Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 169169054

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169169054 PREDICTED: hypothetical protein [Homo sapiens]
         (399 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169169054 PREDICTED: hypothetical protein [Homo sapiens]           813   0.0  
gi|169168706 PREDICTED: hypothetical protein [Homo sapiens]           813   0.0  
gi|169169649 PREDICTED: hypothetical protein [Homo sapiens]           813   0.0  
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ...    42   7e-04
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ...    42   7e-04
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ...    42   7e-04
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s...    41   0.002
gi|169208169 PREDICTED: similar to kinase D-interacting substrat...    40   0.003
gi|169208819 PREDICTED: similar to kinase D-interacting substrat...    40   0.004
gi|169208593 PREDICTED: similar to kinase D-interacting substrat...    40   0.004
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]            39   0.006
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]            39   0.006
gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo ...    39   0.011
gi|239753144 PREDICTED: hypothetical protein [Homo sapiens]            36   0.054
gi|239747710 PREDICTED: hypothetical protein XP_002348232 [Homo ...    36   0.054
gi|239741576 PREDICTED: hypothetical protein XP_002342255 [Homo ...    36   0.054
gi|42821110 hypothetical protein LOC340602 [Homo sapiens]              36   0.054
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         36   0.054
gi|239756356 PREDICTED: similar to hCG1731366 [Homo sapiens]           35   0.12 
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ...    35   0.12 
gi|169209261 PREDICTED: similar to hCG1731366 [Homo sapiens]           35   0.12 
gi|239745242 PREDICTED: similar to COMM domain containing 4 [Hom...    35   0.12 
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ...    35   0.12 
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]            35   0.12 
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       35   0.12 
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       35   0.12 
gi|31543543 retinoic acid induced 17 [Homo sapiens]                    35   0.16 
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    35   0.16 
gi|237757308 synaptojanin 1 isoform b [Homo sapiens]                   34   0.20 
gi|84993742 tripartite motif-containing 71 [Homo sapiens]              34   0.20 

>gi|169169054 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 399

 Score =  813 bits (2099), Expect = 0.0
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY 60
           MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY
Sbjct: 1   MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY 60

Query: 61  LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN 120
           LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN
Sbjct: 61  LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN 120

Query: 121 RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH 180
           RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH
Sbjct: 121 RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH 180

Query: 181 LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ 240
           LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ
Sbjct: 181 LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ 240

Query: 241 AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ 300
           AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ
Sbjct: 241 AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ 300

Query: 301 RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG 360
           RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG
Sbjct: 301 RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG 360

Query: 361 LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV 399
           LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV
Sbjct: 361 LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV 399


>gi|169168706 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 399

 Score =  813 bits (2099), Expect = 0.0
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY 60
           MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY
Sbjct: 1   MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY 60

Query: 61  LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN 120
           LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN
Sbjct: 61  LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN 120

Query: 121 RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH 180
           RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH
Sbjct: 121 RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH 180

Query: 181 LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ 240
           LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ
Sbjct: 181 LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ 240

Query: 241 AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ 300
           AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ
Sbjct: 241 AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ 300

Query: 301 RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG 360
           RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG
Sbjct: 301 RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG 360

Query: 361 LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV 399
           LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV
Sbjct: 361 LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV 399


>gi|169169649 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 399

 Score =  813 bits (2099), Expect = 0.0
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY 60
           MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY
Sbjct: 1   MKHLGTALGPKSLKQQCSVPMSIQATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVY 60

Query: 61  LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN 120
           LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN
Sbjct: 61  LGHALGEAVDLLRDAAELAVNAVGMAHLGYDHGLRHAQLQLGIEVIQTRLLLLERDSREN 120

Query: 121 RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH 180
           RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH
Sbjct: 121 RDPGAHASSGRCEIALQQRTEEAVGHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVH 180

Query: 181 LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ 240
           LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ
Sbjct: 181 LLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQ 240

Query: 241 AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ 300
           AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ
Sbjct: 241 AQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQ 300

Query: 301 RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG 360
           RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG
Sbjct: 301 RGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRG 360

Query: 361 LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV 399
           LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV
Sbjct: 361 LFSATPPSRVLRDSRHGLGEHTISYQIRFSTLPTQVISV 399


>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 41/155 (26%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 198 LRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRPLAA 257
           ++RR            V++   A  C    +A  +P +P    A LA R     +RP  A
Sbjct: 60  VKRRSGGFKSHSATERVERSRLARAC----YARRLPPRPTRSPAPLARRPGKPPRRPKGA 115

Query: 258 RGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQRGPRRRHSGRRAHLDGA 317
            G      P+ P   AP    QPP    +       +   Q  RGP     GR A   GA
Sbjct: 116 AGH-----PSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGP-----GRSARSAGA 165

Query: 318 ARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPS 352
           A PP   +       R  PR   A   +T  +  S
Sbjct: 166 AAPPAGGLAQARQARRRRPRAAAALTGRTHQRSRS 200


>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 41/155 (26%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 198 LRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRPLAA 257
           ++RR            V++   A  C    +A  +P +P    A LA R     +RP  A
Sbjct: 60  VKRRSGGFKSHSATERVERSRLARAC----YARRLPPRPTRSPAPLARRPGKPPRRPKGA 115

Query: 258 RGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQRGPRRRHSGRRAHLDGA 317
            G      P+ P   AP    QPP    +       +   Q  RGP     GR A   GA
Sbjct: 116 AGH-----PSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGP-----GRSARSAGA 165

Query: 318 ARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPS 352
           A PP   +       R  PR   A   +T  +  S
Sbjct: 166 AAPPAGGLAQARQARRRRPRAAAALTGRTHQRSRS 200


>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 41/155 (26%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 198 LRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRPLAA 257
           ++RR            V++   A  C    +A  +P +P    A LA R     +RP  A
Sbjct: 60  VKRRSGGFKSHSATERVERSRLARAC----YARRLPPRPTRSPAPLARRPGKPPRRPKGA 115

Query: 258 RGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQRGPRRRHSGRRAHLDGA 317
            G      P+ P   AP    QPP    +       +   Q  RGP     GR A   GA
Sbjct: 116 AGH-----PSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQRPRGP-----GRSARSAGA 165

Query: 318 ARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPS 352
           A PP   +       R  PR   A   +T  +  S
Sbjct: 166 AAPPAGGLAQARQARRRRPRAAAALTGRTHQRSRS 200


>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
            sapiens]
          Length = 2506

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 66/260 (25%), Positives = 91/260 (35%), Gaps = 64/260 (24%)

Query: 115  RDSRENRDPGAHASSGRCEIALQQRTEEAVGHP-PSQAQLPHLLEHIRHLQEDQAMEQQH 173
            RD R +R P    S GR  +A +Q +    G P PS +         R L +  +  + H
Sbjct: 2241 RDQRWSRSP----SEGREHMAHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPSTPRPH 2296

Query: 174  VQDAPVHLLALKVAKEVHGVGGPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVP 233
            V  +PV        ++  G G P  +++Q+           QQ+                
Sbjct: 2297 VSYSPV-------IRKAGGSGPPQQQQQQQ-----------QQQQ--------------- 2323

Query: 234  QKPDLHQAQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVH 293
                  Q  +A  GR A   P     RR+      P   A PLA   P       G H  
Sbjct: 2324 ------QQAVARPGRAATSGP-----RRY------PGPTAEPLAGDRPPT-----GGHSS 2361

Query: 294  EGHPQGQR---GPRRRHSGRRAHLDGAARPPL-PEIKGRASGPRNPPRRLKASPSQTRFK 349
               P+ +R   GP R  S R     GA  P   P +     GPR+      +   +    
Sbjct: 2362 GRSPRMERRVPGPARSESPRACRHGGARWPASGPHVSEGPPGPRHHGYYRGSDYDEADGP 2421

Query: 350  GPSGGEECRRGLFSATPPSR 369
            G  GGEE   G + A PP R
Sbjct: 2422 GSGGGEEAMAGAYDAPPPVR 2441


>gi|169208169 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 26/166 (15%)

Query: 196 PVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRPL 255
           P+L R  RA  G  G A    +++        H A   ++P+L ++     G    +   
Sbjct: 217 PLLARFARAAGGHGGEAGSAGKNSGR------HRAQGSERPELGRSMSLALGAVTEEEAA 270

Query: 256 AARGRRFLDFPAQPQVLAPP-------LAHQPPQLHRDHIGMHVH-EGHP-QGQRGPRRR 306
             R    +  P  PQ            L   PP L +  IG+  H EG P  G+ G RRR
Sbjct: 271 RLRAGALMALPNSPQSSGTGRWRSQEVLEGAPPTLAQAPIGLSPHPEGGPGSGRLGLRRR 330

Query: 307 HSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPS 352
            +           P +P + G A GP + P  L+A+       GP+
Sbjct: 331 STA----------PDIPSLVGEAPGPESGP-ELEANALSVSVPGPN 365


>gi|169208819 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 26/166 (15%)

Query: 196 PVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRPL 255
           P+L R  RA  G  G A    +++        H A   ++P+L ++     G    +   
Sbjct: 217 PLLARFARAAGGHGGEAGSAGKNSGR------HRAQGSERPELGRSMSLALGAVTEEEAA 270

Query: 256 AARGRRFLDFPAQPQVLAPP-------LAHQPPQLHRDHIGMHVH-EGHP-QGQRGPRRR 306
             R    +  P  PQ            L   PP L +  IG+  H EG P  G+ G RRR
Sbjct: 271 RLRAGALMALPNSPQSSGTGRWRSQEVLEGAPPTLAQAPIGLSPHPEGGPGSGRLGLRRR 330

Query: 307 HSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPS 352
            +           P +P + G A GP + P  L+A+       GP+
Sbjct: 331 STA----------PDIPSLVGEAPGPESGP-ELEANALPVSVPGPN 365


>gi|169208593 PREDICTED: similar to kinase D-interacting substrate
           220 [Homo sapiens]
          Length = 380

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 26/166 (15%)

Query: 196 PVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRPL 255
           P+L R  RA  G  G A    +++        H A   ++P+L ++     G    +   
Sbjct: 217 PLLARFARAAGGHGGEAGSAGKNSGR------HRAQGSERPELGRSMSLALGAVTEEEAA 270

Query: 256 AARGRRFLDFPAQPQVLAPP-------LAHQPPQLHRDHIGMHVH-EGHP-QGQRGPRRR 306
             R    +  P  PQ            L   PP L +  IG+  H EG P  G+ G RRR
Sbjct: 271 RLRAGALMALPNSPQSSGTGRWRSQEVLEGAPPTLAQAPIGLSPHPEGGPGSGRLGLRRR 330

Query: 307 HSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPS 352
            +           P +P + G A GP + P  L+A+       GP+
Sbjct: 331 STA----------PDIPSLVGEAPGPESGP-ELEANALPVSVPGPN 365


>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 58/186 (31%), Positives = 67/186 (36%), Gaps = 35/186 (18%)

Query: 195 GPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRP 254
           GP+ RR   +CSGR G+A        L C     AAA      L  AQ  G  R  AQ P
Sbjct: 99  GPLGRRA--SCSGRAGSA------GRLRC----SAAA------LSAAQRGGPAR--AQVP 138

Query: 255 LAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMH------VHEGHPQGQRGPRRRHS 308
            A R   F   PA P   +P    +P    R   G        +H G P        R  
Sbjct: 139 PALR--TFSPGPASPPRASP--GGRPGSEARGRSGAECARRVPLHHGPPGASGVGSERDR 194

Query: 309 GRRAHLDGAARPPLPEIKGRASGP-----RNPPRRLKASPSQTRFKGPSGGEECRRGLFS 363
             + H   A  PP P I G   GP      N   R     S +R  G +GGE   R L  
Sbjct: 195 KFQLHQTPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERPARALRR 254

Query: 364 ATPPSR 369
              P R
Sbjct: 255 PRAPGR 260



 Score = 33.5 bits (75), Expect = 0.35
 Identities = 42/149 (28%), Positives = 53/149 (35%), Gaps = 28/149 (18%)

Query: 244 AGRGRGAAQRPLAARGRRFLDFPAQP--QVLAPPLAHQPP-------QLHRDHIGMHVHE 294
           AG G    +RP   RG      P  P  +V APP A  PP       +  R   G+    
Sbjct: 38  AGAGSKLWRRP---RGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGA 94

Query: 295 GHPQGQRGPRRRHSGRR---------------AHLDGAARPPLPE-IKGRASGPRNPPRR 338
               G  G R   SGR                A   G AR  +P  ++  + GP +PPR 
Sbjct: 95  FVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRA 154

Query: 339 LKASPSQTRFKGPSGGEECRRGLFSATPP 367
                  +  +G SG E  RR      PP
Sbjct: 155 SPGGRPGSEARGRSGAECARRVPLHHGPP 183


>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 58/186 (31%), Positives = 67/186 (36%), Gaps = 35/186 (18%)

Query: 195 GPVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRP 254
           GP+ RR   +CSGR G+A        L C     AAA      L  AQ  G  R  AQ P
Sbjct: 99  GPLGRRA--SCSGRAGSA------GRLRC----SAAA------LSAAQRGGPAR--AQVP 138

Query: 255 LAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMH------VHEGHPQGQRGPRRRHS 308
            A R   F   PA P   +P    +P    R   G        +H G P        R  
Sbjct: 139 PALR--TFSPGPASPPRASP--GGRPGSEARGRSGAECARRVPLHHGPPGASGVGSERDR 194

Query: 309 GRRAHLDGAARPPLPEIKGRASGP-----RNPPRRLKASPSQTRFKGPSGGEECRRGLFS 363
             + H   A  PP P I G   GP      N   R     S +R  G +GGE   R L  
Sbjct: 195 KFQLHQTPARGPPFPGISGMTRGPVVLSGVNRQHRWPPGASPSRSLGEAGGERPARALRR 254

Query: 364 ATPPSR 369
              P R
Sbjct: 255 PRAPGR 260



 Score = 33.5 bits (75), Expect = 0.35
 Identities = 42/149 (28%), Positives = 53/149 (35%), Gaps = 28/149 (18%)

Query: 244 AGRGRGAAQRPLAARGRRFLDFPAQP--QVLAPPLAHQPP-------QLHRDHIGMHVHE 294
           AG G    +RP   RG      P  P  +V APP A  PP       +  R   G+    
Sbjct: 38  AGAGSKLWRRP---RGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGA 94

Query: 295 GHPQGQRGPRRRHSGRR---------------AHLDGAARPPLPE-IKGRASGPRNPPRR 338
               G  G R   SGR                A   G AR  +P  ++  + GP +PPR 
Sbjct: 95  FVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRA 154

Query: 339 LKASPSQTRFKGPSGGEECRRGLFSATPP 367
                  +  +G SG E  RR      PP
Sbjct: 155 SPGGRPGSEARGRSGAECARRVPLHHGPP 183


>gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo
           sapiens]
          Length = 351

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 46/144 (31%), Positives = 54/144 (37%), Gaps = 18/144 (12%)

Query: 221 LLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAP--PLAH 278
           LL LP   A  +P  P    A  A       +RP  A        PA    + P  PL H
Sbjct: 148 LLELPFGQAGGIPLYPRAAPAPAARPSPDPGRRPPPAA-------PAPVVHVGPVLPLLH 200

Query: 279 QPPQLHRDHIGMHVHEGHPQGQRGPRR---RHSGRRAHLDGAARPPLPEIKGRASGPRNP 335
            P  +    +G H      + +  PRR   R    R    GAAR  LPE   R   PR  
Sbjct: 201 DPVGVPLAPLG-HGGVDWAENKERPRRLRLRSQRFRPPSPGAARSQLPETARR---PRPR 256

Query: 336 PRRLKASPSQTRFKGPSGGEECRR 359
           PR   A P + R   P  G  CRR
Sbjct: 257 PR--PALPRRAREPQPGSGRRCRR 278


>gi|239753144 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 407

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 23/131 (17%)

Query: 177 APVHLLALKVAKEVH----------GVGGPVLRRRQRACSGR-DGAALVQQEDTALLCLP 225
           AP+HL  L+V  E H          G G PV   R     G  DGA  +Q    A     
Sbjct: 287 APLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQAD 346

Query: 226 ADHAAAVP-QKPDLHQAQLAGRGRGAAQRP-LAARGRRFLDFPAQPQVLAPPLAHQPPQL 283
            ++ A  P Q  +   ++LA R R + Q P   ARGR        P+ L PPL  QP  L
Sbjct: 347 LENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGR-------GPE-LPPPLPQQP--L 396

Query: 284 HRDHIGMHVHE 294
              H G H  E
Sbjct: 397 AHMHSGQHRQE 407


>gi|239747710 PREDICTED: hypothetical protein XP_002348232 [Homo
           sapiens]
          Length = 407

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 23/131 (17%)

Query: 177 APVHLLALKVAKEVH----------GVGGPVLRRRQRACSGR-DGAALVQQEDTALLCLP 225
           AP+HL  L+V  E H          G G PV   R     G  DGA  +Q    A     
Sbjct: 287 APLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQAD 346

Query: 226 ADHAAAVP-QKPDLHQAQLAGRGRGAAQRP-LAARGRRFLDFPAQPQVLAPPLAHQPPQL 283
            ++ A  P Q  +   ++LA R R + Q P   ARGR        P+ L PPL  QP  L
Sbjct: 347 LENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGR-------GPE-LPPPLPQQP--L 396

Query: 284 HRDHIGMHVHE 294
              H G H  E
Sbjct: 397 AHMHSGQHRQE 407


>gi|239741576 PREDICTED: hypothetical protein XP_002342255 [Homo
           sapiens]
          Length = 407

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 23/131 (17%)

Query: 177 APVHLLALKVAKEVH----------GVGGPVLRRRQRACSGR-DGAALVQQEDTALLCLP 225
           AP+HL  L+V  E H          G G PV   R     G  DGA  +Q    A     
Sbjct: 287 APLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQAD 346

Query: 226 ADHAAAVP-QKPDLHQAQLAGRGRGAAQRP-LAARGRRFLDFPAQPQVLAPPLAHQPPQL 283
            ++ A  P Q  +   ++LA R R + Q P   ARGR        P+ L PPL  QP  L
Sbjct: 347 LENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGR-------GPE-LPPPLPQQP--L 396

Query: 284 HRDHIGMHVHE 294
              H G H  E
Sbjct: 397 AHMHSGQHRQE 407


>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
          Length = 503

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 51/194 (26%), Positives = 69/194 (35%), Gaps = 37/194 (19%)

Query: 196 PVLRRRQRACSGRDGAALVQQEDTALLCLPADHAAAVPQKPDLHQAQLAGRGRGAAQRPL 255
           P  R     CSG   ++   Q   ALL   ++   A   +  L  + L  R  G      
Sbjct: 177 PGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVASALRRRASGPGP--- 233

Query: 256 AARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQRGPRRRHSGRRAHLD 315
             RG       AQP    P   H+   L    +        P+   GP RR    RA + 
Sbjct: 234 VIRG-----CTAQP---GPAFPHRATHLDPARLS-------PESAPGPARRG---RASVP 275

Query: 316 GAAR-----PPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECRRGLFSATPPSRV 370
           G AR      P P  +GR S P + PR   ++P   R           RG  SA  P+  
Sbjct: 276 GPARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSAR-----------RGRDSAPGPALR 324

Query: 371 LRDSRHGLGEHTIS 384
           +R +R   G  + S
Sbjct: 325 VRTARSDAGHRSTS 338


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 31/103 (30%), Positives = 39/103 (37%), Gaps = 17/103 (16%)

Query: 269 PQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQRGPRRRHSGRRAHLDGAARPPLPEIKGR 328
           P+   PP    PP  HR               R P RR     A L G++          
Sbjct: 323 PRRRTPPRRMPPPPRHRR-------------SRSPVRRRRRSSASLSGSSSSS--SSSRS 367

Query: 329 ASGPRNPPRRLKASPSQTRFKGPSGGEECRRGLFS--ATPPSR 369
            S P+ PP+R  + P +TR   PS     RR   S  ATPP +
Sbjct: 368 RSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPK 410



 Score = 34.7 bits (78), Expect = 0.16
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 299 GQRGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPSGGEECR 358
           G+ G RRRHS  R+        P P  + + + PR   RR  + P   R + PS     R
Sbjct: 515 GEVGRRRRHSPSRS------ASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPR 568

Query: 359 RGLFSATPPSR 369
           R      PP R
Sbjct: 569 RRRTPTPPPRR 579



 Score = 29.3 bits (64), Expect = 6.6
 Identities = 45/164 (27%), Positives = 64/164 (39%), Gaps = 27/164 (16%)

Query: 225 PADHAAAVPQKPDLHQAQLAGRGRGA-AQRPLAARGRRFLDFPAQPQVLAPPLAHQ---- 279
           P+  A+  P+K    Q + + RGR   +  P   R RR       P    PP   +    
Sbjct: 525 PSRSASPSPRK---RQKETSPRGRRRRSPSPPPTRRRR------SPSPAPPPRRRRTPTP 575

Query: 280 PPQLHRDHIGMHVHEGHPQGQRGP-RRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRR 338
           PP+              P+    P +RR+S         A PP P  K RAS    P RR
Sbjct: 576 PPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP-KRRASPSPPPKRR 634

Query: 339 LKASPSQ-------TRFKGPSGGEECRRGLFSATPPSRVLRDSR 375
           +  SP         T+ + PS   + R+G    + PSR  R++R
Sbjct: 635 VSHSPPPKQRSSPVTKRRSPSLSSKHRKG----SSPSRSTREAR 674


>gi|239756356 PREDICTED: similar to hCG1731366 [Homo sapiens]
          Length = 344

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 24/155 (15%)

Query: 240 QAQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEG---- 295
           + +L      A Q P A   R  L F AQ         H+P +L R  +G H H G    
Sbjct: 2   ETELVAEDWNAKQVPPAFWLRDILCFQAQTYTCC----HKPLRLFRGPMGSHTHAGPACW 57

Query: 296 ---HPQGQ-------RGPRRRHSG------RRAHLDGAARPPLPEIKGRASGPRNPPRRL 339
              HP          + P++R          + H+   +  PL  ++G+ SG R   R+ 
Sbjct: 58  AHLHPGDSSLISPWAKYPKQRPGQGVFIRVPKKHMQKGSACPLWPVRGKDSGRRRRRRQH 117

Query: 340 KASPSQTRFKGPSGGEECRRGLFSATPPSRVLRDS 374
            A  + +  +   G       L  A  PS+V+ DS
Sbjct: 118 FAPGTSSGLRSAPGLTRAGPALPEAVSPSQVIVDS 152


>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
           sapiens]
          Length = 384

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 38/129 (29%), Positives = 48/129 (37%), Gaps = 13/129 (10%)

Query: 230 AAVPQKPDLHQAQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIG 289
           +AVP +P  HQ+       G+  RP AA G R    P      A P    P    R   G
Sbjct: 104 SAVPPRPSQHQS-------GSRLRP-AAPGPR----PGCSSARASPAPAAPQAAARTAPG 151

Query: 290 MHVHEGHPQGQRGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNP-PRRLKASPSQTRF 348
                G   G RG      G R    G   PPL   + RA+  R+  P R    P ++R 
Sbjct: 152 RAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRP 211

Query: 349 KGPSGGEEC 357
              +G   C
Sbjct: 212 GSGTGARSC 220


>gi|169209261 PREDICTED: similar to hCG1731366 [Homo sapiens]
          Length = 456

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 24/155 (15%)

Query: 240 QAQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEG---- 295
           + +L      A Q P A   R  L F AQ         H+P +L R  +G H H G    
Sbjct: 2   ETELVAEDWNAKQVPPAFWLRDILCFQAQTYTCC----HKPLRLFRGPMGSHTHAGPACW 57

Query: 296 ---HPQGQ-------RGPRRRHSG------RRAHLDGAARPPLPEIKGRASGPRNPPRRL 339
              HP          + P++R          + H+   +  PL  ++G+ SG R   R+ 
Sbjct: 58  AHLHPGDSSLISPWAKYPKQRPGQGVFIRVPKKHMQKGSACPLWPVRGKDSGRRRRRRQH 117

Query: 340 KASPSQTRFKGPSGGEECRRGLFSATPPSRVLRDS 374
            A  + +  +   G       L  A  PS+V+ DS
Sbjct: 118 FAPGTSSGLRSAPGLTRAGPALPEAVSPSQVIVDS 152


>gi|239745242 PREDICTED: similar to COMM domain containing 4 [Homo
           sapiens]
          Length = 344

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 24/155 (15%)

Query: 240 QAQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIGMHVHEG---- 295
           + +L      A Q P A   R  L F AQ         H+P +L R  +G H H G    
Sbjct: 2   ETELVAEDWNAKQVPPAFWLRDILCFQAQTYTCC----HKPLRLFRGPMGSHTHAGPACW 57

Query: 296 ---HPQGQ-------RGPRRRHSG------RRAHLDGAARPPLPEIKGRASGPRNPPRRL 339
              HP          + P++R          + H+   +  PL  ++G+ SG R   R+ 
Sbjct: 58  AHLHPGDSSLISPWAKYPKQRPGQGVFIRVPKKHMQKGSACPLWPVRGKDSGRRRRRRQH 117

Query: 340 KASPSQTRFKGPSGGEECRRGLFSATPPSRVLRDS 374
            A  + +  +   G       L  A  PS+V+ DS
Sbjct: 118 FAPGTSSGLRSAPGLTRAGPALPEAVSPSQVIVDS 152


>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
           sapiens]
          Length = 384

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 38/129 (29%), Positives = 48/129 (37%), Gaps = 13/129 (10%)

Query: 230 AAVPQKPDLHQAQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIG 289
           +AVP +P  HQ+       G+  RP AA G R    P      A P    P    R   G
Sbjct: 104 SAVPPRPSQHQS-------GSRLRP-AAPGPR----PGCSSARASPAPAAPQAAARTAPG 151

Query: 290 MHVHEGHPQGQRGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNP-PRRLKASPSQTRF 348
                G   G RG      G R    G   PPL   + RA+  R+  P R    P ++R 
Sbjct: 152 RAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRP 211

Query: 349 KGPSGGEEC 357
              +G   C
Sbjct: 212 GSGTGARSC 220


>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 38/129 (29%), Positives = 48/129 (37%), Gaps = 13/129 (10%)

Query: 230 AAVPQKPDLHQAQLAGRGRGAAQRPLAARGRRFLDFPAQPQVLAPPLAHQPPQLHRDHIG 289
           +AVP +P  HQ+       G+  RP AA G R    P      A P    P    R   G
Sbjct: 104 SAVPPRPSQHQS-------GSRLRP-AAPGPR----PGCSSARASPAPAAPQAAARTAPG 151

Query: 290 MHVHEGHPQGQRGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNP-PRRLKASPSQTRF 348
                G   G RG      G R    G   PPL   + RA+  R+  P R    P ++R 
Sbjct: 152 RAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRP 211

Query: 349 KGPSGGEEC 357
              +G   C
Sbjct: 212 GSGTGARSC 220


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 269 PQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQRGPRRRHSGRRAHLDGAAR-PPLPEIKG 327
           PQ   PPL  +PP   + H+      G P G   P+R  S   A    A++  P  + +G
Sbjct: 474 PQRQGPPLQQRPPPQGQQHLS---GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQG 530

Query: 328 R-----ASGPRNPP-RRLKASPSQTRFKGP 351
           R     A GP  PP  R  ASPS  R  GP
Sbjct: 531 RQSRPVAGGPGAPPAARPPASPSPQRQAGP 560


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 269 PQVLAPPLAHQPPQLHRDHIGMHVHEGHPQGQRGPRRRHSGRRAHLDGAAR-PPLPEIKG 327
           PQ   PPL  +PP   + H+      G P G   P+R  S   A    A++  P  + +G
Sbjct: 474 PQRQGPPLQQRPPPQGQQHLS---GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQG 530

Query: 328 R-----ASGPRNPP-RRLKASPSQTRFKGP 351
           R     A GP  PP  R  ASPS  R  GP
Sbjct: 531 RQSRPVAGGPGAPPAARPPASPSPQRQAGP 560


>gi|31543543 retinoic acid induced 17 [Homo sapiens]
          Length = 1067

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 34/113 (30%), Positives = 41/113 (36%), Gaps = 25/113 (22%)

Query: 264  DFPAQPQVLAPPLAHQPPQLHRDHIGMH----------VHEGHPQGQRGPRRRHSGRRAH 313
            D P     L  PL+H P Q    H G            +H  HP  Q GP   HSG    
Sbjct: 926  DMPNNMAALEKPLSH-PMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSG---- 980

Query: 314  LDGAARPPLPEIKGRASGPRNPPRRLKAS-PSQTRFKGPSGGEECRRGLFSAT 365
                A PP P     +  PR PP+   +S P       PS   E + G   A+
Sbjct: 981  ----APPPPP-----SQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGAS 1024


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 38/127 (29%), Positives = 44/127 (34%), Gaps = 29/127 (22%)

Query: 274  PPLAHQPPQLHRDHIGMHVHEGHPQGQRGPRRRHSGRRAHLDGAARPPLPEIKGRASGPR 333
            PP  H PP  H      H H   PQ    P   H          A PP P        P 
Sbjct: 994  PPAHHHPPHHH------HHHAPPPQ----PHHHH----------AHPPHPPEMETGGSPD 1033

Query: 334  NPPRRLKASPSQTRFKGPSGGEECRRGLFSATP--PSRVLRDSRHGLGEHTISYQIRFST 391
            +PP RL   P Q   +G  GG        S TP  PS     S  G G  +    +R+  
Sbjct: 1034 DPPPRLALGP-QPSLRGWRGGGP------SPTPGAPSPSHHGSAGGGGGSSQGPALRYFQ 1086

Query: 392  LPTQVIS 398
            LP +  S
Sbjct: 1087 LPPRAAS 1093


>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
          Length = 1350

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 50/188 (26%), Positives = 68/188 (36%), Gaps = 38/188 (20%)

Query: 188  KEVHGVGGP----VLRRRQRA-----CSGRDGAALVQQEDTALLCLP--ADHAAAVP--- 233
            KE  G+G P    V RR   A      + +D     Q    A L  P  A ++ A P   
Sbjct: 1179 KEFGGIGAPPSPGVARREMEAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIP 1238

Query: 234  ------QKPDLHQAQLAGRGRGAAQRPLA--ARGRRFLDFPAQPQVLAPPLAHQPPQLHR 285
                    P  H    AGR    +Q   +  ++G  FL  P +PQ   PP +  PP   R
Sbjct: 1239 PRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQR 1298

Query: 286  DHIGMHVHEGHPQGQRGPRRRHSGRRAHLDGAARPPLPEIKGRASGPRNPPRRLKASPSQ 345
                + V    P  Q GP+               PP P  + R+S   + P    + P Q
Sbjct: 1299 LQEPL-VPVAAPMPQSGPQ----------PNLETPPQPPPRSRSS--HSLPSEASSQPQQ 1345

Query: 346  TRFKGPSG 353
             +   PSG
Sbjct: 1346 EQ---PSG 1350


>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
          Length = 868

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 295 GHPQGQRG-PRRRHSGRRAH-LDGAARPPLPEIKGRASGPRNPPRRLKASPSQTRFKGPS 352
           G P G  G    RH    AH    A+ PPLP+     +  R+ P    ASPS    + P 
Sbjct: 138 GAPAGAGGHSNHRHHAHHAHPRASASAPPLPQAPQPPAPSRSAPGGPAASPSALLLRRPH 197

Query: 353 GGEECRRG 360
           G   C  G
Sbjct: 198 GCSSCDEG 205


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,700,776
Number of Sequences: 37866
Number of extensions: 1030012
Number of successful extensions: 3955
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 3824
Number of HSP's gapped (non-prelim): 276
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press