P R P+ HR +GP P P LPPAP G TGP+ GR
Sbjct: 637 PPGRAPIPHRHYPAP--------EGPAPAPPGPLPPAPNSG---------TGPSGVAGGR 679
Query: 158 R 158
R
Sbjct: 680 R 680
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 50.8 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 9/137 (6%)
Query: 4 KRPHQQGGGGGGGQ---GRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA 60
K P QQ G G G + S+ PG PA P P P PG A+ P
Sbjct: 448 KIPAQQAGPGKTSAQQTGPTKPPSQLPG---PAKPPPQQPGPAKPPPQQPGSAKPPSQQP 504
Query: 61 GAVPSPPAAAHPARPALR--GETPAPGRRGRATTRGEVQPSVRPPLSHRPLRG-GGMGRG 117
G+ PP PA+P+ + G T P ++ + QPS P + + + G G
Sbjct: 505 GSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSG 564
Query: 118 RPGKGPPPNPSRRLPPA 134
+P + P +PS + PP+
Sbjct: 565 KPLQPPTVSPSAKQPPS 581
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/144 (28%), Positives = 56/144 (38%), Gaps = 17/144 (11%)
Query: 4 KRPHQQGGGG--GGGQGRHRHSSRAPGT-RTPAT---PARSPRPPLCAPRP---APGRAQ 54
K P QQ G Q + ++ PG +TPA PA+ P + P+P PG Q
Sbjct: 370 KPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG-LQ 428
Query: 55 SPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGM 114
SP A G +P P + + + PG+ T PS P + P + G
Sbjct: 429 SPAKAPGPTKTPVQQPGPGK--IPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPG- 485
Query: 115 GRGRPGKGPPPNPSRRLPPAPPGG 138
P K PP P PP+ G
Sbjct: 486 ----PAKPPPQQPGSAKPPSQQPG 505
Score = 35.8 bits (81), Expect = 0.036
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 32 PATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRAT 91
P+ P+ S +PP+ P P AQ P G S P A P PA P+ + A
Sbjct: 296 PSLPSPS-KPPIQQPTPGKPPAQQP----GHEKSQPGPAKP--PA----QPSGLTKPLAQ 344
Query: 92 TRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPA 151
G V+P V+PP + +P +P GP P+++ P + ALA P
Sbjct: 345 QPGTVKPPVQPPGTTKP-------PAQP-LGPAKPPAQQTGSEKPSSEQPGPKALAQPPG 396
Query: 152 AGGAGRRRRSP 162
G ++ P
Sbjct: 397 VGKTPAQQPGP 407
Score = 32.3 bits (72), Expect = 0.40
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 27 PGT-RTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVP-----SPPAAAHPARPALRG- 79
PGT + PA P +PP ++ P P A A P +P PA+P +
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQV 415
Query: 80 ETP-----APGRRGRATTRGEVQPSVRPPLSHR-PLRGGGMGRGRPGKGPPPNPSRRLP- 132
TP PG + A G + V+ P + P + G G+ + P P +LP
Sbjct: 416 GTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPG 475
Query: 133 PAPP 136
PA P
Sbjct: 476 PAKP 479
Score = 28.1 bits (61), Expect = 7.6
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 18/114 (15%)
Query: 22 HSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGET 81
HS PG PA S P +Q P + G P PA + P ++ ET
Sbjct: 955 HSQSGPGAPMKQAPAPS----------QPPTSQGPPKSTGQAPPAPAKSIP----VKKET 1000
Query: 82 PAPGRRGRATTRGEVQPSVRPPLSHR---PLRGGGMGRGRPGKGPPPNPSRRLP 132
AP + + E P+V+ + + P++ P K P + P
Sbjct: 1001 KAPAAE-KLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSP 1053
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 50.8 bits (120), Expect = 1e-06
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 9/137 (6%)
Query: 4 KRPHQQGGGGGGGQ---GRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA 60
K P QQ G G G + S+ PG PA P P P PG A+ P
Sbjct: 448 KIPAQQAGPGKTSAQQTGPTKPPSQLPG---PAKPPPQQPGPAKPPPQQPGSAKPPSQQP 504
Query: 61 GAVPSPPAAAHPARPALR--GETPAPGRRGRATTRGEVQPSVRPPLSHRPLRG-GGMGRG 117
G+ PP PA+P+ + G T P ++ + QPS P + + + G G
Sbjct: 505 GSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSG 564
Query: 118 RPGKGPPPNPSRRLPPA 134
+P + P +PS + PP+
Sbjct: 565 KPLQPPTVSPSAKQPPS 581
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/144 (28%), Positives = 56/144 (38%), Gaps = 17/144 (11%)
Query: 4 KRPHQQGGGG--GGGQGRHRHSSRAPGT-RTPAT---PARSPRPPLCAPRP---APGRAQ 54
K P QQ G Q + ++ PG +TPA PA+ P + P+P PG Q
Sbjct: 370 KPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG-LQ 428
Query: 55 SPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGM 114
SP A G +P P + + + PG+ T PS P + P + G
Sbjct: 429 SPAKAPGPTKTPVQQPGPGK--IPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPG- 485
Query: 115 GRGRPGKGPPPNPSRRLPPAPPGG 138
P K PP P PP+ G
Sbjct: 486 ----PAKPPPQQPGSAKPPSQQPG 505
Score = 35.8 bits (81), Expect = 0.036
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 32 PATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRAT 91
P+ P+ S +PP+ P P AQ P G S P A P PA P+ + A
Sbjct: 296 PSLPSPS-KPPIQQPTPGKPPAQQP----GHEKSQPGPAKP--PA----QPSGLTKPLAQ 344
Query: 92 TRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPA 151
G V+P V+PP + +P +P GP P+++ P + ALA P
Sbjct: 345 QPGTVKPPVQPPGTTKP-------PAQP-LGPAKPPAQQTGSEKPSSEQPGPKALAQPPG 396
Query: 152 AGGAGRRRRSP 162
G ++ P
Sbjct: 397 VGKTPAQQPGP 407
Score = 32.3 bits (72), Expect = 0.40
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 27 PGT-RTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVP-----SPPAAAHPARPALRG- 79
PGT + PA P +PP ++ P P A A P +P PA+P +
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQV 415
Query: 80 ETP-----APGRRGRATTRGEVQPSVRPPLSHR-PLRGGGMGRGRPGKGPPPNPSRRLP- 132
TP PG + A G + V+ P + P + G G+ + P P +LP
Sbjct: 416 GTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPG 475
Query: 133 PAPP 136
PA P
Sbjct: 476 PAKP 479
Score = 28.1 bits (61), Expect = 7.6
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 18/114 (15%)
Query: 22 HSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGET 81
HS PG PA S P +Q P + G P PA + P ++ ET
Sbjct: 955 HSQSGPGAPMKQAPAPS----------QPPTSQGPPKSTGQAPPAPAKSIP----VKKET 1000
Query: 82 PAPGRRGRATTRGEVQPSVRPPLSHR---PLRGGGMGRGRPGKGPPPNPSRRLP 132
AP + + E P+V+ + + P++ P K P + P
Sbjct: 1001 KAPAAE-KLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSP 1053
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 50.8 bits (120), Expect = 1e-06
Identities = 49/152 (32%), Positives = 62/152 (40%), Gaps = 22/152 (14%)
Query: 23 SSRAPGTRT------PATPARSPRPPL-----CAPRPAPGRAQSPVPAAGAVPSPPAAAH 71
S PG+ T P TP RSP P + +P A + SP A A + P++ H
Sbjct: 1103 SESLPGSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSSLH 1162
Query: 72 PARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRL 131
L P GRR ++T+ P PP+S P R P G PP P+R
Sbjct: 1163 GLAAKLGPPRPKTGRR-KSTSSIPPSPLACPPISAPPPRSPS-----PLPGHPPAPAR-- 1214
Query: 132 PPAPPGGRRTWLSALATGPAAGG-AGRRRRSP 162
+P R L TG G AGRR R P
Sbjct: 1215 --SPRLRRGQSADKLGTGERLDGEAGRRTRGP 1244
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 50.8 bits (120), Expect = 1e-06
Identities = 52/175 (29%), Positives = 62/175 (35%), Gaps = 26/175 (14%)
Query: 3 RKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGA 62
R+ P +G G ++SSR G T R P R R+ SP P
Sbjct: 19 RRLPKAEGDKSGSAGAPSKNSSRLGGRPCMCTAGRRPNRASGRRR----RSCSPAPT--- 71
Query: 63 VPSPPAAAHP-ARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMG---RGR 118
PP +P +RP P R G S PP RP R GG R
Sbjct: 72 --WPPLCCYPQSRPTASAAGPGACMRASGRPHGNTTASTAPPRHPRPRRPGGPALRPTPR 129
Query: 119 PGKGPPPNPS---------RRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPV 164
P GP P P+ RR P A GRR A A P+ GA R P+
Sbjct: 130 PCAGPAPPPASRDCRCRRPRRWPRAGRRGRR----AGACKPSCAGAAWSARGAPL 180
Score = 44.7 bits (104), Expect = 8e-05
Identities = 53/176 (30%), Positives = 61/176 (34%), Gaps = 34/176 (19%)
Query: 3 RKRPHQQGGGGGGGQGRHRHSSRAPGTRTPAT-PARSPRPPLCAPRPAPGRAQSPVPAAG 61
+ RP G G R S R G T +T P R PRP R G A P P
Sbjct: 80 QSRPTASAAGPGACM---RASGRPHGNTTASTAPPRHPRP-----RRPGGPALRPTPRPC 131
Query: 62 AVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSV---------RPPLSHRPLRGG 112
A P+PP A+ R P GRRGR G +PS P S+R G
Sbjct: 132 AGPAPPPASRDCRCRRPRRWPRAGRRGRRA--GACKPSCAGAAWSARGAPLCSYRTSCAG 189
Query: 113 GMGRGRPGKGPPPNPSRRLPPAPPGG--RR---------TWLSALATGPAAGGAGR 157
G P P P+ P A RR W A GP A A +
Sbjct: 190 SCG---ARTAPTPAPTCASPSAAASSCCRRRRACSSPTTAWSGACGAGPTAATAAQ 242
Score = 29.3 bits (64), Expect = 3.4
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 28 GTRTPATPARSPRPPLCAPRPAPGRAQ---SPVPA-AGAVPSPPAAAHPARPALRGETPA 83
G RT TPA + P A R + SP A +GA + P AA A+P A
Sbjct: 192 GARTAPTPAPTCASPSAAASSCCRRRRACSSPTTAWSGACGAGPTAATAAQPGKPRSAAA 251
Query: 84 PGR 86
PGR
Sbjct: 252 PGR 254
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 50.4 bits (119), Expect = 1e-06
Identities = 51/150 (34%), Positives = 61/150 (40%), Gaps = 16/150 (10%)
Query: 20 HRHSSRAPGTRTPATPARS-----PRP-PLCAPRPAPGRAQS--PVPAAGAVPSPPAAAH 71
HRH S P PA PA PRP P AP APG QS P+P G +P+P
Sbjct: 172 HRHISTEPPPPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQL 231
Query: 72 PARPALRG-ETPAPGRRGRATTRGEVQPSVRPPLSHRPLRG------GGMGRGRPGKGPP 124
A A G P+PGR G+ + P R LR G +GRG + P
Sbjct: 232 RAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCEPSCGRLGRGYQQRLPS 291
Query: 125 PNPSRRLPPAPPGGRRTWLSALATGPAAGG 154
+P P AP R+ LA P G
Sbjct: 292 RSP-HAAPAAPAPALRSSFMFLALFPRKPG 320
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 50.4 bits (119), Expect = 1e-06
Identities = 55/181 (30%), Positives = 70/181 (38%), Gaps = 33/181 (18%)
Query: 3 RKRPHQQGGGGGGGQGRHRHSSRAPGTRTP---------ATPARSPRP-----PLCAPR- 47
++RP QGG G G R P PA SP P P AP+
Sbjct: 458 QQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQ 517
Query: 48 -------PAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSV 100
P G+ + P AG +PPAA PA P+ + + P +AT + V
Sbjct: 518 PASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPP----QATRQTSVSGPA 573
Query: 101 RPPLSHRPLRGGGMGRGRPGKGP-PPNPSRRLP---PAPPGGRRTWLSALATGPAAGGAG 156
P S P GG +G P K P P P+R+ P P G T +GP G AG
Sbjct: 574 PPKASGAP-PGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGP--GPAG 630
Query: 157 R 157
R
Sbjct: 631 R 631
Score = 45.4 bits (106), Expect = 5e-05
Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 7/134 (5%)
Query: 4 KRPHQQGGGGGGGQGRH-RHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGA 62
++P Q GQGR R + PG A P SP P A P R S +G
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS---VSGP 572
Query: 63 VPSPPAAAHPARPALRG---ETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRP 119
P + A P +G + P P R ++ P PP + +P G GRP
Sbjct: 573 APPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRP 632
Query: 120 GKGPPPNPSRRLPP 133
PS+ +PP
Sbjct: 633 KPQLAQKPSQDVPP 646
Score = 41.6 bits (96), Expect = 7e-04
Identities = 53/187 (28%), Positives = 67/187 (35%), Gaps = 33/187 (17%)
Query: 1 MIRKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA 60
M + P Q+ G+G H +TP+ P P + +PA AQ P
Sbjct: 414 MAQALPRQRQRDASPGRGSHG--------QTPS-PGALPLGRQTSQQPAGPPAQQRPPPQ 464
Query: 61 GAVPSPPAAAHPARPALRGETPAPGRR---GRATTRGEVQPSVRP--------PLSHRPL 109
G P P P L+ P G++ G G P P P S
Sbjct: 465 GGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAP 524
Query: 110 RGGGMGR-GRPGKGPPPNPSRRLPPAPPGGRRTWLSALAT------GPA---AGGA---G 156
G GR RP G P P PPA P +R AT GPA A GA G
Sbjct: 525 PTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGG 584
Query: 157 RRRRSPP 163
++R+ PP
Sbjct: 585 QQRQGPP 591
Score = 33.1 bits (74), Expect = 0.24
Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA---GA 62
P + G GGQ R + PG PA P R PR P Q P P+
Sbjct: 574 PPKASGAPPGGQQRQGPPQKPPG---PAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAG 630
Query: 63 VPSPPAAAHPARPALRGETPAPG 85
P P A P++ T A G
Sbjct: 631 RPKPQLAQKPSQDVPPPATAAAG 653
Score = 32.7 bits (73), Expect = 0.31
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 3 RKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQS-----PV 57
R+ P Q+ G G + + P T P T P P A RP P AQ P
Sbjct: 587 RQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPP 646
Query: 58 PAAGAVPSPPAAAHP 72
PA A PP HP
Sbjct: 647 PATAAAGGPP---HP 658
Score = 28.1 bits (61), Expect = 7.6
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 19/97 (19%)
Query: 34 TPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAA----AHPARPALRGETPAPGRRGR 89
T + P+PP P P A SP GA P P A + PA P+PG G
Sbjct: 23 TDLQRPQPP-----PPPPGAHSP----GATPGPGTATAERSSGVAPAASPAAPSPGSSGG 73
Query: 90 ATTRGEVQPSVRPPLS------HRPLRGGGMGRGRPG 120
+ +V+ + + GG G GR G
Sbjct: 74 GGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGG 110
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 50.4 bits (119), Expect = 1e-06
Identities = 55/181 (30%), Positives = 70/181 (38%), Gaps = 33/181 (18%)
Query: 3 RKRPHQQGGGGGGGQGRHRHSSRAPGTRTP---------ATPARSPRP-----PLCAPR- 47
++RP QGG G G R P PA SP P P AP+
Sbjct: 458 QQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQ 517
Query: 48 -------PAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSV 100
P G+ + P AG +PPAA PA P+ + + P +AT + V
Sbjct: 518 PASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPP----QATRQTSVSGPA 573
Query: 101 RPPLSHRPLRGGGMGRGRPGKGP-PPNPSRRLP---PAPPGGRRTWLSALATGPAAGGAG 156
P S P GG +G P K P P P+R+ P P G T +GP G AG
Sbjct: 574 PPKASGAP-PGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGP--GPAG 630
Query: 157 R 157
R
Sbjct: 631 R 631
Score = 45.4 bits (106), Expect = 5e-05
Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 7/134 (5%)
Query: 4 KRPHQQGGGGGGGQGRH-RHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGA 62
++P Q GQGR R + PG A P SP P A P R S +G
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS---VSGP 572
Query: 63 VPSPPAAAHPARPALRG---ETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRP 119
P + A P +G + P P R ++ P PP + +P G GRP
Sbjct: 573 APPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRP 632
Query: 120 GKGPPPNPSRRLPP 133
PS+ +PP
Sbjct: 633 KPQLAQKPSQDVPP 646
Score = 41.6 bits (96), Expect = 7e-04
Identities = 53/187 (28%), Positives = 67/187 (35%), Gaps = 33/187 (17%)
Query: 1 MIRKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA 60
M + P Q+ G+G H +TP+ P P + +PA AQ P
Sbjct: 414 MAQALPRQRQRDASPGRGSHG--------QTPS-PGALPLGRQTSQQPAGPPAQQRPPPQ 464
Query: 61 GAVPSPPAAAHPARPALRGETPAPGRR---GRATTRGEVQPSVRP--------PLSHRPL 109
G P P P L+ P G++ G G P P P S
Sbjct: 465 GGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAP 524
Query: 110 RGGGMGR-GRPGKGPPPNPSRRLPPAPPGGRRTWLSALAT------GPA---AGGA---G 156
G GR RP G P P PPA P +R AT GPA A GA G
Sbjct: 525 PTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGG 584
Query: 157 RRRRSPP 163
++R+ PP
Sbjct: 585 QQRQGPP 591
Score = 35.8 bits (81), Expect = 0.036
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 3 RKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSP---VP- 58
R+ P Q+ G G + + P T P T P P A RP P AQ P VP
Sbjct: 587 RQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPP 646
Query: 59 ----AAGAVPSPPAAAHPAR 74
AAG P P A PA+
Sbjct: 647 PATAAAGGPPHPQLKASPAQ 666
Score = 33.1 bits (74), Expect = 0.24
Identities = 25/83 (30%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA---GA 62
P + G GGQ R + PG PA P R PR P Q P P+
Sbjct: 574 PPKASGAPPGGQQRQGPPQKPPG---PAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAG 630
Query: 63 VPSPPAAAHPARPALRGETPAPG 85
P P A P++ T A G
Sbjct: 631 RPKPQLAQKPSQDVPPPATAAAG 653
Score = 28.1 bits (61), Expect = 7.6
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 19/97 (19%)
Query: 34 TPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAA----AHPARPALRGETPAPGRRGR 89
T + P+PP P P A SP GA P P A + PA P+PG G
Sbjct: 23 TDLQRPQPP-----PPPPGAHSP----GATPGPGTATAERSSGVAPAASPAAPSPGSSGG 73
Query: 90 ATTRGEVQPSVRPPLS------HRPLRGGGMGRGRPG 120
+ +V+ + + GG G GR G
Sbjct: 74 GGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGG 110
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 50.4 bits (119), Expect = 1e-06
Identities = 50/176 (28%), Positives = 61/176 (34%), Gaps = 29/176 (16%)
Query: 6 PHQQGGGG--GGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAV 63
P + GG G G G S+ +P + P++P+ R A P P P+ +
Sbjct: 311 PQRNGGSGQRSGAHGGRPGSAHSPPDK-PSSPSPRVRDKAAAAAPTPPARGKESPSPRSA 369
Query: 64 PSPPAAAHPA-------------RPALRGETPAPGRRGRATTRGEVQPSVRPPLSH-RPL 109
PS A R R AP RRGR R LS R
Sbjct: 370 PSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSS 429
Query: 110 RGGGMGRGRPGKGPPPNPSR-------RLPPAPPGGRRTWLSALATGPAAGGAGRR 158
G GRG PG GP P R R PP R +T P+ G GRR
Sbjct: 430 SDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRAR-----PASTSPSPGAHGRR 480
Score = 42.0 bits (97), Expect = 5e-04
Identities = 55/194 (28%), Positives = 63/194 (32%), Gaps = 41/194 (21%)
Query: 3 RKRPHQQGGGG----GGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSP-- 56
R P QG GG G G+ R R R + + P R R PRPAP R S
Sbjct: 367 RSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRR---RPRPAPPRGSSRSL 423
Query: 57 --------------VPAAGAVPSPP---------AAAHPARPALRGETPAPGRRGRATTR 93
P G P A P R +P+PG GR R
Sbjct: 424 SRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGR---R 480
Query: 94 G--EVQPSVRPPLSH----RPLRGGGMGRGRPGKGPPPNPSRRLPPAPPGGRRTWLSALA 147
G E + S R P H R R R + P +PSR P P R A
Sbjct: 481 GGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRA 540
Query: 148 TGPAAGGAGRRRRS 161
A RRRS
Sbjct: 541 RHSEAEATRARRRS 554
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 50.4 bits (119), Expect = 1e-06
Identities = 51/189 (26%), Positives = 68/189 (35%), Gaps = 41/189 (21%)
Query: 14 GGGQGRHRHSSRAPGTRTPATPARSP-RPPLCA-----PRPAPGRAQSPVPAAGAVPSPP 67
G +GR P RTP P + RPP P P PG+ + P P G P
Sbjct: 34 GKPEGRRPQGGNQP-QRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP 92
Query: 68 AAAHPARPA---------LRGETPAPGRRGRATTRGEVQPSVRPPLSHRPL----RGGGM 114
P +P +G P PG+ +G Q PP +P +GG
Sbjct: 93 PP-RPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 151
Query: 115 GRG---RPGK-------------GPPPNPSRRLPPAPPGGRRTW----LSALATGPAAGG 154
+G RPGK GPPP+P + P P GG ++ GP G
Sbjct: 152 SQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG 211
Query: 155 AGRRRRSPP 163
+ + PP
Sbjct: 212 GNQSQGPPP 220
Score = 45.4 bits (106), Expect = 5e-05
Identities = 39/135 (28%), Positives = 51/135 (37%), Gaps = 7/135 (5%)
Query: 6 PHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPS 65
PH G QG ++ P P P P P PG+ + P G P
Sbjct: 178 PHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQ 237
Query: 66 PPAAAHPARPALRGETPAPGRR-GRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPP 124
P HP +P +G P G + R G +P PP P + G+P +GPP
Sbjct: 238 GP-PPHPGKP--QGPPPQEGNKPQRPPPPG--RPQGPPPPGGNPQQPLPPPAGKP-QGPP 291
Query: 125 PNPSRRLPPAPPGGR 139
P P P PP G+
Sbjct: 292 PPPQGGRPHRPPQGQ 306
Score = 44.3 bits (103), Expect = 1e-04
Identities = 39/155 (25%), Positives = 55/155 (35%), Gaps = 17/155 (10%)
Query: 17 QGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAG--AVPSPPAAAHPAR 74
QG ++ P P P P P PG+ + P P G + PP P
Sbjct: 147 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEG 206
Query: 75 PA------LRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPS 128
P +G P PG+ ++G +P PP +P +P + PPP
Sbjct: 207 PPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRP 266
Query: 129 RRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPP 163
+ P PPGG P AG+ + PP
Sbjct: 267 Q--GPPPPGGN-------PQQPLPPPAGKPQGPPP 292
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 50.1 bits (118), Expect = 2e-06
Identities = 49/140 (35%), Positives = 53/140 (37%), Gaps = 27/140 (19%)
Query: 15 GGQGRHRH------SSRAPGTRTPATPA-------RSPRPPLCAPRPAPGRAQSPVPAAG 61
GG+GR R R PG P P PRPPL P P PG P P G
Sbjct: 200 GGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGP-PGPPGPPPP--G 256
Query: 62 AVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRP-- 119
V PP A P R G+ P P G+ PP P+ G G G P
Sbjct: 257 QVLPPPLAGPPNR----GDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312
Query: 120 --GKGPPPNPSRRLPPAPPG 137
G PPP P PP PPG
Sbjct: 313 QQGPPPPPGPF---PPRPPG 329
Score = 38.1 bits (87), Expect = 0.007
Identities = 40/137 (29%), Positives = 45/137 (32%), Gaps = 26/137 (18%)
Query: 23 SSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETP 82
S + G P S R GR VP P P P P G+TP
Sbjct: 177 SGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTP 236
Query: 83 ------APGRRG--RATTRGEVQPSVRPPLSHRPLRGG---------GMGRGRPGKG--- 122
PG G G+V P PPL+ P RG G G+P G
Sbjct: 237 PRPPLGPPGPPGPPGPPPPGQVLP---PPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLP 293
Query: 123 ---PPPNPSRRLPPAPP 136
PPP P PP PP
Sbjct: 294 PGPPPPVPGYGPPPGPP 310
Score = 32.3 bits (72), Expect = 0.40
Identities = 32/112 (28%), Positives = 39/112 (34%), Gaps = 27/112 (24%)
Query: 32 PATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPAPGRRGRAT 91
P P + P PP P P P R P+ + PP H P PAP
Sbjct: 309 PPPPQQGPPPP---PGPFPPRPPGPLGPPLTLAPPP---HLPGPPPGAPPPAP------- 355
Query: 92 TRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLPP------APPG 137
V P+ PP ++ GM PP +P R PP PPG
Sbjct: 356 ---HVNPAFFPPPTN-----SGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPG 399
Score = 32.3 bits (72), Expect = 0.40
Identities = 29/87 (33%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 25 RAPGTRTP----ATPARSPRPPLCAPRPAP--GRAQSPVPAAGAVPSPPAAAHPARPALR 78
R PG P A P P PP AP PAP A P P +P+ + P P
Sbjct: 326 RPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPP--PTDP 383
Query: 79 GETPAPGRRGRATTRGEVQPSVRPPLS 105
P P RG G + R PLS
Sbjct: 384 YGRPPPYDRGDYGPPGREMDTARTPLS 410
Score = 30.8 bits (68), Expect = 1.2
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 16/43 (37%)
Query: 112 GGMGRGR----------------PGKGPPPNPSRRLPPAPPGG 138
GG GRGR PG PPP P+ + PP PP G
Sbjct: 200 GGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLG 242
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 49.7 bits (117), Expect = 2e-06
Identities = 55/180 (30%), Positives = 68/180 (37%), Gaps = 34/180 (18%)
Query: 10 GGGGGGGQGRHRHSSRAPGTRT-------PATPARSPRPPLCAPRPAPGRAQSPVPAAGA 62
GG G G R + S R ++T P PA SP P P P+P A + A
Sbjct: 254 GGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPP 313
Query: 63 VPSPPAAAHPARPALRGETPAPGRR-GRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGK 121
P+PP P P L+ GR GRA+TR + +S + G G PG
Sbjct: 314 GPAPPITLEPPAPGLK-----RGREGGRASTRDR---KMLKFISGIFTKSTG---GPPGS 362
Query: 122 GPPPNPSRRLPPAPPG-GRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGRSEQHLR 180
GP P P P G G R L GA R V + +W RS LR
Sbjct: 363 GPLPGP----PSLSSGSGSRELL----------GAELRASPKAVINSQEWTLSRSIPELR 408
Score = 47.8 bits (112), Expect = 9e-06
Identities = 53/167 (31%), Positives = 61/167 (36%), Gaps = 29/167 (17%)
Query: 6 PHQQGGGGGGGQGRHR---HSSRAPGTRTPATPARSPRPPLCAPRPA-PGRAQSPVP--- 58
P G G+ RH H A T + PP +P PA P R SP P
Sbjct: 52 PGSPRGAEEPGKKRHERLFHRQDALWISTSSAGTGGAEPPALSPAPASPARPVSPAPGRR 111
Query: 59 -AAGAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRG 117
+ AVP P P G +P P G T S R PL P GG G
Sbjct: 112 LSLWAVP-------PGPPLSGGLSPDPKPGGAPT-------SSRRPLLSSPSWGGPEPEG 157
Query: 118 RPGKGPP----PNP---SRRLPPAPPGGRRTWLSALATGPAAGGAGR 157
R G G P P+P SRRL APP + T A G G+
Sbjct: 158 RAGGGIPGSSSPHPGTGSRRLKVAPPPPAPKPCKTVTTSGAKAGGGK 204
Score = 34.7 bits (78), Expect = 0.081
Identities = 33/99 (33%), Positives = 38/99 (38%), Gaps = 13/99 (13%)
Query: 64 PSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVR--PPLSHRP------LRGGGMG 115
PSP AAA A A ET PG + RG +P + L HR G G
Sbjct: 32 PSPSAAAAGAAGARGSETGDPG-----SPRGAEEPGKKRHERLFHRQDALWISTSSAGTG 86
Query: 116 RGRPGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGG 154
P P S P +P GRR L A+ GP G
Sbjct: 87 GAEPPALSPAPASPARPVSPAPGRRLSLWAVPPGPPLSG 125
Score = 33.5 bits (75), Expect = 0.18
Identities = 46/176 (26%), Positives = 58/176 (32%), Gaps = 28/176 (15%)
Query: 4 KRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQS-PVPAAGA 62
+RP GG + R PG+ +P S R + P PAP ++ A A
Sbjct: 141 RRPLLSSPSWGGPEPEGRAGGGIPGSSSPHPGTGSRRLKVAPPPPAPKPCKTVTTSGAKA 200
Query: 63 VPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPL-----SHRPLRGG-GMGR 116
A + + P G+ G + A T V + S GG G G
Sbjct: 201 GGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGA 260
Query: 117 GRPGK------------------GPPPN--PSRRLPPAP-PGGRRTWLSALATGPA 151
G GK GPP P LPP P P T SA GPA
Sbjct: 261 GARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPPGPA 316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,860,985
Number of Sequences: 37866
Number of extensions: 1239533
Number of successful extensions: 26709
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 2232
Number of HSP's that attempted gapping in prelim test: 10880
Number of HSP's gapped (non-prelim): 11244
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.