LOC440292 18330

Name: LOC440292	Sequence: fasta or formatted (344aa)		NCBI GI: 239745242
Description: PREDICTED: similar to COMM domain containing 4		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [456aa] PREDICTED: similar to hCG1731366 alt prot [344aa] PREDICTED: similar to hCG1731366
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 33 2 C cysteine 3.5 12 2 D aspartate 5.5 19 1 E glutamate 4.9 17 2 F phenylalanine 3.2 11 1 G glycine 8.1 28 2 H histidine 3.5 12 1 I isoleucine 2.6 9 1 K lysine 7.0 24 2 L leucine 9.9 34 2 M methionine 1.5 5 1 N asparagine 0.9 3 1 P proline 6.7 23 2 Q glutamine 6.7 23 2 R arginine 5.8 20 6 S serine 8.7 30 2 T threonine 3.5 12 1 V valine 5.2 18 1 W tryptophan 2.0 7 1 Y tyrosine 1.2 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to COMM domain containing 4 [Hom... LOC440292 0.997 PREDICTED: similar to hCG1731366 LOC440292 0.817 PREDICTED: similar to hCG1731366 COMMD4 0.316 COMM domain containing 4 LOC646670 0.301 PREDICTED: similar to COMM domain containing 4 [Hom... LOC646670 0.281 PREDICTED: similar to COMM domain containing 4 [Hom... ZP3 0.020 zona pellucida glycoprotein 3 isoform 1 precursor [... ZP3 0.020 zona pellucida glycoprotein 3 isoform 2 LOC100131283 0.015 PREDICTED: hypothetical protein LOC100131283 0.015 PREDICTED: hypothetical protein LOC100131283 0.015 PREDICTED: hypothetical protein EMILIN2 0.012 elastin microfibril interfacer 2 FOXQ1 0.010 forkhead box Q1 LOC100290649 0.010 PREDICTED: hypothetical protein XP_002348220 LOC100289318 0.010 PREDICTED: hypothetical protein XP_002343871 SKIL 0.009 SKI-like isoform 3 SKIL 0.009 SKI-like isoform 2 SKIL 0.009 SKI-like isoform 1 LOC441009 0.009 PREDICTED: hypothetical protein LOC441009 0.009 PREDICTED: hypothetical protein LOC441009 0.009 PREDICTED: hypothetical protein TPM2 0.009 tropomyosin 2 (beta) isoform 3 RSC1A1 0.009 regulatory solute carrier protein, family 1, member 1... BMS1 0.007 BMS1-like, ribosome assembly protein C2orf55 0.007 hypothetical protein LOC343990 UBE4B 0.007 ubiquitination factor E4B isoform 2 UBE4B 0.007 ubiquitination factor E4B isoform 1 TUBGCP6 0.007 tubulin, gamma complex associated protein 6 LOC100292513 0.007 PREDICTED: hypothetical protein LOC100290082 0.007 PREDICTED: hypothetical protein XP_002347925 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.